RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 LINC00269Q8N2A0 174 aa4.95□□□□□ -1.62
CLCN3-202ENST00000360642 ACYP1P07311 99 aa4.95□□□□□ -1.62
CLCN3-202ENST00000360642 CELA1Q9UNI1 258 aa4.95□□□□□ -1.62
CLCN3-202ENST00000360642 HIVEP1P15822 2718 aa4.94□□□□□ -1.62
CLCN3-202ENST00000360642 A0A087WYN8 130 aa4.94□□□□□ -1.62
CLCN3-202ENST00000360642 H0YGX0 51 aa4.94□□□□□ -1.62
CLCN3-202ENST00000360642 MIFP14174 115 aa4.94□□□□□ -1.62
CLCN3-202ENST00000360642 DAD1P61803 113 aa4.94□□□□□ -1.62
CLCN3-202ENST00000360642 SDIM1Q6ZPB5 146 aa4.94□□□□□ -1.62
CLCN3-202ENST00000360642 WFDC9Q8NEX5 89 aa4.94□□□□□ -1.62
CLCN3-202ENST00000360642 RPL37AP8A6NKH3 93 aa4.93□□□□□ -1.62
CLCN3-202ENST00000360642 REG3AQ06141 175 aa4.93□□□□□ -1.62
CLCN3-202ENST00000360642 COX17Q14061 63 aa4.93□□□□□ -1.62
CLCN3-202ENST00000360642 CHCHD10Q8WYQ3 142 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-202ENST00000360642 NSD1Q96L73 2696 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-202ENST00000360642 ATP5G1P05496 136 aa4.93□□□□□ -1.62
CLCN3-202ENST00000360642 TTC32Q5I0X7 151 aa4.93□□□□□ -1.62
CLCN3-202ENST00000360642 CXCL5P42830 114 aa4.93□□□□□ -1.62
CLCN3-202ENST00000360642 TRBV7-7A0A0K0K1E9 115 aa4.92□□□□□ -1.62
CLCN3-202ENST00000360642 ANGP03950 147 aaKnown RBP4.92□□□□□ -1.62
CLCN3-202ENST00000360642 IGKV2-30P06310 120 aa4.92□□□□□ -1.62
CLCN3-202ENST00000360642 ANAPC13Q9BS18 74 aa4.92□□□□□ -1.62
CLCN3-202ENST00000360642 NDUFC2O95298 119 aa4.92□□□□□ -1.62
CLCN3-202ENST00000360642 OBSCN-AS1Q96MR7 158 aa4.92□□□□□ -1.62
CLCN3-202ENST00000360642 PKD1L1Q8TDX9 2849 aa4.92□□□□□ -1.62
CLCN3-202ENST00000360642 SPART-AS1P0CW21 52 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 SMCR5Q8TEV8 140 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 IGLV10-54A0A075B6I4 117 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 INAFM2P0DMQ5 153 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 LELP1Q5T871 98 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 DNAL4O96015 105 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 C9orf129Q5T035 196 aaKnown RBP4.91□□□□□ -1.62
CLCN3-202ENST00000360642 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 PRR34Q9NV39 138 aa4.91□□□□□ -1.62
CLCN3-202ENST00000360642 A0A087X002 238 aa4.9□□□□□ -1.62
CLCN3-202ENST00000360642 KLK5Q9Y337 293 aaPredicted RBP4.9□□□□□ -1.62
CLCN3-202ENST00000360642 LECT2O14960 151 aa4.9□□□□□ -1.63
CLCN3-202ENST00000360642 HTN3P15516 51 aa4.9□□□□□ -1.63
CLCN3-202ENST00000360642 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
CLCN3-202ENST00000360642 LINC00167Q96N53 147 aa4.9□□□□□ -1.63
CLCN3-202ENST00000360642 C9orf116Q5BN46 136 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-202ENST00000360642 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
CLCN3-202ENST00000360642 IMUPQ9GZP8 106 aa4.89□□□□□ -1.63
CLCN3-202ENST00000360642 LINC00526Q96FQ7 95 aa4.89□□□□□ -1.63
CLCN3-202ENST00000360642 RETNQ9HD89 108 aa4.89□□□□□ -1.63
CLCN3-202ENST00000360642 Q8NDZ9 215 aa4.89□□□□□ -1.63
CLCN3-202ENST00000360642 A0A1B0GX51 115 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 ENHOQ6UWT2 76 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 ANK2Q01484 3957 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 A0A0J9YWU9 116 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 LYPD5Q6UWN5 251 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 MUC7Q8TAX7 377 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 BAHCC1Q9P281 2608 aa4.88□□□□□ -1.63
CLCN3-202ENST00000360642 C6orf223Q8N319 242 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 UNQ6190/PRO20217Q6UXQ8 127 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 Q8N814 137 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 ORMDL1Q9P0S3 153 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 F8P00451 2351 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 SPAG11BQ08648 103 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 C14orf132Q9NPU4 83 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 KLK12Q9UKR0 248 aa4.87□□□□□ -1.63
CLCN3-202ENST00000360642 CYSRT1A8MQ03 144 aa4.86□□□□□ -1.63
CLCN3-202ENST00000360642 GVQW2A0A096LPI5 108 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-202ENST00000360642 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
CLCN3-202ENST00000360642 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
CLCN3-202ENST00000360642 H3BNG1 76 aa4.85□□□□□ -1.63
CLCN3-202ENST00000360642 NCR3O14931 201 aa4.85□□□□□ -1.63
CLCN3-202ENST00000360642 CMYA5Q8N3K9 4069 aa4.85□□□□□ -1.63
CLCN3-202ENST00000360642 STAB1Q9NY15 2570 aa4.85□□□□□ -1.63
CLCN3-202ENST00000360642 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
CLCN3-202ENST00000360642 KRTAP10-11P60412 298 aa4.85□□□□□ -1.63
CLCN3-202ENST00000360642 FBN1P35555 2871 aaKnown RBP4.85□□□□□ -1.63
CLCN3-202ENST00000360642 TENM3Q9P273 2699 aa4.84□□□□□ -1.63
CLCN3-202ENST00000360642 C6orf99Q4VX62 202 aa4.84□□□□□ -1.63
CLCN3-202ENST00000360642 TMEM256-PLSCR3K7ERE1 68 aa4.84□□□□□ -1.63
CLCN3-202ENST00000360642 IGLV6-57P01721 117 aa4.84□□□□□ -1.63
CLCN3-202ENST00000360642 MAST4O15021 2626 aa4.84□□□□□ -1.64
CLCN3-202ENST00000360642 KRTAP26-1Q6PEX3 210 aa4.84□□□□□ -1.64
CLCN3-202ENST00000360642 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.64
CLCN3-202ENST00000360642 LINC00846Q9NV44 126 aa4.84□□□□□ -1.64
CLCN3-202ENST00000360642 C6orf48Q9UBA6 75 aa4.84□□□□□ -1.64
CLCN3-202ENST00000360642 NOTCH1P46531 2555 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 FAM236AA0A1B0GUQ0 79 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 FAM236BA0A1B0GV22 79 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 JMJD7-PLA2G4BH0Y9G9 81 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 CCKP06307 115 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 EGFEM1PQ0D2K5 195 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 S100A7L2Q5SY68 101 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 KPRPQ5T749 579 aaPredicted RBP4.83□□□□□ -1.64
CLCN3-202ENST00000360642 WFDC10BQ8IUB3 73 aa4.83□□□□□ -1.64
CLCN3-202ENST00000360642 DNAH3Q8TD57 4116 aa4.82□□□□□ -1.64
CLCN3-202ENST00000360642 HIST1H4AP62805 103 aaKnown RBP4.82□□□□□ -1.64
CLCN3-202ENST00000360642 Q6ZTC4 211 aa4.82□□□□□ -1.64
CLCN3-202ENST00000360642 Q6JHZ5 121 aa4.81□□□□□ -1.64
CLCN3-202ENST00000360642 RPL18AQ02543 176 aaKnown RBP4.81□□□□□ -1.64
CLCN3-202ENST00000360642 C3orf56Q8N813 242 aa4.81□□□□□ -1.64
CLCN3-202ENST00000360642 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
CLCN3-202ENST00000360642 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms