RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 Q8N814 137 aa19.42■□□□□ 0.7
SSBP3-204ENST00000371320 LINC00167Q96N53 147 aa19.41■□□□□ 0.7
SSBP3-204ENST00000371320 C14orf132Q9NPU4 83 aa19.41■□□□□ 0.7
SSBP3-204ENST00000371320 C6orf48Q9UBA6 75 aa19.4■□□□□ 0.7
SSBP3-204ENST00000371320 ESRGQ1W209 222 aa19.4■□□□□ 0.7
SSBP3-204ENST00000371320 C6orf99Q4VX62 202 aa19.4■□□□□ 0.7
SSBP3-204ENST00000371320 TRBV7-7A0A0K0K1E9 115 aa19.39■□□□□ 0.69
SSBP3-204ENST00000371320 LINC00643Q86TS7 51 aa19.39■□□□□ 0.69
SSBP3-204ENST00000371320 FBN1P35555 2871 aaKnown RBP19.38■□□□□ 0.69
SSBP3-204ENST00000371320 SDIM1Q6ZPB5 146 aa19.38■□□□□ 0.69
SSBP3-204ENST00000371320 STAB1Q9NY15 2570 aa19.37■□□□□ 0.69
SSBP3-204ENST00000371320 PKD1L1Q8TDX9 2849 aa19.37■□□□□ 0.69
SSBP3-204ENST00000371320 DEFB131BA0A096LNP1 70 aa19.36■□□□□ 0.69
SSBP3-204ENST00000371320 ZNF561-AS1K7EIQ3 104 aa19.36■□□□□ 0.69
SSBP3-204ENST00000371320 C11orf45Q8TAV5 145 aa19.36■□□□□ 0.69
SSBP3-204ENST00000371320 KRTAP26-1Q6PEX3 210 aa19.36■□□□□ 0.69
SSBP3-204ENST00000371320 HIGD2BQ4VC39 106 aa19.35■□□□□ 0.69
SSBP3-204ENST00000371320 CMYA5Q8N3K9 4069 aa19.35■□□□□ 0.69
SSBP3-204ENST00000371320 RPL18AQ02543 176 aaKnown RBP19.34■□□□□ 0.69
SSBP3-204ENST00000371320 ANK2Q01484 3957 aa19.34■□□□□ 0.69
SSBP3-204ENST00000371320 NHLRC4P0CG21 123 aaPredicted RBP19.34■□□□□ 0.69
SSBP3-204ENST00000371320 CAMK2N2Q96S95 79 aa19.32■□□□□ 0.68
SSBP3-204ENST00000371320 IGLV6-57P01721 117 aa19.32■□□□□ 0.68
SSBP3-204ENST00000371320 XAGE1AQ9HD64 81 aa19.31■□□□□ 0.68
SSBP3-204ENST00000371320 IMUPQ9GZP8 106 aa19.31■□□□□ 0.68
SSBP3-204ENST00000371320 TMEM256-PLSCR3K7ERE1 68 aa19.3■□□□□ 0.68
SSBP3-204ENST00000371320 LINC00575Q6W349 94 aa19.29■□□□□ 0.68
SSBP3-204ENST00000371320 TENM3Q9P273 2699 aa19.29■□□□□ 0.68
SSBP3-204ENST00000371320 LINC01556Q5JQF7 62 aa19.28■□□□□ 0.68
SSBP3-204ENST00000371320 C1orf43Q9BWL3 253 aa19.27■□□□□ 0.68
SSBP3-204ENST00000371320 C15orf56Q8N910 161 aa19.26■□□□□ 0.67
SSBP3-204ENST00000371320 JMJD7-PLA2G4BH0Y9G9 81 aa19.24■□□□□ 0.67
SSBP3-204ENST00000371320 Q6ZRU5 148 aa19.23■□□□□ 0.67
SSBP3-204ENST00000371320 TRBV10-3A0A0K0K1G6 114 aa19.23■□□□□ 0.67
SSBP3-204ENST00000371320 hADV29S1A0JD25 119 aa19.23■□□□□ 0.67
SSBP3-204ENST00000371320 MAST4O15021 2626 aa19.23■□□□□ 0.67
SSBP3-204ENST00000371320 C2orf48Q96LS8 159 aa19.22■□□□□ 0.67
SSBP3-204ENST00000371320 DNAH3Q8TD57 4116 aa19.21■□□□□ 0.67
SSBP3-204ENST00000371320 IGKV2D-24A0A075B6R9 120 aa19.21■□□□□ 0.67
SSBP3-204ENST00000371320 LINC00846Q9NV44 126 aa19.2■□□□□ 0.66
SSBP3-204ENST00000371320 TRAV23DV6A0A075B6W5 121 aa19.19■□□□□ 0.66
SSBP3-204ENST00000371320 CCKP06307 115 aa19.18■□□□□ 0.66
SSBP3-204ENST00000371320 FAM236AA0A1B0GUQ0 79 aa19.16■□□□□ 0.66
SSBP3-204ENST00000371320 FAM236BA0A1B0GV22 79 aa19.16■□□□□ 0.66
SSBP3-204ENST00000371320 NDUFC2-KCTD14E9PQ53 114 aa19.16■□□□□ 0.66
SSBP3-204ENST00000371320 DIRC1Q969H9 104 aa19.16■□□□□ 0.66
SSBP3-204ENST00000371320 VPREB1P12018 145 aa19.15■□□□□ 0.66
SSBP3-204ENST00000371320 PRB2P02812 416 aaPredicted RBP19.14■□□□□ 0.65
SSBP3-204ENST00000371320 DNAH10OSP0CZ25 163 aa19.14■□□□□ 0.65
SSBP3-204ENST00000371320 TRAV10A0A0B4J240 114 aa19.13■□□□□ 0.65
SSBP3-204ENST00000371320 ZNF73O43830 326 aaPredicted RBP19.12■□□□□ 0.65
SSBP3-204ENST00000371320 NOTCH1P46531 2555 aa19.12■□□□□ 0.65
SSBP3-204ENST00000371320 F8WDY8 70 aa19.11■□□□□ 0.65
SSBP3-204ENST00000371320 CCDC179H3BU77 68 aa19.1■□□□□ 0.65
SSBP3-204ENST00000371320 M0R378 163 aa19.1■□□□□ 0.65
SSBP3-204ENST00000371320 SYCNQ0VAF6 134 aa19.08■□□□□ 0.64
SSBP3-204ENST00000371320 Q6ZQY7 126 aa19.08■□□□□ 0.64
SSBP3-204ENST00000371320 Q6JHZ5 121 aa19.07■□□□□ 0.64
SSBP3-204ENST00000371320 COX7BP24311 80 aa19.07■□□□□ 0.64
SSBP3-204ENST00000371320 Q6ZRP5 223 aa19.07■□□□□ 0.64
SSBP3-204ENST00000371320 TM2D3Q9BRN9 247 aa19.07■□□□□ 0.64
SSBP3-204ENST00000371320 LAMTOR3Q9UHA4 124 aa19.05■□□□□ 0.64
SSBP3-204ENST00000371320 MRAPQ8TCY5 172 aa19.05■□□□□ 0.64
SSBP3-204ENST00000371320 LINC00588Q9Y4M8 146 aa19.05■□□□□ 0.64
SSBP3-204ENST00000371320 IGKV3D-7A0A0C4DH55 119 aa19.04■□□□□ 0.64
SSBP3-204ENST00000371320 RBM3P98179 157 aaKnown RBP19.04■□□□□ 0.64
SSBP3-204ENST00000371320 TRBV7-6A0A0J9YX20 115 aa19.04■□□□□ 0.64
SSBP3-204ENST00000371320 H3BQ85 93 aa19.03■□□□□ 0.64
SSBP3-204ENST00000371320 ELOF1P60002 83 aaKnown RBP19.03■□□□□ 0.64
SSBP3-204ENST00000371320 COL6A5A8TX70 2615 aa19.03■□□□□ 0.64
SSBP3-204ENST00000371320 B5MCH6 92 aa19.02■□□□□ 0.64
SSBP3-204ENST00000371320 K7EIL1 84 aa19.01■□□□□ 0.63
SSBP3-204ENST00000371320 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP18.99■□□□□ 0.63
SSBP3-204ENST00000371320 Q6ZQT0 140 aa18.97■□□□□ 0.63
SSBP3-204ENST00000371320 LOC110117498A0A087WWA1 95 aa18.96■□□□□ 0.63
SSBP3-204ENST00000371320 NBEAL1Q6ZS30 2694 aa18.95■□□□□ 0.62
SSBP3-204ENST00000371320 GHRHP01286 108 aa18.93■□□□□ 0.62
SSBP3-204ENST00000371320 DSCR8Q96T75 97 aa18.93■□□□□ 0.62
SSBP3-204ENST00000371320 HIST1H4AP62805 103 aaKnown RBP18.91■□□□□ 0.62
SSBP3-204ENST00000371320 NKAPP1Q8N9T2 125 aa18.91■□□□□ 0.62
SSBP3-204ENST00000371320 USP17L23D6RBM5 183 aa18.9■□□□□ 0.62
SSBP3-204ENST00000371320 LINC00528Q8N1L1 170 aa18.9■□□□□ 0.62
SSBP3-204ENST00000371320 UBL5Q9BZL1 73 aa18.9■□□□□ 0.62
SSBP3-204ENST00000371320 CASC10Q5T4H9 136 aa18.89■□□□□ 0.61
SSBP3-204ENST00000371320 TLX1NBP0CAT3 122 aa18.88■□□□□ 0.61
SSBP3-204ENST00000371320 RMI2Q96E14 147 aa18.88■□□□□ 0.61
SSBP3-204ENST00000371320 HUWE1Q7Z6Z7 4374 aaKnown RBP18.88■□□□□ 0.61
SSBP3-204ENST00000371320 ATP5EP2Q5VTU8 51 aa18.88■□□□□ 0.61
SSBP3-204ENST00000371320 PDE6GP18545 87 aa18.87■□□□□ 0.61
SSBP3-204ENST00000371320 SERTAD4-AS1Q5TG53 156 aa18.87■□□□□ 0.61
SSBP3-204ENST00000371320 A0A087WVE0 104 aa18.85■□□□□ 0.61
SSBP3-204ENST00000371320 ATOX1O00244 68 aa18.84■□□□□ 0.61
SSBP3-204ENST00000371320 SS18L2Q9UHA2 77 aa18.84■□□□□ 0.61
SSBP3-204ENST00000371320 C7orf33Q8WU49 177 aa18.83■□□□□ 0.61
SSBP3-204ENST00000371320 KCNQ1DNQ9H478 68 aa18.83■□□□□ 0.61
SSBP3-204ENST00000371320 UPK3BQ9BT76 320 aa18.83■□□□□ 0.6
SSBP3-204ENST00000371320 M0R2N4 97 aa18.82■□□□□ 0.6
SSBP3-204ENST00000371320 C3orf22Q8N5N4 141 aa18.8■□□□□ 0.6
SSBP3-204ENST00000371320 PLA2G2DQ9UNK4 145 aa18.8■□□□□ 0.6
SSBP3-204ENST00000371320 TRBV7-4A0A0J9YYF1 115 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms