RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
SRGAP3-201ENST00000360413 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
SRGAP3-201ENST00000360413 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
SRGAP3-201ENST00000360413 IGLV4-60A0A075B6I1 120 aa9.38□□□□□ -0.91
SRGAP3-201ENST00000360413 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
SRGAP3-201ENST00000360413 FAM19A4Q96LR4 140 aa9.36□□□□□ -0.91
SRGAP3-201ENST00000360413 C16orf95Q9H693 158 aa9.36□□□□□ -0.91
SRGAP3-201ENST00000360413 SPATA3Q8NHX4 192 aa9.36□□□□□ -0.91
SRGAP3-201ENST00000360413 IGLV8-61A0A075B6I0 122 aa9.35□□□□□ -0.91
SRGAP3-201ENST00000360413 BPTFQ12830 3046 aa9.35□□□□□ -0.91
SRGAP3-201ENST00000360413 CD164Q04900 197 aa9.35□□□□□ -0.91
SRGAP3-201ENST00000360413 PRO0461Q9UI25 63 aa9.34□□□□□ -0.91
SRGAP3-201ENST00000360413 SSBP3-AS1Q7Z2R9 100 aa9.33□□□□□ -0.92
SRGAP3-201ENST00000360413 C18orf65Q6ZTR6 163 aa9.33□□□□□ -0.92
SRGAP3-201ENST00000360413 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
SRGAP3-201ENST00000360413 C19orf84I3L1E1 186 aa9.33□□□□□ -0.92
SRGAP3-201ENST00000360413 WISP2O76076 250 aa9.32□□□□□ -0.92
SRGAP3-201ENST00000360413 LINC00313P59037 77 aa9.32□□□□□ -0.92
SRGAP3-201ENST00000360413 FHL2Q14192 279 aa9.32□□□□□ -0.92
SRGAP3-201ENST00000360413 MUC22E2RYF6 1773 aaPredicted RBP9.32□□□□□ -0.92
SRGAP3-201ENST00000360413 OXLD1Q5BKU9 147 aa9.31□□□□□ -0.92
SRGAP3-201ENST00000360413 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
SRGAP3-201ENST00000360413 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
SRGAP3-201ENST00000360413 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
SRGAP3-201ENST00000360413 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
SRGAP3-201ENST00000360413 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
SRGAP3-201ENST00000360413 CEP295Q9C0D2 2601 aa9.28□□□□□ -0.92
SRGAP3-201ENST00000360413 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
SRGAP3-201ENST00000360413 H3BNG1 76 aa9.27□□□□□ -0.93
SRGAP3-201ENST00000360413 MOBPQ13875 183 aa9.27□□□□□ -0.93
SRGAP3-201ENST00000360413 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.93
SRGAP3-201ENST00000360413 Q8NBF4 154 aa9.27□□□□□ -0.93
SRGAP3-201ENST00000360413 CR1P17927 2039 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 Q6ZSN1 163 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 SPACA4Q8TDM5 124 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 LINC01546A6NGU7 62 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 A8MUN3 132 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 A0A1W2PNU3 283 aaPredicted RBP9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 Q6ZQT0 140 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 FAM218AQ96MZ4 157 aa9.26□□□□□ -0.93
SRGAP3-201ENST00000360413 PRRC2CQ9Y520 2896 aaKnown RBP9.25□□□□□ -0.93
SRGAP3-201ENST00000360413 Q6ZRP5 223 aa9.25□□□□□ -0.93
SRGAP3-201ENST00000360413 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
SRGAP3-201ENST00000360413 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
SRGAP3-201ENST00000360413 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
SRGAP3-201ENST00000360413 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
SRGAP3-201ENST00000360413 LINC00336Q6ZUF6 198 aa9.23□□□□□ -0.93
SRGAP3-201ENST00000360413 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
SRGAP3-201ENST00000360413 LOC110117498A0A087WWA1 95 aa9.23□□□□□ -0.93
SRGAP3-201ENST00000360413 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
SRGAP3-201ENST00000360413 FHL3Q13643 280 aa9.22□□□□□ -0.93
SRGAP3-201ENST00000360413 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.94
SRGAP3-201ENST00000360413 Q6ZRU5 148 aa9.2□□□□□ -0.94
SRGAP3-201ENST00000360413 COA5Q86WW8 74 aa9.19□□□□□ -0.94
SRGAP3-201ENST00000360413 LINC01600Q96MT4 127 aa9.18□□□□□ -0.94
SRGAP3-201ENST00000360413 HECTD1Q9ULT8 2610 aa9.18□□□□□ -0.94
SRGAP3-201ENST00000360413 UQCR11O14957 56 aa9.18□□□□□ -0.94
SRGAP3-201ENST00000360413 LCA10Q71F78 164 aa9.17□□□□□ -0.94
SRGAP3-201ENST00000360413 ERC2-IT1O76042 136 aa9.16□□□□□ -0.94
SRGAP3-201ENST00000360413 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
SRGAP3-201ENST00000360413 MAST4O15021 2626 aa9.15□□□□□ -0.94
SRGAP3-201ENST00000360413 Q6ZRX8 168 aa9.14□□□□□ -0.95
SRGAP3-201ENST00000360413 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
SRGAP3-201ENST00000360413 ELOF1P60002 83 aaKnown RBP9.14□□□□□ -0.95
SRGAP3-201ENST00000360413 J3QL48 77 aa9.14□□□□□ -0.95
SRGAP3-201ENST00000360413 TRBV7-4A0A0J9YYF1 115 aa9.13□□□□□ -0.95
SRGAP3-201ENST00000360413 LUZP6Q538Z0 58 aa9.13□□□□□ -0.95
SRGAP3-201ENST00000360413 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
SRGAP3-201ENST00000360413 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
SRGAP3-201ENST00000360413 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
SRGAP3-201ENST00000360413 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
SRGAP3-201ENST00000360413 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
SRGAP3-201ENST00000360413 LINC00167Q96N53 147 aa9.1□□□□□ -0.95
SRGAP3-201ENST00000360413 A8MWP4 228 aa9.09□□□□□ -0.95
SRGAP3-201ENST00000360413 KLKP1Q107X0 134 aa9.08□□□□□ -0.96
SRGAP3-201ENST00000360413 Q96NJ1 140 aa9.08□□□□□ -0.96
SRGAP3-201ENST00000360413 IGLV5-45A0A087WSX0 123 aa9.07□□□□□ -0.96
SRGAP3-201ENST00000360413 ATRQ13535 2644 aa9.07□□□□□ -0.96
SRGAP3-201ENST00000360413 PRR15Q8IV56 129 aa9.07□□□□□ -0.96
SRGAP3-201ENST00000360413 MGAM2Q2M2H8 2515 aa9.06□□□□□ -0.96
SRGAP3-201ENST00000360413 RTL8CO15255 209 aa9.05□□□□□ -0.96
SRGAP3-201ENST00000360413 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
SRGAP3-201ENST00000360413 K7EQZ3 153 aa9.05□□□□□ -0.96
SRGAP3-201ENST00000360413 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
SRGAP3-201ENST00000360413 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
SRGAP3-201ENST00000360413 H7BZZ5 65 aa9.03□□□□□ -0.96
SRGAP3-201ENST00000360413 SRCAPQ6ZRS2 3230 aa9.03□□□□□ -0.96
SRGAP3-201ENST00000360413 NBDYA0A0U1RRE5 68 aa9.02□□□□□ -0.96
SRGAP3-201ENST00000360413 AKAP13Q12802 2813 aa9.02□□□□□ -0.96
SRGAP3-201ENST00000360413 CFAP46Q8IYW2 2715 aa9.01□□□□□ -0.97
SRGAP3-201ENST00000360413 MRPL34Q9BQ48 92 aaKnown RBP9.01□□□□□ -0.97
SRGAP3-201ENST00000360413 AVPP01185 164 aa8.99□□□□□ -0.97
SRGAP3-201ENST00000360413 LINC00315P59091 139 aa8.99□□□□□ -0.97
SRGAP3-201ENST00000360413 STAB1Q9NY15 2570 aa8.99□□□□□ -0.97
SRGAP3-201ENST00000360413 ST20-AS1Q8NBB2 130 aa8.99□□□□□ -0.97
SRGAP3-201ENST00000360413 SMR3AQ99954 134 aa8.98□□□□□ -0.97
SRGAP3-201ENST00000360413 CDC42SE1Q9NRR8 79 aa8.97□□□□□ -0.97
SRGAP3-201ENST00000360413 WWC2-AS2Q96NR7 200 aa8.97□□□□□ -0.97
SRGAP3-201ENST00000360413 DNAH10OSP0CZ25 163 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms