RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SMIM13P0DJ93 91 aa5.17□□□□□ -1.58
MRPL55-211ENST00000366738 PFN2P35080 140 aa5.17□□□□□ -1.58
MRPL55-211ENST00000366738 MEIG1Q5JSS6 88 aa5.17□□□□□ -1.58
MRPL55-211ENST00000366738 SDIM1Q6ZPB5 146 aa5.17□□□□□ -1.58
MRPL55-211ENST00000366738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
MRPL55-211ENST00000366738 IGKV2-24A0A0C4DH68 120 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 NDUFC2-KCTD14E9PQ53 114 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 TLX1NBP0CAT3 122 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 PTTG1IPP53801 180 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 HERV-K104P63124 156 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 GAGE2BQ13066 116 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 GAGE2EQ4V326 116 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 SFTA2Q6UW10 78 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 DAND5Q8N907 189 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 LITAFQ99732 161 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 GAGE2DQ9UEU5 116 aa5.16□□□□□ -1.58
MRPL55-211ENST00000366738 COX8AP10176 69 aa5.15□□□□□ -1.59
MRPL55-211ENST00000366738 C9orf129Q5T035 196 aaKnown RBP5.15□□□□□ -1.59
MRPL55-211ENST00000366738 BOD1L2Q8IYS8 172 aa5.15□□□□□ -1.59
MRPL55-211ENST00000366738 SPACA4Q8TDM5 124 aa5.15□□□□□ -1.59
MRPL55-211ENST00000366738 XAGE1AQ9HD64 81 aa5.15□□□□□ -1.59
MRPL55-211ENST00000366738 FAM168BA1KXE4 195 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 LINC00158P58513 81 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 ADAMTSL4-AS1Q5T5F5 129 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 SCGB1D4Q6XE38 83 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 MIR7-3HGQ8N6C7 128 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 Q8NDZ9 215 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 C12orf57Q99622 126 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
MRPL55-211ENST00000366738 EIF4EBP3O60516 100 aaPredicted RBP5.13□□□□□ -1.59
MRPL55-211ENST00000366738 NPC2P61916 151 aa5.13□□□□□ -1.59
MRPL55-211ENST00000366738 S100A12P80511 92 aa5.13□□□□□ -1.59
MRPL55-211ENST00000366738 CIRBPQ14011 172 aaKnown RBP5.13□□□□□ -1.59
MRPL55-211ENST00000366738 COX17Q14061 63 aa5.13□□□□□ -1.59
MRPL55-211ENST00000366738 SOSTDC1Q6X4U4 206 aa5.13□□□□□ -1.59
MRPL55-211ENST00000366738 C2orf91Q6ZV80 131 aa5.13□□□□□ -1.59
MRPL55-211ENST00000366738 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
MRPL55-211ENST00000366738 SND1-IT1Q9HBX3 110 aa5.13□□□□□ -1.59
MRPL55-211ENST00000366738 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
MRPL55-211ENST00000366738 DLEU1O43261 78 aa5.12□□□□□ -1.59
MRPL55-211ENST00000366738 PRO1933Q9H354 126 aa5.12□□□□□ -1.59
MRPL55-211ENST00000366738 TIMM17BO60830 172 aa5.11□□□□□ -1.59
MRPL55-211ENST00000366738 SLC25A34Q6PIV7 304 aa5.11□□□□□ -1.59
MRPL55-211ENST00000366738 FAM19A5Q7Z5A7 132 aaPredicted RBP5.11□□□□□ -1.59
MRPL55-211ENST00000366738 LINC00518Q8N0U6 118 aa5.11□□□□□ -1.59
MRPL55-211ENST00000366738 PKIGQ9Y2B9 76 aa5.11□□□□□ -1.59
MRPL55-211ENST00000366738 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
MRPL55-211ENST00000366738 A0A087WYN8 130 aa5.1□□□□□ -1.59
MRPL55-211ENST00000366738 LINC00587B1AMM8 73 aa5.1□□□□□ -1.59
MRPL55-211ENST00000366738 TMEM238C9JI98 176 aa5.1□□□□□ -1.59
MRPL55-211ENST00000366738 SPANXDQ9BXN6 97 aa5.1□□□□□ -1.59
MRPL55-211ENST00000366738 SPANXCQ9NY87 97 aa5.1□□□□□ -1.59
MRPL55-211ENST00000366738 LPAP08519 4548 aa5.1□□□□□ -1.59
MRPL55-211ENST00000366738 VPREB1P12018 145 aa5.09□□□□□ -1.59
MRPL55-211ENST00000366738 LINC00308Q8TCZ7 52 aa5.09□□□□□ -1.59
MRPL55-211ENST00000366738 SPANXB1Q9NS25 103 aaPredicted RBP5.09□□□□□ -1.59
MRPL55-211ENST00000366738 UQCR10Q9UDW1 63 aa5.09□□□□□ -1.59
MRPL55-211ENST00000366738 NCR3O14931 201 aa5.08□□□□□ -1.6
MRPL55-211ENST00000366738 PHF5AQ7RTV0 110 aaKnown RBP5.08□□□□□ -1.6
MRPL55-211ENST00000366738 PLAC8Q9NZF1 115 aa5.08□□□□□ -1.6
MRPL55-211ENST00000366738 HIGD1BQ9P298 99 aa5.08□□□□□ -1.6
MRPL55-211ENST00000366738 LINC00474Q9P2X8 69 aa5.08□□□□□ -1.6
MRPL55-211ENST00000366738 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 M0QXV9 152 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 PRR3P79522 188 aaKnown RBP5.07□□□□□ -1.6
MRPL55-211ENST00000366738 MUSTN1Q8IVN3 82 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 DPH3Q96FX2 82 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 MIEN1Q9BRT3 115 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 MUC2Q02817 5179 aa5.07□□□□□ -1.6
MRPL55-211ENST00000366738 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
MRPL55-211ENST00000366738 SRSF9Q13242 221 aaKnown RBP eCLIP5.06□□□□□ -1.6
MRPL55-211ENST00000366738 KRTAP11-1Q8IUC1 163 aa5.06□□□□□ -1.6
MRPL55-211ENST00000366738 HIST1H4GQ99525 98 aa5.06□□□□□ -1.6
MRPL55-211ENST00000366738 C22orf24Q9Y442 160 aa5.06□□□□□ -1.6
MRPL55-211ENST00000366738 IGKV2-28A0A075B6P5 120 aa5.05□□□□□ -1.6
MRPL55-211ENST00000366738 GAGE10A6NGK3 116 aa5.05□□□□□ -1.6
MRPL55-211ENST00000366738 IGKV2D-28P01615 120 aa5.05□□□□□ -1.6
MRPL55-211ENST00000366738 IFITM1P13164 125 aa5.05□□□□□ -1.6
MRPL55-211ENST00000366738 Q6ZVH6 145 aa5.05□□□□□ -1.6
MRPL55-211ENST00000366738 C7orf33Q8WU49 177 aa5.05□□□□□ -1.6
MRPL55-211ENST00000366738 A4D1N5 150 aa5.04□□□□□ -1.6
MRPL55-211ENST00000366738 TSTD3H0UI37 97 aa5.04□□□□□ -1.6
MRPL55-211ENST00000366738 FXYD2P54710 66 aa5.04□□□□□ -1.6
MRPL55-211ENST00000366738 MRPL55Q7Z7F7 128 aaKnown RBP5.04□□□□□ -1.6
MRPL55-211ENST00000366738 NKAPP1Q8N9T2 125 aa5.04□□□□□ -1.6
MRPL55-211ENST00000366738 RPL37AP8A6NKH3 93 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 NDUFC2O95298 119 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
MRPL55-211ENST00000366738 HSD52Q0P140 79 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 CEND1Q8N111 149 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 LINC00337Q8N6G1 96 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 LINC01600Q96MT4 127 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 LINC00167Q96N53 147 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 PPDPFQ9H3Y8 114 aa5.03□□□□□ -1.6
MRPL55-211ENST00000366738 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
MRPL55-211ENST00000366738 M0R378 163 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms