RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 A0A1W2PNN7 141 aa10.34□□□□□ -0.75
H2AFX-201ENST00000375167 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
H2AFX-201ENST00000375167 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.34□□□□□ -0.75
H2AFX-201ENST00000375167 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
H2AFX-201ENST00000375167 LINC00518Q8N0U6 118 aa10.34□□□□□ -0.75
H2AFX-201ENST00000375167 TOMM7Q9P0U1 55 aa10.34□□□□□ -0.75
H2AFX-201ENST00000375167 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
H2AFX-201ENST00000375167 SMIM6P0DI80 62 aa10.33□□□□□ -0.76
H2AFX-201ENST00000375167 GAGE2BQ13066 116 aa10.33□□□□□ -0.76
H2AFX-201ENST00000375167 UNQ6190/PRO20217Q6UXQ8 127 aa10.33□□□□□ -0.76
H2AFX-201ENST00000375167 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
H2AFX-201ENST00000375167 C10orf25Q5T742 122 aa10.32□□□□□ -0.76
H2AFX-201ENST00000375167 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
H2AFX-201ENST00000375167 C3orf79P0CE67 100 aa10.31□□□□□ -0.76
H2AFX-201ENST00000375167 CRYGAP11844 174 aa10.31□□□□□ -0.76
H2AFX-201ENST00000375167 LINC01545Q5VT33 79 aa10.31□□□□□ -0.76
H2AFX-201ENST00000375167 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
H2AFX-201ENST00000375167 TRBV30A0A0K0K1B3 111 aa10.3□□□□□ -0.76
H2AFX-201ENST00000375167 C2orf82Q6UX34 121 aa10.3□□□□□ -0.76
H2AFX-201ENST00000375167 PHF5AQ7RTV0 110 aaKnown RBP10.3□□□□□ -0.76
H2AFX-201ENST00000375167 C6orf48Q9UBA6 75 aa10.3□□□□□ -0.76
H2AFX-201ENST00000375167 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
H2AFX-201ENST00000375167 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
H2AFX-201ENST00000375167 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
H2AFX-201ENST00000375167 TLX1NBP0CAT3 122 aa10.28□□□□□ -0.76
H2AFX-201ENST00000375167 RPL18AQ02543 176 aaKnown RBP10.28□□□□□ -0.76
H2AFX-201ENST00000375167 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.76
H2AFX-201ENST00000375167 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
H2AFX-201ENST00000375167 PYY3Q5JQD4 70 aa10.26□□□□□ -0.77
H2AFX-201ENST00000375167 C12orf57Q99622 126 aa10.26□□□□□ -0.77
H2AFX-201ENST00000375167 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
H2AFX-201ENST00000375167 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
H2AFX-201ENST00000375167 HSBP1L1C9JCN9 74 aa10.25□□□□□ -0.77
H2AFX-201ENST00000375167 JOSD1Q15040 202 aaPredicted RBP10.25□□□□□ -0.77
H2AFX-201ENST00000375167 NMUP48645 174 aa10.24□□□□□ -0.77
H2AFX-201ENST00000375167 HERV-K104P63124 156 aa10.24□□□□□ -0.77
H2AFX-201ENST00000375167 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
H2AFX-201ENST00000375167 LEPROTO15243 131 aa10.23□□□□□ -0.77
H2AFX-201ENST00000375167 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
H2AFX-201ENST00000375167 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
H2AFX-201ENST00000375167 E9PLD3 99 aa10.22□□□□□ -0.77
H2AFX-201ENST00000375167 COX17Q14061 63 aa10.22□□□□□ -0.77
H2AFX-201ENST00000375167 GAGE2EQ4V326 116 aa10.22□□□□□ -0.77
H2AFX-201ENST00000375167 GAGE2DQ9UEU5 116 aa10.22□□□□□ -0.77
H2AFX-201ENST00000375167 SCGB1D1O95968 90 aa10.21□□□□□ -0.78
H2AFX-201ENST00000375167 IGLV7-46A0A075B6I9 117 aa10.2□□□□□ -0.78
H2AFX-201ENST00000375167 J3QQQ9 107 aa10.2□□□□□ -0.78
H2AFX-201ENST00000375167 NDUFA12Q9UI09 145 aa10.19□□□□□ -0.78
H2AFX-201ENST00000375167 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
H2AFX-201ENST00000375167 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
H2AFX-201ENST00000375167 MEIG1Q5JSS6 88 aa10.16□□□□□ -0.78
H2AFX-201ENST00000375167 ZNF625Q96I27 306 aaPredicted RBP10.16□□□□□ -0.78
H2AFX-201ENST00000375167 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
H2AFX-201ENST00000375167 FAM168BA1KXE4 195 aa10.15□□□□□ -0.78
H2AFX-201ENST00000375167 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
H2AFX-201ENST00000375167 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
H2AFX-201ENST00000375167 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
H2AFX-201ENST00000375167 LINC00158P58513 81 aa10.13□□□□□ -0.79
H2AFX-201ENST00000375167 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
H2AFX-201ENST00000375167 FAM19A5Q7Z5A7 132 aaPredicted RBP10.13□□□□□ -0.79
H2AFX-201ENST00000375167 XAGE1AQ9HD64 81 aa10.13□□□□□ -0.79
H2AFX-201ENST00000375167 PFN2P35080 140 aa10.12□□□□□ -0.79
H2AFX-201ENST00000375167 KRTAP7-1Q8IUC3 87 aa10.12□□□□□ -0.79
H2AFX-201ENST00000375167 A0A087X002 238 aa10.11□□□□□ -0.79
H2AFX-201ENST00000375167 S100A12P80511 92 aa10.11□□□□□ -0.79
H2AFX-201ENST00000375167 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
H2AFX-201ENST00000375167 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
H2AFX-201ENST00000375167 UBE2BP63146 152 aa10.1□□□□□ -0.79
H2AFX-201ENST00000375167 MIEN1Q9BRT3 115 aa10.1□□□□□ -0.79
H2AFX-201ENST00000375167 M0QXV9 152 aa10.09□□□□□ -0.79
H2AFX-201ENST00000375167 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
H2AFX-201ENST00000375167 SCGB1D4Q6XE38 83 aa10.09□□□□□ -0.79
H2AFX-201ENST00000375167 COPS9Q8WXC6 57 aa10.09□□□□□ -0.79
H2AFX-201ENST00000375167 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
H2AFX-201ENST00000375167 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
H2AFX-201ENST00000375167 RPL24P83731 157 aaKnown RBP10.07□□□□□ -0.8
H2AFX-201ENST00000375167 ZNF861PO60384 105 aa10.06□□□□□ -0.8
H2AFX-201ENST00000375167 TIMM17BO60830 172 aa10.06□□□□□ -0.8
H2AFX-201ENST00000375167 TMEM238C9JI98 176 aa10.05□□□□□ -0.8
H2AFX-201ENST00000375167 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
H2AFX-201ENST00000375167 ANKRD39Q53RE8 183 aa10.05□□□□□ -0.8
H2AFX-201ENST00000375167 C22orf24Q9Y442 160 aa10.05□□□□□ -0.8
H2AFX-201ENST00000375167 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
H2AFX-201ENST00000375167 A0A0J9YXY3 114 aa10.04□□□□□ -0.8
H2AFX-201ENST00000375167 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
H2AFX-201ENST00000375167 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
H2AFX-201ENST00000375167 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
H2AFX-201ENST00000375167 LINC00304Q8N9R0 145 aa10.04□□□□□ -0.8
H2AFX-201ENST00000375167 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
H2AFX-201ENST00000375167 TP73-AS1Q9UF72 201 aa10.04□□□□□ -0.8
H2AFX-201ENST00000375167 SEC61BP60468 96 aaKnown RBP10.03□□□□□ -0.8
H2AFX-201ENST00000375167 Q6ZVH6 145 aa10.03□□□□□ -0.8
H2AFX-201ENST00000375167 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
H2AFX-201ENST00000375167 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
H2AFX-201ENST00000375167 A0A0U1RRA0 63 aa10.02□□□□□ -0.8
H2AFX-201ENST00000375167 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.8
H2AFX-201ENST00000375167 MT1HP80294 61 aa10.02□□□□□ -0.8
H2AFX-201ENST00000375167 PAM16Q9Y3D7 125 aa10.02□□□□□ -0.8
H2AFX-201ENST00000375167 SPATA45Q537H7 98 aa10.01□□□□□ -0.81
H2AFX-201ENST00000375167 MRPL55Q7Z7F7 128 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms