RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
HLA-DQB1-201ENST00000374943 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB1-201ENST00000374943 TRACP01848 142 aa11.93□□□□□ -0.5
HLA-DQB1-201ENST00000374943 RNF151Q2KHN1 245 aa11.93□□□□□ -0.5
HLA-DQB1-201ENST00000374943 Q9HAA7 133 aa11.93□□□□□ -0.5
HLA-DQB1-201ENST00000374943 OR13C6PQ8NH95 151 aa11.92□□□□□ -0.5
HLA-DQB1-201ENST00000374943 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
HLA-DQB1-201ENST00000374943 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
HLA-DQB1-201ENST00000374943 RMI2Q96E14 147 aa11.91□□□□□ -0.5
HLA-DQB1-201ENST00000374943 H0YGX0 51 aa11.91□□□□□ -0.5
HLA-DQB1-201ENST00000374943 Q8NDZ9 215 aa11.91□□□□□ -0.5
HLA-DQB1-201ENST00000374943 Q6ZRU5 148 aa11.9□□□□□ -0.5
HLA-DQB1-201ENST00000374943 TMEM126AQ9H061 195 aa11.9□□□□□ -0.5
HLA-DQB1-201ENST00000374943 FAM218AQ96MZ4 157 aa11.89□□□□□ -0.51
HLA-DQB1-201ENST00000374943 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
HLA-DQB1-201ENST00000374943 PRR3P79522 188 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-201ENST00000374943 VPS25Q9BRG1 176 aa11.88□□□□□ -0.51
HLA-DQB1-201ENST00000374943 NDUFC2-KCTD14E9PQ53 114 aa11.86□□□□□ -0.51
HLA-DQB1-201ENST00000374943 NCR3O14931 201 aa11.85□□□□□ -0.51
HLA-DQB1-201ENST00000374943 SYCNQ0VAF6 134 aa11.85□□□□□ -0.51
HLA-DQB1-201ENST00000374943 CBY1Q9Y3M2 126 aa11.83□□□□□ -0.52
HLA-DQB1-201ENST00000374943 NUPR2A6NF83 97 aa11.82□□□□□ -0.52
HLA-DQB1-201ENST00000374943 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
HLA-DQB1-201ENST00000374943 IGLV6-57P01721 117 aa11.82□□□□□ -0.52
HLA-DQB1-201ENST00000374943 S100A7L2Q5SY68 101 aa11.82□□□□□ -0.52
HLA-DQB1-201ENST00000374943 XAGE1AQ9HD64 81 aa11.82□□□□□ -0.52
HLA-DQB1-201ENST00000374943 A0A087WYN8 130 aa11.81□□□□□ -0.52
HLA-DQB1-201ENST00000374943 CASC10Q5T4H9 136 aa11.81□□□□□ -0.52
HLA-DQB1-201ENST00000374943 UBE2DNLQ8IWF7 75 aa11.81□□□□□ -0.52
HLA-DQB1-201ENST00000374943 DNAH7Q8WXX0 4024 aa11.8□□□□□ -0.52
HLA-DQB1-201ENST00000374943 A0A1B0GX51 115 aa11.8□□□□□ -0.52
HLA-DQB1-201ENST00000374943 TLX1NBP0CAT3 122 aa11.8□□□□□ -0.52
HLA-DQB1-201ENST00000374943 VPREB1P12018 145 aa11.79□□□□□ -0.52
HLA-DQB1-201ENST00000374943 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB1-201ENST00000374943 CSMD3Q7Z407 3707 aa11.78□□□□□ -0.52
HLA-DQB1-201ENST00000374943 TEX49A0A1B0GTD5 131 aa11.78□□□□□ -0.52
HLA-DQB1-201ENST00000374943 DNAL4O96015 105 aa11.78□□□□□ -0.52
HLA-DQB1-201ENST00000374943 Q6ZRP5 223 aa11.78□□□□□ -0.52
HLA-DQB1-201ENST00000374943 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
HLA-DQB1-201ENST00000374943 BAALC-AS2P0C853 105 aa11.78□□□□□ -0.52
HLA-DQB1-201ENST00000374943 PLECQ15149 4684 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-201ENST00000374943 LECT2O14960 151 aa11.77□□□□□ -0.53
HLA-DQB1-201ENST00000374943 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
HLA-DQB1-201ENST00000374943 SLPIP03973 132 aa11.75□□□□□ -0.53
HLA-DQB1-201ENST00000374943 C6orf99Q4VX62 202 aa11.75□□□□□ -0.53
HLA-DQB1-201ENST00000374943 LYSTQ99698 3801 aa11.75□□□□□ -0.53
HLA-DQB1-201ENST00000374943 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
HLA-DQB1-201ENST00000374943 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
HLA-DQB1-201ENST00000374943 C22orf24Q9Y442 160 aa11.75□□□□□ -0.53
HLA-DQB1-201ENST00000374943 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
HLA-DQB1-201ENST00000374943 M0R378 163 aa11.74□□□□□ -0.53
HLA-DQB1-201ENST00000374943 C9orf129Q5T035 196 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-201ENST00000374943 TRAV23DV6A0A075B6W5 121 aa11.71□□□□□ -0.53
HLA-DQB1-201ENST00000374943 Q8N814 137 aa11.71□□□□□ -0.53
HLA-DQB1-201ENST00000374943 PLA2G2DQ9UNK4 145 aa11.71□□□□□ -0.53
HLA-DQB1-201ENST00000374943 CDIP1Q9H305 208 aa11.7□□□□□ -0.54
HLA-DQB1-201ENST00000374943 TTC32Q5I0X7 151 aa11.69□□□□□ -0.54
HLA-DQB1-201ENST00000374943 LINC00575Q6W349 94 aa11.69□□□□□ -0.54
HLA-DQB1-201ENST00000374943 ORMDL1Q9P0S3 153 aa11.69□□□□□ -0.54
HLA-DQB1-201ENST00000374943 TRBV7-6A0A0J9YX20 115 aa11.68□□□□□ -0.54
HLA-DQB1-201ENST00000374943 SNCGO76070 127 aa11.68□□□□□ -0.54
HLA-DQB1-201ENST00000374943 DIRC1Q969H9 104 aa11.68□□□□□ -0.54
HLA-DQB1-201ENST00000374943 STARD9Q9P2P6 4700 aa11.68□□□□□ -0.54
HLA-DQB1-201ENST00000374943 VPS13DQ5THJ4 4388 aa11.68□□□□□ -0.54
HLA-DQB1-201ENST00000374943 DNAH10Q8IVF4 4471 aa11.67□□□□□ -0.54
HLA-DQB1-201ENST00000374943 ZNF73O43830 326 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-201ENST00000374943 IGLV5-37A0A075B6J1 123 aa11.66□□□□□ -0.54
HLA-DQB1-201ENST00000374943 NBDYA0A0U1RRE5 68 aa11.66□□□□□ -0.54
HLA-DQB1-201ENST00000374943 FAM240AA0A1B0GVK7 77 aa11.66□□□□□ -0.54
HLA-DQB1-201ENST00000374943 LOC107984640A0A0U1RRK4 108 aa11.65□□□□□ -0.54
HLA-DQB1-201ENST00000374943 PSCAO43653 123 aa11.65□□□□□ -0.54
HLA-DQB1-201ENST00000374943 CNBPP62633 177 aaKnown RBP11.65□□□□□ -0.54
HLA-DQB1-201ENST00000374943 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.55
HLA-DQB1-201ENST00000374943 C14orf177Q52M58 125 aa11.65□□□□□ -0.55
HLA-DQB1-201ENST00000374943 OBSCN-AS1Q96MR7 158 aa11.65□□□□□ -0.55
HLA-DQB1-201ENST00000374943 SIGMAR1Q99720 223 aa11.65□□□□□ -0.55
HLA-DQB1-201ENST00000374943 TENM2Q9NT68 2774 aa11.65□□□□□ -0.55
HLA-DQB1-201ENST00000374943 hADV29S1A0JD25 119 aa11.64□□□□□ -0.55
HLA-DQB1-201ENST00000374943 SERTAD4-AS1Q5TG53 156 aa11.64□□□□□ -0.55
HLA-DQB1-201ENST00000374943 NKAPP1Q8N9T2 125 aa11.64□□□□□ -0.55
HLA-DQB1-201ENST00000374943 ELOF1P60002 83 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-201ENST00000374943 COX7BP24311 80 aa11.62□□□□□ -0.55
HLA-DQB1-201ENST00000374943 TMEM256-PLSCR3K7ERE1 68 aa11.62□□□□□ -0.55
HLA-DQB1-201ENST00000374943 KMT2CQ8NEZ4 4911 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB1-201ENST00000374943 C7orf33Q8WU49 177 aa11.61□□□□□ -0.55
HLA-DQB1-201ENST00000374943 KCNQ1DNQ9H478 68 aa11.6□□□□□ -0.55
HLA-DQB1-201ENST00000374943 GAGE2BQ13066 116 aa11.59□□□□□ -0.55
HLA-DQB1-201ENST00000374943 H3BQ85 93 aa11.59□□□□□ -0.55
HLA-DQB1-201ENST00000374943 ACYP1P07311 99 aa11.59□□□□□ -0.55
HLA-DQB1-201ENST00000374943 Q6ZRN7 208 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-201ENST00000374943 XGP55808 180 aa11.57□□□□□ -0.56
HLA-DQB1-201ENST00000374943 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
HLA-DQB1-201ENST00000374943 FAM168BA1KXE4 195 aa11.56□□□□□ -0.56
HLA-DQB1-201ENST00000374943 LRCOL1A6NCL2 159 aa11.56□□□□□ -0.56
HLA-DQB1-201ENST00000374943 KRTAP7-1Q8IUC3 87 aa11.56□□□□□ -0.56
HLA-DQB1-201ENST00000374943 C16orf90A8MZG2 172 aa11.55□□□□□ -0.56
HLA-DQB1-201ENST00000374943 JMJD7-PLA2G4BH0Y9G9 81 aa11.55□□□□□ -0.56
HLA-DQB1-201ENST00000374943 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB1-201ENST00000374943 RYR3Q15413 4870 aa11.54□□□□□ -0.56
HLA-DQB1-201ENST00000374943 PRYO14603 147 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms