RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 KRTAP11-1Q8IUC1 163 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 LINC01600Q96MT4 127 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
CD48-202ENST00000368046 SCO1O75880 301 aa6.04□□□□□ -1.44
CD48-202ENST00000368046 IGLV7-43P04211 117 aa6.04□□□□□ -1.44
CD48-202ENST00000368046 COX17Q14061 63 aa6.04□□□□□ -1.44
CD48-202ENST00000368046 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
CD48-202ENST00000368046 HSPB8Q9UJY1 196 aa6.04□□□□□ -1.44
CD48-202ENST00000368046 FABP4P15090 132 aa6.03□□□□□ -1.44
CD48-202ENST00000368046 PFN2P35080 140 aa6.03□□□□□ -1.44
CD48-202ENST00000368046 ZNF625Q96I27 306 aaPredicted RBP6.03□□□□□ -1.44
CD48-202ENST00000368046 TP73-AS1Q9UF72 201 aa6.03□□□□□ -1.44
CD48-202ENST00000368046 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
CD48-202ENST00000368046 H0Y8G0 127 aa6.02□□□□□ -1.45
CD48-202ENST00000368046 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
CD48-202ENST00000368046 MRPL55Q7Z7F7 128 aaKnown RBP6.02□□□□□ -1.45
CD48-202ENST00000368046 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BKO60814 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BJP06899 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BOP23527 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BBP33778 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BDP58876 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BCP62807 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST2H2BEQ16778 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BHQ93079 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 LINC00167Q96N53 147 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BNQ99877 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 HIST1H2BMQ99879 126 aa6.01□□□□□ -1.45
CD48-202ENST00000368046 IGLV5-37A0A075B6J1 123 aa6□□□□□ -1.45
CD48-202ENST00000368046 KRTAP10-8P60410 259 aa6□□□□□ -1.45
CD48-202ENST00000368046 MAP1LC3CQ9BXW4 147 aa6□□□□□ -1.45
CD48-202ENST00000368046 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
CD48-202ENST00000368046 LINC00587B1AMM8 73 aa5.99□□□□□ -1.45
CD48-202ENST00000368046 DPM2O94777 84 aa5.99□□□□□ -1.45
CD48-202ENST00000368046 PLNP26678 52 aa5.99□□□□□ -1.45
CD48-202ENST00000368046 LINC00158P58513 81 aa5.99□□□□□ -1.45
CD48-202ENST00000368046 HERV-K104P63124 156 aa5.99□□□□□ -1.45
CD48-202ENST00000368046 RPL24P83731 157 aaKnown RBP5.99□□□□□ -1.45
CD48-202ENST00000368046 NKAPP1Q8N9T2 125 aa5.99□□□□□ -1.45
CD48-202ENST00000368046 H0Y9J4 135 aa5.98□□□□□ -1.45
CD48-202ENST00000368046 ZNF861PO60384 105 aa5.98□□□□□ -1.45
CD48-202ENST00000368046 IGKCP01834 107 aa5.98□□□□□ -1.45
CD48-202ENST00000368046 A0A0U1RRA0 63 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 MYMXA0A1B0GTQ4 84 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 GAGE10A6NGK3 116 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 RPL37AP8A6NKH3 93 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 LEPROTO15243 131 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 ATP6V1G1O75348 118 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 VPREB1P12018 145 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 NDUFA12Q9UI09 145 aa5.97□□□□□ -1.45
CD48-202ENST00000368046 SMIM13P0DJ93 91 aa5.96□□□□□ -1.46
CD48-202ENST00000368046 HERVK_113P61574 105 aa5.96□□□□□ -1.46
CD48-202ENST00000368046 PLEKHB2Q96CS7 222 aa5.96□□□□□ -1.46
CD48-202ENST00000368046 PMCHL2Q9BQD1 86 aa5.96□□□□□ -1.46
CD48-202ENST00000368046 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
CD48-202ENST00000368046 SYS1-DBNDD2H3BUS1 97 aa5.95□□□□□ -1.46
CD48-202ENST00000368046 J3QQQ9 107 aa5.95□□□□□ -1.46
CD48-202ENST00000368046 BCE1O60756 84 aa5.95□□□□□ -1.46
CD48-202ENST00000368046 S100A1P23297 94 aa5.95□□□□□ -1.46
CD48-202ENST00000368046 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
CD48-202ENST00000368046 COA6Q5JTJ3 125 aaKnown RBP5.95□□□□□ -1.46
CD48-202ENST00000368046 RPL28P46779 137 aaKnown RBP5.94□□□□□ -1.46
CD48-202ENST00000368046 PET117Q6UWS5 81 aa5.94□□□□□ -1.46
CD48-202ENST00000368046 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
CD48-202ENST00000368046 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
CD48-202ENST00000368046 NMUP48645 174 aa5.93□□□□□ -1.46
CD48-202ENST00000368046 TSPEAR-AS2P59090 65 aa5.93□□□□□ -1.46
CD48-202ENST00000368046 MIR7-3HGQ8N6C7 128 aa5.93□□□□□ -1.46
CD48-202ENST00000368046 Q8NDZ9 215 aa5.93□□□□□ -1.46
CD48-202ENST00000368046 E9PLD3 99 aa5.92□□□□□ -1.46
CD48-202ENST00000368046 M0R378 163 aa5.92□□□□□ -1.46
CD48-202ENST00000368046 KRTAP1-4P0C5Y4 121 aa5.92□□□□□ -1.46
CD48-202ENST00000368046 LGALS3P17931 250 aaKnown RBP5.92□□□□□ -1.46
CD48-202ENST00000368046 PRR26Q8N8Z3 221 aa5.92□□□□□ -1.46
CD48-202ENST00000368046 LOC107984156A0A0G2JMH3 177 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 C3orf79P0CE67 100 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 LINC01545Q5VT33 79 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 ARL17AQ8IVW1 177 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 BOD1L2Q8IYS8 172 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 TMEM126AQ9H061 195 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 TNXBP22105 4242 aa5.91□□□□□ -1.46
CD48-202ENST00000368046 IGKV2D-26A0A0A0MRZ7 120 aa5.9□□□□□ -1.46
CD48-202ENST00000368046 UBE2AP49459 152 aa5.9□□□□□ -1.46
CD48-202ENST00000368046 KRTAP13-1Q8IUC0 172 aa5.9□□□□□ -1.46
CD48-202ENST00000368046 TMEM238C9JI98 176 aa5.89□□□□□ -1.47
CD48-202ENST00000368046 A0A0J9YXY3 114 aa5.88□□□□□ -1.47
CD48-202ENST00000368046 RPL13AP40429 203 aaKnown RBP5.88□□□□□ -1.47
CD48-202ENST00000368046 KRTDAPP60985 99 aa5.88□□□□□ -1.47
CD48-202ENST00000368046 FAM19A1Q7Z5A9 133 aa5.88□□□□□ -1.47
CD48-202ENST00000368046 DAND5Q8N907 189 aa5.88□□□□□ -1.47
CD48-202ENST00000368046 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
CD48-202ENST00000368046 TRBV10-2A0A0K0K1G8 114 aa5.86□□□□□ -1.47
CD48-202ENST00000368046 PRLHP81277 87 aa5.86□□□□□ -1.47
CD48-202ENST00000368046 ADAMTSL4-AS1Q5T5F5 129 aa5.86□□□□□ -1.47
CD48-202ENST00000368046 MIEN1Q9BRT3 115 aa5.86□□□□□ -1.47
CD48-202ENST00000368046 C20orf202A1L168 122 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms