RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 A0A087X002 238 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 A0A1B0GX51 115 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 IGKV2-29A2NJV5 120 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 CAMPP49913 170 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 PMVKQ15126 192 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 GAGE2EQ4V326 116 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 SPANXN1Q5VSR9 72 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 Q6ZUT4 128 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 OPRPNQ99935 248 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 GAGE2DQ9UEU5 116 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 SMIM27A0A1W2PRY6 76 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 E9PLD3 99 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 M0QXV9 152 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 UBE2L6O14933 153 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 APOMO95445 188 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 IFITM1P13164 125 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 TPRXLQ17RH7 258 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 LINC01545Q5VT33 79 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 OCC1Q8TAD7 63 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 PPDPFLQ8WWR9 84 aa4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 CSDC2Q9Y534 153 aaKnown RBP4.93□□□□□ -1.62
HMGB1P39-201ENST00000366304 LINC00959A0A1B0GUT2 108 aa4.92□□□□□ -1.62
HMGB1P39-201ENST00000366304 C19orf71A6NCJ1 209 aa4.92□□□□□ -1.62
HMGB1P39-201ENST00000366304 FGF6P10767 208 aa4.92□□□□□ -1.62
HMGB1P39-201ENST00000366304 FAM231DQ6ZW35 169 aa4.92□□□□□ -1.62
HMGB1P39-201ENST00000366304 PKIGQ9Y2B9 76 aa4.92□□□□□ -1.62
HMGB1P39-201ENST00000366304 V9GYV3 84 aa4.92□□□□□ -1.62
HMGB1P39-201ENST00000366304 K7EN84 100 aa4.91□□□□□ -1.62
HMGB1P39-201ENST00000366304 NDUFV3P56181 108 aaKnown RBP4.91□□□□□ -1.62
HMGB1P39-201ENST00000366304 RPL18AQ02543 176 aaKnown RBP4.91□□□□□ -1.62
HMGB1P39-201ENST00000366304 RNASEKQ6P5S7 137 aaKnown RBP4.91□□□□□ -1.62
HMGB1P39-201ENST00000366304 C2orf91Q6ZV80 131 aa4.91□□□□□ -1.62
HMGB1P39-201ENST00000366304 ATOH7Q8N100 152 aa4.91□□□□□ -1.62
HMGB1P39-201ENST00000366304 FAM19A2Q8N3H0 131 aa4.91□□□□□ -1.62
HMGB1P39-201ENST00000366304 A0A1B0GWB2 263 aa4.9□□□□□ -1.63
HMGB1P39-201ENST00000366304 J3KT08 172 aa4.9□□□□□ -1.63
HMGB1P39-201ENST00000366304 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
HMGB1P39-201ENST00000366304 IGLV7-46A0A075B6I9 117 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 F2Z2F3 143 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 SNCGO76070 127 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 IGLC6P0CF74 106 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 ETDBQ3ZM63 59 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 KRTAP13-2Q52LG2 175 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 FAM19A5Q7Z5A7 132 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 RNASE7Q9H1E1 156 aaKnown RBP4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 ANAPC11Q9NYG5 84 aa4.89□□□□□ -1.63
HMGB1P39-201ENST00000366304 TRBV20-1A0A075B6N2 111 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 KIAA1644Q3SXP7 199 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 C10orf25Q5T742 122 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 CD164L2Q6UWJ8 174 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 GATD1Q8NB37 220 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 PRELID3AQ96N28 172 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 CAMK2N2Q96S95 79 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
HMGB1P39-201ENST00000366304 MT-ATP8P03928 68 aa4.87□□□□□ -1.63
HMGB1P39-201ENST00000366304 CRYGAP11844 174 aa4.87□□□□□ -1.63
HMGB1P39-201ENST00000366304 MT1HP80294 61 aa4.87□□□□□ -1.63
HMGB1P39-201ENST00000366304 TEN1Q86WV5 123 aa4.87□□□□□ -1.63
HMGB1P39-201ENST00000366304 RPL39LQ96EH5 51 aaKnown RBP4.87□□□□□ -1.63
HMGB1P39-201ENST00000366304 PRO0461Q9UI25 63 aa4.87□□□□□ -1.63
HMGB1P39-201ENST00000366304 A8MWL6 223 aa4.86□□□□□ -1.63
HMGB1P39-201ENST00000366304 ZNF861PO60384 105 aa4.86□□□□□ -1.63
HMGB1P39-201ENST00000366304 ASB16-AS1Q495Z4 193 aa4.86□□□□□ -1.63
HMGB1P39-201ENST00000366304 TYMSOSQ8TAI1 123 aa4.86□□□□□ -1.63
HMGB1P39-201ENST00000366304 C2orf48Q96LS8 159 aa4.86□□□□□ -1.63
HMGB1P39-201ENST00000366304 H7C423 109 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 SCGB1C2P0DMR2 95 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 SS18Q15532 418 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 LYZL1Q6UWQ5 148 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 CEND1Q8N111 149 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 C20orf78Q9BR46 151 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 CNFNQ9BYD5 112 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 PPDPFQ9H3Y8 114 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
HMGB1P39-201ENST00000366304 C9JAW5 83 aa4.84□□□□□ -1.63
HMGB1P39-201ENST00000366304 COX7A2LO14548 114 aa4.84□□□□□ -1.63
HMGB1P39-201ENST00000366304 FOXA3P55318 350 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P39-201ENST00000366304 HBBP68871 147 aa4.84□□□□□ -1.63
HMGB1P39-201ENST00000366304 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
HMGB1P39-201ENST00000366304 C5orf38Q86SI9 138 aa4.84□□□□□ -1.63
HMGB1P39-201ENST00000366304 A0A1B0GXF2 115 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 HIGD1CA8MV81 97 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 NCR2O95944 276 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 TSHBP01222 138 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 MALP21145 153 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 UBE2BP63146 152 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 SPAG11BQ08648 103 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 TWIST1Q15672 202 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 RNASE13Q5GAN3 156 aaKnown RBP4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 UNQ6190/PRO20217Q6UXQ8 127 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 C6orf48Q9UBA6 75 aa4.83□□□□□ -1.64
HMGB1P39-201ENST00000366304 SDHAF1A6NFY7 115 aa4.82□□□□□ -1.64
HMGB1P39-201ENST00000366304 UQCRQO14949 82 aa4.82□□□□□ -1.64
HMGB1P39-201ENST00000366304 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms