RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 LINC00846Q9NV44 126 aa5.2□□□□□ -1.58
SYNE1-208ENST00000367256 IGLV4-60A0A075B6I1 120 aa5.2□□□□□ -1.58
SYNE1-208ENST00000367256 A8MTW9 85 aa5.2□□□□□ -1.58
SYNE1-208ENST00000367256 PLA2G1BP04054 148 aaKnown RBP5.2□□□□□ -1.58
SYNE1-208ENST00000367256 C6orf48Q9UBA6 75 aa5.19□□□□□ -1.58
SYNE1-208ENST00000367256 FHL2Q14192 279 aa5.19□□□□□ -1.58
SYNE1-208ENST00000367256 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
SYNE1-208ENST00000367256 EDN2P20800 178 aa5.19□□□□□ -1.58
SYNE1-208ENST00000367256 Q6ZTC4 211 aa5.18□□□□□ -1.58
SYNE1-208ENST00000367256 ODF3L2Q3SX64 289 aa5.18□□□□□ -1.58
SYNE1-208ENST00000367256 PRO0461Q9UI25 63 aa5.18□□□□□ -1.58
SYNE1-208ENST00000367256 Q8N2B8 174 aa5.17□□□□□ -1.58
SYNE1-208ENST00000367256 ACYP2P14621 99 aa5.17□□□□□ -1.58
SYNE1-208ENST00000367256 EPG5Q9HCE0 2579 aa5.17□□□□□ -1.58
SYNE1-208ENST00000367256 C1orf134Q5TEV5 83 aa5.17□□□□□ -1.58
SYNE1-208ENST00000367256 IGLV5-45A0A087WSX0 123 aa5.16□□□□□ -1.58
SYNE1-208ENST00000367256 LOC110117498A0A087WWA1 95 aa5.16□□□□□ -1.58
SYNE1-208ENST00000367256 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
SYNE1-208ENST00000367256 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
SYNE1-208ENST00000367256 PRR15Q8IV56 129 aa5.16□□□□□ -1.58
SYNE1-208ENST00000367256 C8orf87E5RJ46 101 aa5.16□□□□□ -1.58
SYNE1-208ENST00000367256 IGLV1-51P01701 117 aa5.16□□□□□ -1.58
SYNE1-208ENST00000367256 SPINT4Q6UDR6 99 aa5.15□□□□□ -1.58
SYNE1-208ENST00000367256 Q6ZSN1 163 aa5.15□□□□□ -1.59
SYNE1-208ENST00000367256 C10orf142B7Z368 130 aa5.14□□□□□ -1.59
SYNE1-208ENST00000367256 LYPD5Q6UWN5 251 aa5.14□□□□□ -1.59
SYNE1-208ENST00000367256 ATP11AUNQ6ZP68 121 aa5.14□□□□□ -1.59
SYNE1-208ENST00000367256 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
SYNE1-208ENST00000367256 KIF25-AS1Q9Y6Z4 181 aa5.14□□□□□ -1.59
SYNE1-208ENST00000367256 MOBPQ13875 183 aa5.13□□□□□ -1.59
SYNE1-208ENST00000367256 SPACA4Q8TDM5 124 aa5.13□□□□□ -1.59
SYNE1-208ENST00000367256 SPATA3Q8NHX4 192 aa5.12□□□□□ -1.59
SYNE1-208ENST00000367256 CYP4F30PQ9H0H9 118 aa5.12□□□□□ -1.59
SYNE1-208ENST00000367256 KIAA0087Q14695 138 aa5.12□□□□□ -1.59
SYNE1-208ENST00000367256 Q6ZRU5 148 aa5.12□□□□□ -1.59
SYNE1-208ENST00000367256 SMCPP49901 116 aaPredicted RBP5.12□□□□□ -1.59
SYNE1-208ENST00000367256 TRAV22A0A0B4J277 110 aa5.11□□□□□ -1.59
SYNE1-208ENST00000367256 IGLV8-61A0A075B6I0 122 aa5.11□□□□□ -1.59
SYNE1-208ENST00000367256 C11orf72Q8NBR9 251 aa5.11□□□□□ -1.59
SYNE1-208ENST00000367256 SMR3AQ99954 134 aa5.11□□□□□ -1.59
SYNE1-208ENST00000367256 IGHV3OR16-9A0A0B4J2B5 98 aa5.11□□□□□ -1.59
SYNE1-208ENST00000367256 C22orf24Q9Y442 160 aa5.1□□□□□ -1.59
SYNE1-208ENST00000367256 SMCR5Q8TEV8 140 aa5.1□□□□□ -1.59
SYNE1-208ENST00000367256 AVPP01185 164 aa5.1□□□□□ -1.59
SYNE1-208ENST00000367256 C16orf95Q9H693 158 aa5.09□□□□□ -1.59
SYNE1-208ENST00000367256 FAM19A4Q96LR4 140 aa5.09□□□□□ -1.59
SYNE1-208ENST00000367256 SSBP3-AS1Q7Z2R9 100 aa5.09□□□□□ -1.59
SYNE1-208ENST00000367256 Q6ZQT0 140 aa5.09□□□□□ -1.6
SYNE1-208ENST00000367256 COL4A2P08572 1712 aa5.08□□□□□ -1.6
SYNE1-208ENST00000367256 Q6ZRX8 168 aa5.08□□□□□ -1.6
SYNE1-208ENST00000367256 ELOF1P60002 83 aaKnown RBP5.08□□□□□ -1.6
SYNE1-208ENST00000367256 Q8NBF4 154 aa5.07□□□□□ -1.6
SYNE1-208ENST00000367256 NHLRC4P0CG21 123 aaPredicted RBP5.07□□□□□ -1.6
SYNE1-208ENST00000367256 CDSNQ15517 529 aa5.07□□□□□ -1.6
SYNE1-208ENST00000367256 LINC00315P59091 139 aa5.06□□□□□ -1.6
SYNE1-208ENST00000367256 LINC00313P59037 77 aa5.06□□□□□ -1.6
SYNE1-208ENST00000367256 FAM218AQ96MZ4 157 aa5.06□□□□□ -1.6
SYNE1-208ENST00000367256 FHL3Q13643 280 aa5.06□□□□□ -1.6
SYNE1-208ENST00000367256 MDFIQ99750 246 aa5.05□□□□□ -1.6
SYNE1-208ENST00000367256 MAST4O15021 2626 aa5.05□□□□□ -1.6
SYNE1-208ENST00000367256 LINC00167Q96N53 147 aa5.05□□□□□ -1.6
SYNE1-208ENST00000367256 EPM2AB3EWF7 344 aa5.05□□□□□ -1.6
SYNE1-208ENST00000367256 TM2D3Q9BRN9 247 aa5.04□□□□□ -1.6
SYNE1-208ENST00000367256 H3BNG1 76 aa5.04□□□□□ -1.6
SYNE1-208ENST00000367256 CHTF8P0CG12 524 aa5.04□□□□□ -1.6
SYNE1-208ENST00000367256 BPTFQ12830 3046 aa5.04□□□□□ -1.6
SYNE1-208ENST00000367256 LINC00476Q8WZB0 136 aa5.04□□□□□ -1.6
SYNE1-208ENST00000367256 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
SYNE1-208ENST00000367256 TRBV7-4A0A0J9YYF1 115 aa5.03□□□□□ -1.6
SYNE1-208ENST00000367256 LOC101927531A0A1B0GV80 90 aa5.03□□□□□ -1.6
SYNE1-208ENST00000367256 LCA10Q71F78 164 aa5.03□□□□□ -1.6
SYNE1-208ENST00000367256 LINC01600Q96MT4 127 aa5.03□□□□□ -1.6
SYNE1-208ENST00000367256 ATRQ13535 2644 aa5.02□□□□□ -1.61
SYNE1-208ENST00000367256 GVQW2A0A096LPI5 108 aaPredicted RBP5.02□□□□□ -1.61
SYNE1-208ENST00000367256 MGAM2Q2M2H8 2515 aa5.02□□□□□ -1.61
SYNE1-208ENST00000367256 Q96NJ1 140 aa5.02□□□□□ -1.61
SYNE1-208ENST00000367256 RPL37AP61513 92 aaKnown RBP5.02□□□□□ -1.61
SYNE1-208ENST00000367256 COA5Q86WW8 74 aa5.01□□□□□ -1.61
SYNE1-208ENST00000367256 HECTD1Q9ULT8 2610 aa5.01□□□□□ -1.61
SYNE1-208ENST00000367256 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
SYNE1-208ENST00000367256 KRTAP10-9P60411 292 aa5.01□□□□□ -1.61
SYNE1-208ENST00000367256 C16orf90A8MZG2 172 aa5.01□□□□□ -1.61
SYNE1-208ENST00000367256 KLK9Q2XQG4 91 aa5□□□□□ -1.61
SYNE1-208ENST00000367256 RTL8CO15255 209 aa5□□□□□ -1.61
SYNE1-208ENST00000367256 A8MWP4 228 aa5□□□□□ -1.61
SYNE1-208ENST00000367256 TYMSOSQ8TAI1 123 aa5□□□□□ -1.61
SYNE1-208ENST00000367256 Q6ZRP5 223 aa5□□□□□ -1.61
SYNE1-208ENST00000367256 APLNQ9ULZ1 77 aa5□□□□□ -1.61
SYNE1-208ENST00000367256 IGLV6-57P01721 117 aa4.99□□□□□ -1.61
SYNE1-208ENST00000367256 AKAP13Q12802 2813 aa4.99□□□□□ -1.61
SYNE1-208ENST00000367256 PHF5AQ7RTV0 110 aaKnown RBP4.99□□□□□ -1.61
SYNE1-208ENST00000367256 LITAFQ99732 161 aa4.99□□□□□ -1.61
SYNE1-208ENST00000367256 CENPEQ02224 2701 aa4.98□□□□□ -1.61
SYNE1-208ENST00000367256 FAM229AH3BQW9 127 aa4.98□□□□□ -1.61
SYNE1-208ENST00000367256 FLNBO75369 2602 aaKnown RBP4.98□□□□□ -1.61
SYNE1-208ENST00000367256 ST20-AS1Q8NBB2 130 aa4.98□□□□□ -1.61
SYNE1-208ENST00000367256 UQCR11O14957 56 aa4.98□□□□□ -1.61
SYNE1-208ENST00000367256 PRO3102Q9H379 93 aa4.97□□□□□ -1.61
SYNE1-208ENST00000367256 LINC00336Q6ZUF6 198 aa4.97□□□□□ -1.61
SYNE1-208ENST00000367256 K7EQZ3 153 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms