RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 NPC2P61916 151 aa8.71□□□□□ -1.02
TPM3-211ENST00000368531 PYY3Q5JQD4 70 aa8.71□□□□□ -1.02
TPM3-211ENST00000368531 SCGB1D4Q6XE38 83 aa8.71□□□□□ -1.02
TPM3-211ENST00000368531 Q8N1X5 172 aa8.71□□□□□ -1.02
TPM3-211ENST00000368531 PAM16Q9Y3D7 125 aa8.71□□□□□ -1.02
TPM3-211ENST00000368531 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
TPM3-211ENST00000368531 ADAMTSL4-AS1Q5T5F5 129 aa8.7□□□□□ -1.02
TPM3-211ENST00000368531 Q5VSD8 79 aa8.7□□□□□ -1.02
TPM3-211ENST00000368531 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
TPM3-211ENST00000368531 VAMP8Q9BV40 100 aa8.7□□□□□ -1.02
TPM3-211ENST00000368531 C22orf24Q9Y442 160 aa8.7□□□□□ -1.02
TPM3-211ENST00000368531 BIRC6Q9NR09 4857 aa8.69□□□□□ -1.02
TPM3-211ENST00000368531 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
TPM3-211ENST00000368531 SPATA45Q537H7 98 aa8.68□□□□□ -1.02
TPM3-211ENST00000368531 BOD1L2Q8IYS8 172 aa8.68□□□□□ -1.02
TPM3-211ENST00000368531 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
TPM3-211ENST00000368531 Q8NDZ9 215 aa8.68□□□□□ -1.02
TPM3-211ENST00000368531 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
TPM3-211ENST00000368531 GAGE10A6NGK3 116 aa8.67□□□□□ -1.02
TPM3-211ENST00000368531 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
TPM3-211ENST00000368531 UBE2BP63146 152 aa8.67□□□□□ -1.02
TPM3-211ENST00000368531 RPL24P83731 157 aaKnown RBP8.67□□□□□ -1.02
TPM3-211ENST00000368531 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
TPM3-211ENST00000368531 LITAFQ99732 161 aa8.67□□□□□ -1.02
TPM3-211ENST00000368531 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
TPM3-211ENST00000368531 TP73-AS1Q9UF72 201 aa8.67□□□□□ -1.02
TPM3-211ENST00000368531 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
TPM3-211ENST00000368531 TIMM17BO60830 172 aa8.66□□□□□ -1.02
TPM3-211ENST00000368531 VPREB1P12018 145 aa8.66□□□□□ -1.02
TPM3-211ENST00000368531 PRR3P79522 188 aaKnown RBP8.66□□□□□ -1.02
TPM3-211ENST00000368531 C14orf144Q96I85 54 aa8.66□□□□□ -1.02
TPM3-211ENST00000368531 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
TPM3-211ENST00000368531 RPL37AP8A6NKH3 93 aa8.65□□□□□ -1.02
TPM3-211ENST00000368531 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
TPM3-211ENST00000368531 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
TPM3-211ENST00000368531 LBHQ53QV2 105 aaPredicted RBP8.65□□□□□ -1.02
TPM3-211ENST00000368531 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.02
TPM3-211ENST00000368531 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
TPM3-211ENST00000368531 KRTAP11-1Q8IUC1 163 aa8.65□□□□□ -1.02
TPM3-211ENST00000368531 IGLV5-37A0A075B6J1 123 aa8.64□□□□□ -1.03
TPM3-211ENST00000368531 TMEM238C9JI98 176 aa8.64□□□□□ -1.03
TPM3-211ENST00000368531 NCR3O14931 201 aa8.64□□□□□ -1.03
TPM3-211ENST00000368531 COX8AP10176 69 aa8.64□□□□□ -1.03
TPM3-211ENST00000368531 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
TPM3-211ENST00000368531 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
TPM3-211ENST00000368531 PSORS1C2Q9UIG4 136 aa8.62□□□□□ -1.03
TPM3-211ENST00000368531 KIAA1109Q2LD37 5005 aa8.62□□□□□ -1.03
TPM3-211ENST00000368531 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
TPM3-211ENST00000368531 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
TPM3-211ENST00000368531 SPANXDQ9BXN6 97 aa8.61□□□□□ -1.03
TPM3-211ENST00000368531 SPANXCQ9NY87 97 aa8.61□□□□□ -1.03
TPM3-211ENST00000368531 HSPG2P98160 4391 aa8.61□□□□□ -1.03
TPM3-211ENST00000368531 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
TPM3-211ENST00000368531 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
TPM3-211ENST00000368531 M0R378 163 aa8.6□□□□□ -1.03
TPM3-211ENST00000368531 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
TPM3-211ENST00000368531 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
TPM3-211ENST00000368531 C1orf137Q5JT78 98 aa8.6□□□□□ -1.03
TPM3-211ENST00000368531 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
TPM3-211ENST00000368531 S100A12P80511 92 aa8.59□□□□□ -1.03
TPM3-211ENST00000368531 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
TPM3-211ENST00000368531 MUSTN1Q8IVN3 82 aa8.59□□□□□ -1.03
TPM3-211ENST00000368531 DLEU1O43261 78 aa8.58□□□□□ -1.04
TPM3-211ENST00000368531 NDUFC2O95298 119 aa8.57□□□□□ -1.04
TPM3-211ENST00000368531 SPANXB1Q9NS25 103 aaPredicted RBP8.57□□□□□ -1.04
TPM3-211ENST00000368531 RYR1P21817 5038 aa8.56□□□□□ -1.04
TPM3-211ENST00000368531 IGLV1-50A0A075B6I6 118 aa8.56□□□□□ -1.04
TPM3-211ENST00000368531 IFITM1P13164 125 aa8.56□□□□□ -1.04
TPM3-211ENST00000368531 HNRNPA3P51991 378 aaKnown RBP8.56□□□□□ -1.04
TPM3-211ENST00000368531 Q6ZVH6 145 aa8.56□□□□□ -1.04
TPM3-211ENST00000368531 HIST1H4GQ99525 98 aa8.56□□□□□ -1.04
TPM3-211ENST00000368531 TRBV10-3A0A0K0K1G6 114 aa8.55□□□□□ -1.04
TPM3-211ENST00000368531 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
TPM3-211ENST00000368531 S100A7L2Q5SY68 101 aa8.55□□□□□ -1.04
TPM3-211ENST00000368531 COPS9Q8WXC6 57 aa8.55□□□□□ -1.04
TPM3-211ENST00000368531 TRBV10-2A0A0K0K1G8 114 aa8.54□□□□□ -1.04
TPM3-211ENST00000368531 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
TPM3-211ENST00000368531 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
TPM3-211ENST00000368531 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
TPM3-211ENST00000368531 SMIM6P0DI80 62 aa8.53□□□□□ -1.04
TPM3-211ENST00000368531 DDTP30046 118 aa8.53□□□□□ -1.04
TPM3-211ENST00000368531 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
TPM3-211ENST00000368531 PRO1933Q9H354 126 aa8.52□□□□□ -1.05
TPM3-211ENST00000368531 HIGD1BQ9P298 99 aa8.52□□□□□ -1.05
TPM3-211ENST00000368531 BCE1O60756 84 aa8.51□□□□□ -1.05
TPM3-211ENST00000368531 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
TPM3-211ENST00000368531 TMEM126AQ9H061 195 aa8.51□□□□□ -1.05
TPM3-211ENST00000368531 LOC100996750A0A140TA64 210 aa8.5□□□□□ -1.05
TPM3-211ENST00000368531 A4D1N5 150 aa8.5□□□□□ -1.05
TPM3-211ENST00000368531 UBE2AP49459 152 aa8.5□□□□□ -1.05
TPM3-211ENST00000368531 FAM19A1Q7Z5A9 133 aa8.5□□□□□ -1.05
TPM3-211ENST00000368531 KRTAP4-6Q9BYQ5 205 aa8.5□□□□□ -1.05
TPM3-211ENST00000368531 UQCR10Q9UDW1 63 aa8.5□□□□□ -1.05
TPM3-211ENST00000368531 A6NDN8 102 aa8.49□□□□□ -1.05
TPM3-211ENST00000368531 PRYO14603 147 aa8.49□□□□□ -1.05
TPM3-211ENST00000368531 IGLV6-57P01721 117 aa8.49□□□□□ -1.05
TPM3-211ENST00000368531 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
TPM3-211ENST00000368531 C12orf57Q99622 126 aa8.49□□□□□ -1.05
TPM3-211ENST00000368531 PPDPFQ9H3Y8 114 aa8.49□□□□□ -1.05
TPM3-211ENST00000368531 PRLHP81277 87 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms