RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 LINC00574Q9H8X3 128 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 V9GYH0 126 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 IGKV1OR2-108A0A075B7D4 117 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 A0A087WSZ3 146 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 TRBV7-1A0A0A6YYK4 115 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 SNRPGP15A8MWD9 76 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 H7BZZ5 65 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 M0R2N4 97 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 DSCR4P56555 118 aaPredicted RBP2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 ZNF79Q15937 498 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 SPANXN5Q5MJ07 72 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 C1orf134Q5TEV5 83 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 FAM27BQ5VT28 67 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 Q6ZQT0 140 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 IGKV1D-37A0A075B6S9 117 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 A8MUU9 505 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 C17orf98A8MV24 154 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 C11orf94C9JXX5 98 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 IGKV3-20P01619 116 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 COX8AP10176 69 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 PRB3Q04118 309 aaPredicted RBP2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 LYPD5Q6UWN5 251 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 VMO1Q7Z5L0 202 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 FAM167A-AS1Q96KT0 104 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 LITAFQ99732 161 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 AGRNO00468 2067 aa2.26□□□□□ -2.05
ECHDC1-205ENST00000368295 E7EUB6 86 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 BAALC-AS2P0C853 105 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 NNATQ16517 81 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 FAM229BQ4G0N7 80 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 CYB561D1Q8N8Q1 229 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 CYSTM1Q9H1C7 97 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 FAT3Q8TDW7 4589 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 IGLV10-54A0A075B6I4 117 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 IGHV3-53P01767 116 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 SMR3BP02814 79 aaPredicted RBP2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 MT3P25713 68 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 UBE2D3P61077 147 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 UBE2D2P62837 147 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 LY6EQ16553 131 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 PRO1854Q9UHT4 67 aa2.25□□□□□ -2.05
ECHDC1-205ENST00000368295 TRBV7-3A0A075B6L6 115 aa2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 IGHV1-18A0A0C4DH31 117 aa2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 HCG22E2RYF7 251 aa2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 H3BQ85 93 aa2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 IL4P05112 153 aa2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 GIG44P09565 113 aaPredicted RBP2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 ZNF56Q15929 161 aa2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 C10orf99Q6UWK7 81 aa2.24□□□□□ -2.05
ECHDC1-205ENST00000368295 SORL1Q92673 2214 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 A0A087WYN8 130 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 IGLV7-43P04211 117 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 COX6CP09669 75 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 MGST1P10620 155 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 ZNF22P17026 224 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 C6orf201Q7Z4U5 140 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 SPTSSBQ8NFR3 76 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 A0A0G2JND7 137 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 PANO1I0J062 215 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 IGKV3-11P04433 115 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 C3orf79P0CE67 100 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 HIGD2BQ4VC39 106 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 PYDC2Q56P42 97 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 Q6ZR54 194 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 TMEM254Q8TBM7 123 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 LIMD2Q9BT23 127 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 MANBALQ9NQG1 85 aa2.23□□□□□ -2.05
ECHDC1-205ENST00000368295 IGLV3-16A0A075B6K0 115 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 FXYD6-FXYD2A0A087WZ82 144 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 FXYD1O00168 92 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 ERC2-IT1O76042 136 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 HMGN2P05204 90 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 MIFP14174 115 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 HAMPP81172 84 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 C15orf32Q32M92 178 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 C9orf129Q5T035 196 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 FXYD6Q9H0Q3 95 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 TNCP24821 2201 aa2.22□□□□□ -2.05
ECHDC1-205ENST00000368295 TRBV25-1A0A075B6N4 114 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 IGHV3-64A0A075B6Q5 118 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 C11orf86A6NJI1 115 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 Q6ZR03 302 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 ZNF818PQ6ZRF7 136 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 Q8N6K4 173 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 RNF5Q99942 180 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 C22orf24Q9Y442 160 aa2.21□□□□□ -2.05
ECHDC1-205ENST00000368295 IGKV1D-42A0A075B6H8 117 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 TRAV23DV6A0A075B6W5 121 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 A0A1B0GWA3 101 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 NUPR2A6NF83 97 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 DEFA4P12838 97 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 GCHFRP30047 84 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 Q5W150 140 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 C2orf82Q6UX34 121 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 FAM223AQ8IWN6 122 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 C20orf166-AS1Q96NR2 134 aa2.21□□□□□ -2.06
ECHDC1-205ENST00000368295 TRAV22A0A0B4J277 110 aa2.2□□□□□ -2.06
ECHDC1-205ENST00000368295 MYMXA0A1B0GTQ4 84 aa2.2□□□□□ -2.06
ECHDC1-205ENST00000368295 NDUFAF8A1L188 74 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms