RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
RXRB-201ENST00000374680 KPRPQ5T749 579 aaPredicted RBP11.53□□□□□ -0.56
RXRB-201ENST00000374680 SVIPQ8NHG7 77 aa11.53□□□□□ -0.56
RXRB-201ENST00000374680 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.57
RXRB-201ENST00000374680 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
RXRB-201ENST00000374680 TMEM126AQ9H061 195 aa11.51□□□□□ -0.57
RXRB-201ENST00000374680 CXCL5P42830 114 aa11.51□□□□□ -0.57
RXRB-201ENST00000374680 LINC00846Q9NV44 126 aa11.5□□□□□ -0.57
RXRB-201ENST00000374680 MGAM2Q2M2H8 2515 aa11.5□□□□□ -0.57
RXRB-201ENST00000374680 ACYP1P07311 99 aa11.5□□□□□ -0.57
RXRB-201ENST00000374680 Q8N814 137 aa11.49□□□□□ -0.57
RXRB-201ENST00000374680 LINC00643Q86TS7 51 aa11.49□□□□□ -0.57
RXRB-201ENST00000374680 BAHCC1Q9P281 2608 aa11.48□□□□□ -0.57
RXRB-201ENST00000374680 PPDPFQ9H3Y8 114 aa11.48□□□□□ -0.57
RXRB-201ENST00000374680 C6orf48Q9UBA6 75 aa11.46□□□□□ -0.57
RXRB-201ENST00000374680 A0A087WVE0 104 aa11.46□□□□□ -0.57
RXRB-201ENST00000374680 A0A0J9YWU9 116 aa11.46□□□□□ -0.57
RXRB-201ENST00000374680 TRBV7-7A0A0K0K1E9 115 aa11.46□□□□□ -0.57
RXRB-201ENST00000374680 COX17Q14061 63 aa11.46□□□□□ -0.58
RXRB-201ENST00000374680 KLK5Q9Y337 293 aaPredicted RBP11.46□□□□□ -0.58
RXRB-201ENST00000374680 ZNF561-AS1K7EIQ3 104 aa11.45□□□□□ -0.58
RXRB-201ENST00000374680 ESRGQ1W209 222 aa11.44□□□□□ -0.58
RXRB-201ENST00000374680 LINC01561Q8N1V8 128 aa11.44□□□□□ -0.58
RXRB-201ENST00000374680 CAMK2N2Q96S95 79 aa11.44□□□□□ -0.58
RXRB-201ENST00000374680 KRTAP24-1Q3LI83 254 aa11.44□□□□□ -0.58
RXRB-201ENST00000374680 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
RXRB-201ENST00000374680 TRBV10-3A0A0K0K1G6 114 aa11.43□□□□□ -0.58
RXRB-201ENST00000374680 MRAPQ8TCY5 172 aa11.43□□□□□ -0.58
RXRB-201ENST00000374680 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
RXRB-201ENST00000374680 NDUFC2O95298 119 aa11.42□□□□□ -0.58
RXRB-201ENST00000374680 LAMTOR3Q9UHA4 124 aa11.42□□□□□ -0.58
RXRB-201ENST00000374680 IMUPQ9GZP8 106 aa11.41□□□□□ -0.58
RXRB-201ENST00000374680 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.58
RXRB-201ENST00000374680 Q6ZQY7 126 aa11.39□□□□□ -0.59
RXRB-201ENST00000374680 Q6ZRU5 148 aa11.39□□□□□ -0.59
RXRB-201ENST00000374680 DEFB131BA0A096LNP1 70 aa11.39□□□□□ -0.59
RXRB-201ENST00000374680 hADV29S1A0JD25 119 aa11.39□□□□□ -0.59
RXRB-201ENST00000374680 LINC00575Q6W349 94 aa11.38□□□□□ -0.59
RXRB-201ENST00000374680 TMEM256-PLSCR3K7ERE1 68 aa11.37□□□□□ -0.59
RXRB-201ENST00000374680 M0R2N4 97 aa11.37□□□□□ -0.59
RXRB-201ENST00000374680 OBSCN-AS1Q96MR7 158 aa11.36□□□□□ -0.59
RXRB-201ENST00000374680 C11orf45Q8TAV5 145 aa11.36□□□□□ -0.59
RXRB-201ENST00000374680 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
RXRB-201ENST00000374680 CCKP06307 115 aa11.35□□□□□ -0.59
RXRB-201ENST00000374680 TRAV23DV6A0A075B6W5 121 aa11.33□□□□□ -0.6
RXRB-201ENST00000374680 IGLV6-57P01721 117 aa11.32□□□□□ -0.6
RXRB-201ENST00000374680 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
RXRB-201ENST00000374680 WIPF1O43516 503 aa11.32□□□□□ -0.6
RXRB-201ENST00000374680 TENM2Q9NT68 2774 aa11.31□□□□□ -0.6
RXRB-201ENST00000374680 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
RXRB-201ENST00000374680 STAB2Q8WWQ8 2551 aa11.31□□□□□ -0.6
RXRB-201ENST00000374680 JMJD7-PLA2G4BH0Y9G9 81 aa11.31□□□□□ -0.6
RXRB-201ENST00000374680 RBM3P98179 157 aaKnown RBP11.31□□□□□ -0.6
RXRB-201ENST00000374680 FAM19A1Q7Z5A9 133 aa11.3□□□□□ -0.6
RXRB-201ENST00000374680 DIRC1Q969H9 104 aa11.3□□□□□ -0.6
RXRB-201ENST00000374680 LINC00167Q96N53 147 aa11.3□□□□□ -0.6
RXRB-201ENST00000374680 ZNF73O43830 326 aaPredicted RBP11.3□□□□□ -0.6
RXRB-201ENST00000374680 C9orf153Q5TBE3 101 aa11.29□□□□□ -0.6
RXRB-201ENST00000374680 KRTAP26-1Q6PEX3 210 aa11.29□□□□□ -0.6
RXRB-201ENST00000374680 Q6ZRP5 223 aa11.29□□□□□ -0.6
RXRB-201ENST00000374680 A0A1B0GX51 115 aa11.29□□□□□ -0.6
RXRB-201ENST00000374680 CSMD3Q7Z407 3707 aa11.28□□□□□ -0.6
RXRB-201ENST00000374680 CASC10Q5T4H9 136 aa11.28□□□□□ -0.6
RXRB-201ENST00000374680 CMYA5Q8N3K9 4069 aa11.28□□□□□ -0.6
RXRB-201ENST00000374680 VPREB1P12018 145 aa11.26□□□□□ -0.61
RXRB-201ENST00000374680 HAMPP81172 84 aa11.26□□□□□ -0.61
RXRB-201ENST00000374680 DEFB105AQ8NG35 78 aa11.26□□□□□ -0.61
RXRB-201ENST00000374680 COX7BP24311 80 aa11.26□□□□□ -0.61
RXRB-201ENST00000374680 Q6JHZ5 121 aa11.25□□□□□ -0.61
RXRB-201ENST00000374680 C3orf22Q8N5N4 141 aa11.25□□□□□ -0.61
RXRB-201ENST00000374680 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
RXRB-201ENST00000374680 GVQW2A0A096LPI5 108 aaPredicted RBP11.24□□□□□ -0.61
RXRB-201ENST00000374680 RPL37AP8A6NKH3 93 aa11.24□□□□□ -0.61
RXRB-201ENST00000374680 NDUFC2-KCTD14E9PQ53 114 aa11.24□□□□□ -0.61
RXRB-201ENST00000374680 UQCRQO14949 82 aa11.24□□□□□ -0.61
RXRB-201ENST00000374680 DSCR8Q96T75 97 aa11.24□□□□□ -0.61
RXRB-201ENST00000374680 EGFEM1PQ0D2K5 195 aa11.23□□□□□ -0.61
RXRB-201ENST00000374680 SYCNQ0VAF6 134 aa11.23□□□□□ -0.61
RXRB-201ENST00000374680 UBL5Q9BZL1 73 aa11.22□□□□□ -0.61
RXRB-201ENST00000374680 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
RXRB-201ENST00000374680 Q6ZQT0 140 aa11.22□□□□□ -0.61
RXRB-201ENST00000374680 FAM168BA1KXE4 195 aa11.21□□□□□ -0.61
RXRB-201ENST00000374680 SERTAD4-AS1Q5TG53 156 aa11.21□□□□□ -0.61
RXRB-201ENST00000374680 CYSTM1Q9H1C7 97 aa11.21□□□□□ -0.62
RXRB-201ENST00000374680 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
RXRB-201ENST00000374680 H3BNG1 76 aa11.19□□□□□ -0.62
RXRB-201ENST00000374680 M0R378 163 aa11.19□□□□□ -0.62
RXRB-201ENST00000374680 LINC00588Q9Y4M8 146 aa11.19□□□□□ -0.62
RXRB-201ENST00000374680 ATOX1O00244 68 aa11.18□□□□□ -0.62
RXRB-201ENST00000374680 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
RXRB-201ENST00000374680 LYSTQ99698 3801 aa11.17□□□□□ -0.62
RXRB-201ENST00000374680 COX7CP15954 63 aa11.17□□□□□ -0.62
RXRB-201ENST00000374680 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
RXRB-201ENST00000374680 ELOF1P60002 83 aaKnown RBP11.17□□□□□ -0.62
RXRB-201ENST00000374680 UPK3BQ9BT76 320 aa11.16□□□□□ -0.62
RXRB-201ENST00000374680 COL7A1Q02388 2944 aa11.16□□□□□ -0.62
RXRB-201ENST00000374680 MUC7Q8TAX7 377 aa11.15□□□□□ -0.62
RXRB-201ENST00000374680 GHRHP01286 108 aa11.14□□□□□ -0.63
RXRB-201ENST00000374680 Q6ZVQ6 151 aa11.14□□□□□ -0.63
RXRB-201ENST00000374680 C7orf33Q8WU49 177 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms