RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 HERV-K104P63124 156 aa11.85□□□□□ -0.51
NPM3-201ENST00000370110 TMA7Q9Y2S6 64 aaKnown RBP11.85□□□□□ -0.51
NPM3-201ENST00000370110 E9PLD3 99 aa11.84□□□□□ -0.51
NPM3-201ENST00000370110 AKR1D1P51857 326 aa11.84□□□□□ -0.51
NPM3-201ENST00000370110 TSPEAR-AS2P59090 65 aa11.84□□□□□ -0.51
NPM3-201ENST00000370110 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
NPM3-201ENST00000370110 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
NPM3-201ENST00000370110 COX17Q14061 63 aa11.83□□□□□ -0.52
NPM3-201ENST00000370110 LINC00587B1AMM8 73 aa11.81□□□□□ -0.52
NPM3-201ENST00000370110 SMIM13P0DJ93 91 aa11.81□□□□□ -0.52
NPM3-201ENST00000370110 NMUP48645 174 aa11.81□□□□□ -0.52
NPM3-201ENST00000370110 PHF5AQ7RTV0 110 aaKnown RBP11.81□□□□□ -0.52
NPM3-201ENST00000370110 SCGB1D1O95968 90 aa11.8□□□□□ -0.52
NPM3-201ENST00000370110 M0QXV9 152 aa11.79□□□□□ -0.52
NPM3-201ENST00000370110 SND1-IT1Q9HBX3 110 aa11.78□□□□□ -0.52
NPM3-201ENST00000370110 HSBP1L1C9JCN9 74 aa11.77□□□□□ -0.53
NPM3-201ENST00000370110 UBE2BP63146 152 aa11.77□□□□□ -0.53
NPM3-201ENST00000370110 IGKV2D-26A0A0A0MRZ7 120 aa11.75□□□□□ -0.53
NPM3-201ENST00000370110 MT1HL1P0DM35 61 aa11.75□□□□□ -0.53
NPM3-201ENST00000370110 ANKRD39Q53RE8 183 aa11.75□□□□□ -0.53
NPM3-201ENST00000370110 MIR7-3HGQ8N6C7 128 aa11.75□□□□□ -0.53
NPM3-201ENST00000370110 NKAPP1Q8N9T2 125 aa11.75□□□□□ -0.53
NPM3-201ENST00000370110 C22orf24Q9Y442 160 aa11.75□□□□□ -0.53
NPM3-201ENST00000370110 ZNF815PA8K554 130 aa11.74□□□□□ -0.53
NPM3-201ENST00000370110 LBHQ53QV2 105 aaPredicted RBP11.73□□□□□ -0.53
NPM3-201ENST00000370110 KRTAP7-1Q8IUC3 87 aa11.73□□□□□ -0.53
NPM3-201ENST00000370110 A0A0J9YXY3 114 aa11.72□□□□□ -0.53
NPM3-201ENST00000370110 RPL24P83731 157 aaKnown RBP11.72□□□□□ -0.53
NPM3-201ENST00000370110 DAND5Q8N907 189 aa11.72□□□□□ -0.53
NPM3-201ENST00000370110 TTTY13Q9BZ97 58 aa11.72□□□□□ -0.53
NPM3-201ENST00000370110 GAGE10A6NGK3 116 aa11.71□□□□□ -0.53
NPM3-201ENST00000370110 SCGB1D4Q6XE38 83 aa11.7□□□□□ -0.54
NPM3-201ENST00000370110 MRPL55Q7Z7F7 128 aaKnown RBP11.7□□□□□ -0.54
NPM3-201ENST00000370110 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
NPM3-201ENST00000370110 BOD1L2Q8IYS8 172 aa11.69□□□□□ -0.54
NPM3-201ENST00000370110 NPC2P61916 151 aa11.68□□□□□ -0.54
NPM3-201ENST00000370110 PRR3P79522 188 aaKnown RBP11.68□□□□□ -0.54
NPM3-201ENST00000370110 C1orf137Q5JT78 98 aa11.68□□□□□ -0.54
NPM3-201ENST00000370110 TP73-AS1Q9UF72 201 aa11.67□□□□□ -0.54
NPM3-201ENST00000370110 PSORS1C2Q9UIG4 136 aa11.67□□□□□ -0.54
NPM3-201ENST00000370110 RPL37AP8A6NKH3 93 aa11.66□□□□□ -0.54
NPM3-201ENST00000370110 VPREB1P12018 145 aa11.66□□□□□ -0.54
NPM3-201ENST00000370110 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
NPM3-201ENST00000370110 LINC00167Q96N53 147 aa11.66□□□□□ -0.54
NPM3-201ENST00000370110 IGLV5-37A0A075B6J1 123 aa11.65□□□□□ -0.54
NPM3-201ENST00000370110 LRP2P98164 4655 aa11.64□□□□□ -0.55
NPM3-201ENST00000370110 ADAMTSL4-AS1Q5T5F5 129 aa11.64□□□□□ -0.55
NPM3-201ENST00000370110 RNF213Q63HN8 5207 aa11.63□□□□□ -0.55
NPM3-201ENST00000370110 NCR3O14931 201 aa11.63□□□□□ -0.55
NPM3-201ENST00000370110 KRTAP11-1Q8IUC1 163 aa11.63□□□□□ -0.55
NPM3-201ENST00000370110 IGKV2-28A0A075B6P5 120 aa11.62□□□□□ -0.55
NPM3-201ENST00000370110 TIMM17BO60830 172 aa11.62□□□□□ -0.55
NPM3-201ENST00000370110 IGKV2D-28P01615 120 aa11.62□□□□□ -0.55
NPM3-201ENST00000370110 Q8NDZ9 215 aa11.62□□□□□ -0.55
NPM3-201ENST00000370110 TMEM238C9JI98 176 aa11.61□□□□□ -0.55
NPM3-201ENST00000370110 JOSD1Q15040 202 aaPredicted RBP11.61□□□□□ -0.55
NPM3-201ENST00000370110 M0R378 163 aa11.6□□□□□ -0.55
NPM3-201ENST00000370110 TNXBP22105 4242 aa11.59□□□□□ -0.55
NPM3-201ENST00000370110 VAMP8Q9BV40 100 aa11.59□□□□□ -0.55
NPM3-201ENST00000370110 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
NPM3-201ENST00000370110 LITAFQ99732 161 aa11.58□□□□□ -0.56
NPM3-201ENST00000370110 IGLV7-43P04211 117 aa11.57□□□□□ -0.56
NPM3-201ENST00000370110 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
NPM3-201ENST00000370110 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
NPM3-201ENST00000370110 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
NPM3-201ENST00000370110 IGLV1-50A0A075B6I6 118 aa11.55□□□□□ -0.56
NPM3-201ENST00000370110 LOC107984156A0A0G2JMH3 177 aa11.55□□□□□ -0.56
NPM3-201ENST00000370110 ARL17AQ8IVW1 177 aa11.55□□□□□ -0.56
NPM3-201ENST00000370110 S100A12P80511 92 aa11.54□□□□□ -0.56
NPM3-201ENST00000370110 SRSF9Q13242 221 aaKnown RBP eCLIP11.54□□□□□ -0.56
NPM3-201ENST00000370110 S100A7L2Q5SY68 101 aa11.54□□□□□ -0.56
NPM3-201ENST00000370110 SPINK6Q6UWN8 80 aa11.54□□□□□ -0.56
NPM3-201ENST00000370110 COPS9Q8WXC6 57 aa11.54□□□□□ -0.56
NPM3-201ENST00000370110 SPANXDQ9BXN6 97 aa11.54□□□□□ -0.56
NPM3-201ENST00000370110 SPANXB1Q9NS25 103 aaPredicted RBP11.54□□□□□ -0.56
NPM3-201ENST00000370110 SPANXCQ9NY87 97 aa11.54□□□□□ -0.56
NPM3-201ENST00000370110 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
NPM3-201ENST00000370110 BCE1O60756 84 aa11.53□□□□□ -0.56
NPM3-201ENST00000370110 NDUFC2O95298 119 aa11.53□□□□□ -0.56
NPM3-201ENST00000370110 REG3GQ6UW15 175 aa11.53□□□□□ -0.56
NPM3-201ENST00000370110 COX8AP10176 69 aa11.52□□□□□ -0.57
NPM3-201ENST00000370110 UBE2AP49459 152 aa11.52□□□□□ -0.57
NPM3-201ENST00000370110 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
NPM3-201ENST00000370110 C14orf144Q96I85 54 aa11.52□□□□□ -0.57
NPM3-201ENST00000370110 TRBV10-3A0A0K0K1G6 114 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 TRBV10-2A0A0K0K1G8 114 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 IFITM1P13164 125 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 DDTP30046 118 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 Q6ZVH6 145 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 FAM19A1Q7Z5A9 133 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 MUSTN1Q8IVN3 82 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 OR13C6PQ8NH95 151 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 TMEM126AQ9H061 195 aa11.5□□□□□ -0.57
NPM3-201ENST00000370110 RPL28P46779 137 aaKnown RBP11.49□□□□□ -0.57
NPM3-201ENST00000370110 DIRC1Q969H9 104 aa11.48□□□□□ -0.57
NPM3-201ENST00000370110 PRYO14603 147 aa11.47□□□□□ -0.57
NPM3-201ENST00000370110 ZNF861PO60384 105 aa11.47□□□□□ -0.57
NPM3-201ENST00000370110 SLC25A34Q6PIV7 304 aa11.46□□□□□ -0.57
NPM3-201ENST00000370110 DLEU1O43261 78 aa11.45□□□□□ -0.58
NPM3-201ENST00000370110 LINC00518Q8N0U6 118 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms