RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 A0A1W2PNN7 141 aa9.7□□□□□ -0.86
PRKN-203ENST00000366894 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
PRKN-203ENST00000366894 TP73-AS1Q9UF72 201 aa9.69□□□□□ -0.86
PRKN-203ENST00000366894 C9orf129Q5T035 196 aaKnown RBP9.68□□□□□ -0.86
PRKN-203ENST00000366894 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
PRKN-203ENST00000366894 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
PRKN-203ENST00000366894 HIST1H2BLQ99880 126 aa9.68□□□□□ -0.86
PRKN-203ENST00000366894 XAGE1AQ9HD64 81 aa9.68□□□□□ -0.86
PRKN-203ENST00000366894 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
PRKN-203ENST00000366894 M0QXV9 152 aa9.67□□□□□ -0.86
PRKN-203ENST00000366894 UBE2BP63146 152 aa9.67□□□□□ -0.86
PRKN-203ENST00000366894 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
PRKN-203ENST00000366894 C5orf52A6NGY3 159 aa9.66□□□□□ -0.86
PRKN-203ENST00000366894 LRP1Q07954 4544 aaKnown RBP9.65□□□□□ -0.86
PRKN-203ENST00000366894 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
PRKN-203ENST00000366894 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
PRKN-203ENST00000366894 MRPL55Q7Z7F7 128 aaKnown RBP9.64□□□□□ -0.87
PRKN-203ENST00000366894 MIEN1Q9BRT3 115 aa9.64□□□□□ -0.87
PRKN-203ENST00000366894 FAT3Q8TDW7 4589 aa9.64□□□□□ -0.87
PRKN-203ENST00000366894 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
PRKN-203ENST00000366894 SMIM13P0DJ93 91 aa9.63□□□□□ -0.87
PRKN-203ENST00000366894 S100A12P80511 92 aa9.63□□□□□ -0.87
PRKN-203ENST00000366894 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
PRKN-203ENST00000366894 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
PRKN-203ENST00000366894 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
PRKN-203ENST00000366894 SCGB1D1O95968 90 aa9.61□□□□□ -0.87
PRKN-203ENST00000366894 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
PRKN-203ENST00000366894 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
PRKN-203ENST00000366894 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
PRKN-203ENST00000366894 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
PRKN-203ENST00000366894 IGKV2D-26A0A0A0MRZ7 120 aa9.59□□□□□ -0.87
PRKN-203ENST00000366894 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
PRKN-203ENST00000366894 TIMM17BO60830 172 aa9.59□□□□□ -0.87
PRKN-203ENST00000366894 SMCPP49901 116 aaPredicted RBP9.59□□□□□ -0.87
PRKN-203ENST00000366894 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
PRKN-203ENST00000366894 SPINK6Q6UWN8 80 aa9.59□□□□□ -0.87
PRKN-203ENST00000366894 OXTP01178 125 aa9.58□□□□□ -0.88
PRKN-203ENST00000366894 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
PRKN-203ENST00000366894 SCGB1D4Q6XE38 83 aa9.58□□□□□ -0.88
PRKN-203ENST00000366894 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
PRKN-203ENST00000366894 CBY1Q9Y3M2 126 aa9.58□□□□□ -0.88
PRKN-203ENST00000366894 LOC107984156A0A0G2JMH3 177 aa9.57□□□□□ -0.88
PRKN-203ENST00000366894 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
PRKN-203ENST00000366894 M0R378 163 aa9.57□□□□□ -0.88
PRKN-203ENST00000366894 ARL17AQ8IVW1 177 aa9.57□□□□□ -0.88
PRKN-203ENST00000366894 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
PRKN-203ENST00000366894 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
PRKN-203ENST00000366894 Q6ZVH6 145 aa9.56□□□□□ -0.88
PRKN-203ENST00000366894 TMEM238C9JI98 176 aa9.55□□□□□ -0.88
PRKN-203ENST00000366894 VPREB1P12018 145 aa9.55□□□□□ -0.88
PRKN-203ENST00000366894 REG3GQ6UW15 175 aa9.55□□□□□ -0.88
PRKN-203ENST00000366894 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
PRKN-203ENST00000366894 NDUFC2O95298 119 aa9.54□□□□□ -0.88
PRKN-203ENST00000366894 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
PRKN-203ENST00000366894 TRBV10-2A0A0K0K1G8 114 aa9.53□□□□□ -0.88
PRKN-203ENST00000366894 IGLV7-43P04211 117 aa9.53□□□□□ -0.88
PRKN-203ENST00000366894 DIRC1Q969H9 104 aa9.53□□□□□ -0.88
PRKN-203ENST00000366894 RPL28P46779 137 aaKnown RBP9.52□□□□□ -0.89
PRKN-203ENST00000366894 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
PRKN-203ENST00000366894 GAGE10A6NGK3 116 aa9.51□□□□□ -0.89
PRKN-203ENST00000366894 RPL37AP8A6NKH3 93 aa9.51□□□□□ -0.89
PRKN-203ENST00000366894 IFITM1P13164 125 aa9.51□□□□□ -0.89
PRKN-203ENST00000366894 LINC00518Q8N0U6 118 aa9.51□□□□□ -0.89
PRKN-203ENST00000366894 BCE1O60756 84 aa9.5□□□□□ -0.89
PRKN-203ENST00000366894 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRKN-203ENST00000366894 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
PRKN-203ENST00000366894 SPANXB1Q9NS25 103 aaPredicted RBP9.5□□□□□ -0.89
PRKN-203ENST00000366894 ZNF861PO60384 105 aa9.49□□□□□ -0.89
PRKN-203ENST00000366894 S100A7L2Q5SY68 101 aa9.49□□□□□ -0.89
PRKN-203ENST00000366894 DAND5Q8N907 189 aa9.49□□□□□ -0.89
PRKN-203ENST00000366894 PPDPFQ9H3Y8 114 aa9.49□□□□□ -0.89
PRKN-203ENST00000366894 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
PRKN-203ENST00000366894 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
PRKN-203ENST00000366894 JOSD1Q15040 202 aaPredicted RBP9.48□□□□□ -0.89
PRKN-203ENST00000366894 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
PRKN-203ENST00000366894 UBE2AP49459 152 aa9.47□□□□□ -0.89
PRKN-203ENST00000366894 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
PRKN-203ENST00000366894 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
PRKN-203ENST00000366894 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
PRKN-203ENST00000366894 HINT1P49773 126 aaPredicted RBP9.46□□□□□ -0.9
PRKN-203ENST00000366894 TMA7Q9Y2S6 64 aaKnown RBP9.46□□□□□ -0.9
PRKN-203ENST00000366894 PRYO14603 147 aa9.45□□□□□ -0.9
PRKN-203ENST00000366894 PCP2Q8IVA1 136 aa9.45□□□□□ -0.9
PRKN-203ENST00000366894 VAMP8Q9BV40 100 aa9.45□□□□□ -0.9
PRKN-203ENST00000366894 NCR3O14931 201 aa9.44□□□□□ -0.9
PRKN-203ENST00000366894 DDTP30046 118 aa9.44□□□□□ -0.9
PRKN-203ENST00000366894 LITAFQ99732 161 aa9.44□□□□□ -0.9
PRKN-203ENST00000366894 TMEM126AQ9H061 195 aa9.44□□□□□ -0.9
PRKN-203ENST00000366894 KCNQ1DNQ9H478 68 aa9.44□□□□□ -0.9
PRKN-203ENST00000366894 DLEU1O43261 78 aa9.43□□□□□ -0.9
PRKN-203ENST00000366894 NPC2P61916 151 aa9.43□□□□□ -0.9
PRKN-203ENST00000366894 TTTY13Q9BZ97 58 aa9.43□□□□□ -0.9
PRKN-203ENST00000366894 H0Y9J4 135 aa9.42□□□□□ -0.9
PRKN-203ENST00000366894 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
PRKN-203ENST00000366894 COX8AP10176 69 aa9.42□□□□□ -0.9
PRKN-203ENST00000366894 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
PRKN-203ENST00000366894 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
PRKN-203ENST00000366894 TNXBP22105 4242 aa9.42□□□□□ -0.9
PRKN-203ENST00000366894 ETDCA0A1B0GVM5 59 aa9.41□□□□□ -0.9
PRKN-203ENST00000366894 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms