RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 XGP55808 180 aa9.65□□□□□ -0.87
TPM1-206ENST00000358278 C14orf144Q96I85 54 aa9.65□□□□□ -0.87
TPM1-206ENST00000358278 PLAC8Q9NZF1 115 aa9.65□□□□□ -0.87
TPM1-206ENST00000358278 TP73-AS1Q9UF72 201 aa9.65□□□□□ -0.87
TPM1-206ENST00000358278 A0A1W2PNN7 141 aa9.64□□□□□ -0.87
TPM1-206ENST00000358278 TMEM238C9JI98 176 aa9.64□□□□□ -0.87
TPM1-206ENST00000358278 MIEN1Q9BRT3 115 aa9.64□□□□□ -0.87
TPM1-206ENST00000358278 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
TPM1-206ENST00000358278 BOD1L2Q8IYS8 172 aa9.63□□□□□ -0.87
TPM1-206ENST00000358278 BIRC6Q9NR09 4857 aa9.63□□□□□ -0.87
TPM1-206ENST00000358278 LITAFQ99732 161 aa9.62□□□□□ -0.87
TPM1-206ENST00000358278 NPC2P61916 151 aa9.62□□□□□ -0.87
TPM1-206ENST00000358278 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
TPM1-206ENST00000358278 SERTAD4-AS1Q5TG53 156 aa9.61□□□□□ -0.87
TPM1-206ENST00000358278 M0QXV9 152 aa9.6□□□□□ -0.87
TPM1-206ENST00000358278 DLEU1O43261 78 aa9.6□□□□□ -0.87
TPM1-206ENST00000358278 PLA2G2DQ9UNK4 145 aa9.6□□□□□ -0.87
TPM1-206ENST00000358278 KIAA1109Q2LD37 5005 aa9.6□□□□□ -0.87
TPM1-206ENST00000358278 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
TPM1-206ENST00000358278 NKAPP1Q8N9T2 125 aa9.59□□□□□ -0.87
TPM1-206ENST00000358278 SPANXDQ9BXN6 97 aa9.59□□□□□ -0.87
TPM1-206ENST00000358278 SPANXCQ9NY87 97 aa9.59□□□□□ -0.87
TPM1-206ENST00000358278 HSPG2P98160 4391 aa9.59□□□□□ -0.87
TPM1-206ENST00000358278 KRTAP7-1Q8IUC3 87 aa9.59□□□□□ -0.87
TPM1-206ENST00000358278 RYR1P21817 5038 aa9.58□□□□□ -0.88
TPM1-206ENST00000358278 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
TPM1-206ENST00000358278 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
TPM1-206ENST00000358278 VPREB1P12018 145 aa9.57□□□□□ -0.88
TPM1-206ENST00000358278 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
TPM1-206ENST00000358278 Q6ZVH6 145 aa9.57□□□□□ -0.88
TPM1-206ENST00000358278 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
TPM1-206ENST00000358278 LINC00308Q8TCZ7 52 aa9.57□□□□□ -0.88
TPM1-206ENST00000358278 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
TPM1-206ENST00000358278 C22orf24Q9Y442 160 aa9.57□□□□□ -0.88
TPM1-206ENST00000358278 LOC107984156A0A0G2JMH3 177 aa9.56□□□□□ -0.88
TPM1-206ENST00000358278 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
TPM1-206ENST00000358278 ARL17AQ8IVW1 177 aa9.56□□□□□ -0.88
TPM1-206ENST00000358278 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
TPM1-206ENST00000358278 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
TPM1-206ENST00000358278 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
TPM1-206ENST00000358278 Q8NDZ9 215 aa9.56□□□□□ -0.88
TPM1-206ENST00000358278 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
TPM1-206ENST00000358278 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
TPM1-206ENST00000358278 EIF4EBP3O60516 100 aaPredicted RBP9.55□□□□□ -0.88
TPM1-206ENST00000358278 PRO1933Q9H354 126 aa9.55□□□□□ -0.88
TPM1-206ENST00000358278 NCR3O14931 201 aa9.54□□□□□ -0.88
TPM1-206ENST00000358278 IFITM1P13164 125 aa9.54□□□□□ -0.88
TPM1-206ENST00000358278 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
TPM1-206ENST00000358278 UBE2BP63146 152 aa9.53□□□□□ -0.88
TPM1-206ENST00000358278 HIST1H4GQ99525 98 aa9.53□□□□□ -0.88
TPM1-206ENST00000358278 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
TPM1-206ENST00000358278 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
TPM1-206ENST00000358278 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
TPM1-206ENST00000358278 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
TPM1-206ENST00000358278 MUSTN1Q8IVN3 82 aa9.53□□□□□ -0.88
TPM1-206ENST00000358278 NDUFC2O95298 119 aa9.52□□□□□ -0.89
TPM1-206ENST00000358278 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
TPM1-206ENST00000358278 VPS13BQ7Z7G8 4022 aa9.51□□□□□ -0.89
TPM1-206ENST00000358278 LINC00167Q96N53 147 aa9.51□□□□□ -0.89
TPM1-206ENST00000358278 PCP4L1A6NKN8 68 aa9.51□□□□□ -0.89
TPM1-206ENST00000358278 M0R378 163 aa9.51□□□□□ -0.89
TPM1-206ENST00000358278 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
TPM1-206ENST00000358278 FAT1Q14517 4588 aa9.5□□□□□ -0.89
TPM1-206ENST00000358278 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
TPM1-206ENST00000358278 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
TPM1-206ENST00000358278 IGKV2-28A0A075B6P5 120 aa9.49□□□□□ -0.89
TPM1-206ENST00000358278 IGKV2D-28P01615 120 aa9.49□□□□□ -0.89
TPM1-206ENST00000358278 TRBV10-2A0A0K0K1G8 114 aa9.48□□□□□ -0.89
TPM1-206ENST00000358278 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
TPM1-206ENST00000358278 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
TPM1-206ENST00000358278 TSTD3H0UI37 97 aa9.47□□□□□ -0.89
TPM1-206ENST00000358278 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
TPM1-206ENST00000358278 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
TPM1-206ENST00000358278 Q5VSD8 79 aa9.47□□□□□ -0.89
TPM1-206ENST00000358278 Q8N1X5 172 aa9.47□□□□□ -0.89
TPM1-206ENST00000358278 TAL2Q16559 108 aa9.46□□□□□ -0.89
TPM1-206ENST00000358278 KRTAP11-1Q8IUC1 163 aa9.46□□□□□ -0.89
TPM1-206ENST00000358278 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.89
TPM1-206ENST00000358278 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
TPM1-206ENST00000358278 PLA2G1BP04054 148 aaKnown RBP9.45□□□□□ -0.9
TPM1-206ENST00000358278 DDTP30046 118 aa9.45□□□□□ -0.9
TPM1-206ENST00000358278 TRBV10-3A0A0K0K1G6 114 aa9.45□□□□□ -0.9
TPM1-206ENST00000358278 A4D1N5 150 aa9.45□□□□□ -0.9
TPM1-206ENST00000358278 OR13C6PQ8NH95 151 aa9.45□□□□□ -0.9
TPM1-206ENST00000358278 HSD52Q0P140 79 aa9.44□□□□□ -0.9
TPM1-206ENST00000358278 C1orf137Q5JT78 98 aa9.44□□□□□ -0.9
TPM1-206ENST00000358278 CEND1Q8N111 149 aa9.43□□□□□ -0.9
TPM1-206ENST00000358278 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
TPM1-206ENST00000358278 IGLV6-57P01721 117 aa9.42□□□□□ -0.9
TPM1-206ENST00000358278 A6NDN8 102 aa9.41□□□□□ -0.9
TPM1-206ENST00000358278 REG3GQ6UW15 175 aa9.41□□□□□ -0.9
TPM1-206ENST00000358278 KRTAP17-1Q9BYP8 105 aa9.41□□□□□ -0.9
TPM1-206ENST00000358278 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
TPM1-206ENST00000358278 HERC2O95714 4834 aa9.41□□□□□ -0.9
TPM1-206ENST00000358278 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
TPM1-206ENST00000358278 PRYO14603 147 aa9.4□□□□□ -0.9
TPM1-206ENST00000358278 TRAV13-2A0A0B4J235 113 aa9.39□□□□□ -0.91
TPM1-206ENST00000358278 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
TPM1-206ENST00000358278 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
TPM1-206ENST00000358278 TRAV23DV6A0A075B6W5 121 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms