RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
DDR1-228ENST00000376575 C22orf24Q9Y442 160 aa12.35□□□□□ -0.43
DDR1-228ENST00000376575 M0QXV9 152 aa12.34□□□□□ -0.43
DDR1-228ENST00000376575 PRR3P79522 188 aaKnown RBP12.33□□□□□ -0.44
DDR1-228ENST00000376575 ANKRD39Q53RE8 183 aa12.33□□□□□ -0.44
DDR1-228ENST00000376575 MEIG1Q5JSS6 88 aa12.33□□□□□ -0.44
DDR1-228ENST00000376575 KRTAP11-1Q8IUC1 163 aa12.33□□□□□ -0.44
DDR1-228ENST00000376575 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
DDR1-228ENST00000376575 MIR7-3HGQ8N6C7 128 aa12.32□□□□□ -0.44
DDR1-228ENST00000376575 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
DDR1-228ENST00000376575 A0A0U1RRA0 63 aa12.31□□□□□ -0.44
DDR1-228ENST00000376575 VPREB1P12018 145 aa12.31□□□□□ -0.44
DDR1-228ENST00000376575 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
DDR1-228ENST00000376575 Q8NDZ9 215 aa12.31□□□□□ -0.44
DDR1-228ENST00000376575 HNRNPA3P51991 378 aaKnown RBP12.29□□□□□ -0.44
DDR1-228ENST00000376575 MRPL55Q7Z7F7 128 aaKnown RBP12.29□□□□□ -0.44
DDR1-228ENST00000376575 TTTY13Q9BZ97 58 aa12.29□□□□□ -0.44
DDR1-228ENST00000376575 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
DDR1-228ENST00000376575 MYCBP2O75592 4640 aa12.29□□□□□ -0.44
DDR1-228ENST00000376575 INAFM2P0DMQ5 153 aa12.28□□□□□ -0.44
DDR1-228ENST00000376575 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
DDR1-228ENST00000376575 LITAFQ99732 161 aa12.28□□□□□ -0.44
DDR1-228ENST00000376575 FLG2Q5D862 2391 aaPredicted RBP12.27□□□□□ -0.44
DDR1-228ENST00000376575 ZNF815PA8K554 130 aa12.27□□□□□ -0.45
DDR1-228ENST00000376575 TIMM17BO60830 172 aa12.26□□□□□ -0.45
DDR1-228ENST00000376575 RPL24P83731 157 aaKnown RBP12.26□□□□□ -0.45
DDR1-228ENST00000376575 ADAMTSL4-AS1Q5T5F5 129 aa12.26□□□□□ -0.45
DDR1-228ENST00000376575 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
DDR1-228ENST00000376575 SCGB1D1O95968 90 aa12.25□□□□□ -0.45
DDR1-228ENST00000376575 DAND5Q8N907 189 aa12.25□□□□□ -0.45
DDR1-228ENST00000376575 FAT3Q8TDW7 4589 aa12.24□□□□□ -0.45
DDR1-228ENST00000376575 PCP2Q8IVA1 136 aa12.24□□□□□ -0.45
DDR1-228ENST00000376575 TMA7Q9Y2S6 64 aaKnown RBP12.24□□□□□ -0.45
DDR1-228ENST00000376575 UBE2BP63146 152 aa12.23□□□□□ -0.45
DDR1-228ENST00000376575 SRSF9Q13242 221 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDR1-228ENST00000376575 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
DDR1-228ENST00000376575 LRP1Q07954 4544 aaKnown RBP12.23□□□□□ -0.45
DDR1-228ENST00000376575 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
DDR1-228ENST00000376575 JOSD1Q15040 202 aaPredicted RBP12.21□□□□□ -0.45
DDR1-228ENST00000376575 SOSTDC1Q6X4U4 206 aa12.21□□□□□ -0.45
DDR1-228ENST00000376575 HSBP1L1C9JCN9 74 aa12.2□□□□□ -0.46
DDR1-228ENST00000376575 EIF4EBP3O60516 100 aaPredicted RBP12.2□□□□□ -0.46
DDR1-228ENST00000376575 C1orf137Q5JT78 98 aa12.2□□□□□ -0.46
DDR1-228ENST00000376575 IGLV1-50A0A075B6I6 118 aa12.19□□□□□ -0.46
DDR1-228ENST00000376575 GAGE10A6NGK3 116 aa12.18□□□□□ -0.46
DDR1-228ENST00000376575 RPL37AP8A6NKH3 93 aa12.18□□□□□ -0.46
DDR1-228ENST00000376575 M0R378 163 aa12.17□□□□□ -0.46
DDR1-228ENST00000376575 NDUFC2O95298 119 aa12.17□□□□□ -0.46
DDR1-228ENST00000376575 IGLV7-43P04211 117 aa12.17□□□□□ -0.46
DDR1-228ENST00000376575 SPINK6Q6UWN8 80 aa12.16□□□□□ -0.46
DDR1-228ENST00000376575 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
DDR1-228ENST00000376575 SPANXDQ9BXN6 97 aa12.16□□□□□ -0.46
DDR1-228ENST00000376575 SPANXCQ9NY87 97 aa12.16□□□□□ -0.46
DDR1-228ENST00000376575 SCGB1D4Q6XE38 83 aa12.15□□□□□ -0.46
DDR1-228ENST00000376575 TRBV10-2A0A0K0K1G8 114 aa12.14□□□□□ -0.47
DDR1-228ENST00000376575 MIEN1Q9BRT3 115 aa12.14□□□□□ -0.47
DDR1-228ENST00000376575 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
DDR1-228ENST00000376575 IGKV2-28A0A075B6P5 120 aa12.13□□□□□ -0.47
DDR1-228ENST00000376575 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
DDR1-228ENST00000376575 IGKV2D-28P01615 120 aa12.13□□□□□ -0.47
DDR1-228ENST00000376575 PYY3Q5JQD4 70 aa12.13□□□□□ -0.47
DDR1-228ENST00000376575 BCE1O60756 84 aa12.12□□□□□ -0.47
DDR1-228ENST00000376575 Q6ZVH6 145 aa12.12□□□□□ -0.47
DDR1-228ENST00000376575 SPANXB1Q9NS25 103 aaPredicted RBP12.12□□□□□ -0.47
DDR1-228ENST00000376575 NCR3O14931 201 aa12.11□□□□□ -0.47
DDR1-228ENST00000376575 COX8AP10176 69 aa12.11□□□□□ -0.47
DDR1-228ENST00000376575 NPC2P61916 151 aa12.11□□□□□ -0.47
DDR1-228ENST00000376575 DLEU1O43261 78 aa12.1□□□□□ -0.47
DDR1-228ENST00000376575 KRTAP13-1Q8IUC0 172 aa12.1□□□□□ -0.47
DDR1-228ENST00000376575 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
DDR1-228ENST00000376575 ZNF861PO60384 105 aa12.09□□□□□ -0.47
DDR1-228ENST00000376575 TMEM126AQ9H061 195 aa12.09□□□□□ -0.47
DDR1-228ENST00000376575 KCNQ1DNQ9H478 68 aa12.09□□□□□ -0.47
DDR1-228ENST00000376575 TNXBP22105 4242 aa12.09□□□□□ -0.47
DDR1-228ENST00000376575 IFITM1P13164 125 aa12.08□□□□□ -0.48
DDR1-228ENST00000376575 REG3GQ6UW15 175 aa12.08□□□□□ -0.48
DDR1-228ENST00000376575 TRBV10-3A0A0K0K1G6 114 aa12.07□□□□□ -0.48
DDR1-228ENST00000376575 OXTP01178 125 aa12.07□□□□□ -0.48
DDR1-228ENST00000376575 IGLV6-57P01721 117 aa12.07□□□□□ -0.48
DDR1-228ENST00000376575 SPRR1AP35321 89 aa12.07□□□□□ -0.48
DDR1-228ENST00000376575 SPATA45Q537H7 98 aa12.07□□□□□ -0.48
DDR1-228ENST00000376575 VAMP8Q9BV40 100 aa12.07□□□□□ -0.48
DDR1-228ENST00000376575 PAM16Q9Y3D7 125 aa12.07□□□□□ -0.48
DDR1-228ENST00000376575 PRYO14603 147 aa12.05□□□□□ -0.48
DDR1-228ENST00000376575 COPS9Q8WXC6 57 aa12.05□□□□□ -0.48
DDR1-228ENST00000376575 DIRC1Q969H9 104 aa12.05□□□□□ -0.48
DDR1-228ENST00000376575 KRTAP4-16G5E9R7 235 aaPredicted RBP12.04□□□□□ -0.48
DDR1-228ENST00000376575 H0Y9J4 135 aa12.04□□□□□ -0.48
DDR1-228ENST00000376575 DDTP30046 118 aa12.03□□□□□ -0.48
DDR1-228ENST00000376575 MUSTN1Q8IVN3 82 aa12.03□□□□□ -0.48
DDR1-228ENST00000376575 RPL28P46779 137 aaKnown RBP12.02□□□□□ -0.49
DDR1-228ENST00000376575 C14orf144Q96I85 54 aa12.02□□□□□ -0.49
DDR1-228ENST00000376575 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
DDR1-228ENST00000376575 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
DDR1-228ENST00000376575 LINC01600Q96MT4 127 aa12□□□□□ -0.49
DDR1-228ENST00000376575 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
DDR1-228ENST00000376575 S100A7L2Q5SY68 101 aa11.99□□□□□ -0.49
DDR1-228ENST00000376575 KRTAP1-4P0C5Y4 121 aa11.98□□□□□ -0.49
DDR1-228ENST00000376575 UBE2AP49459 152 aa11.98□□□□□ -0.49
DDR1-228ENST00000376575 FAM19A1Q7Z5A9 133 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms