RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 GAGE2EQ4V326 116 aa9.49□□□□□ -0.89
CCNE1-202ENST00000357943 Q6ZSA8 131 aa9.49□□□□□ -0.89
CCNE1-202ENST00000357943 GAGE2DQ9UEU5 116 aa9.49□□□□□ -0.89
CCNE1-202ENST00000357943 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
CCNE1-202ENST00000357943 FAT1Q14517 4588 aa9.48□□□□□ -0.89
CCNE1-202ENST00000357943 C9orf118A6NHY6 69 aa9.48□□□□□ -0.89
CCNE1-202ENST00000357943 HERV-K104P63124 156 aa9.48□□□□□ -0.89
CCNE1-202ENST00000357943 GAGE10A6NGK3 116 aa9.47□□□□□ -0.89
CCNE1-202ENST00000357943 HAMPP81172 84 aa9.47□□□□□ -0.89
CCNE1-202ENST00000357943 OCIAD2Q56VL3 154 aa9.47□□□□□ -0.89
CCNE1-202ENST00000357943 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
CCNE1-202ENST00000357943 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
CCNE1-202ENST00000357943 A0A0U1RRA0 63 aa9.46□□□□□ -0.89
CCNE1-202ENST00000357943 CIRBPQ14011 172 aaKnown RBP9.46□□□□□ -0.89
CCNE1-202ENST00000357943 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.89
CCNE1-202ENST00000357943 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.89
CCNE1-202ENST00000357943 SMIM13P0DJ93 91 aa9.45□□□□□ -0.9
CCNE1-202ENST00000357943 COX17Q14061 63 aa9.45□□□□□ -0.9
CCNE1-202ENST00000357943 A0A0J9YXY3 114 aa9.45□□□□□ -0.9
CCNE1-202ENST00000357943 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
CCNE1-202ENST00000357943 LINC00158P58513 81 aa9.44□□□□□ -0.9
CCNE1-202ENST00000357943 TAL2Q16559 108 aa9.44□□□□□ -0.9
CCNE1-202ENST00000357943 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
CCNE1-202ENST00000357943 DPH3Q96FX2 82 aa9.44□□□□□ -0.9
CCNE1-202ENST00000357943 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
CCNE1-202ENST00000357943 XGP55808 180 aa9.43□□□□□ -0.9
CCNE1-202ENST00000357943 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
CCNE1-202ENST00000357943 CIRBP-AS1Q8TBR5 109 aa9.43□□□□□ -0.9
CCNE1-202ENST00000357943 SPANXB1Q9NS25 103 aaPredicted RBP9.43□□□□□ -0.9
CCNE1-202ENST00000357943 A0A087WYN8 130 aa9.42□□□□□ -0.9
CCNE1-202ENST00000357943 Q6ZVH6 145 aa9.42□□□□□ -0.9
CCNE1-202ENST00000357943 HIST1H4GQ99525 98 aa9.42□□□□□ -0.9
CCNE1-202ENST00000357943 VPS25Q9BRG1 176 aa9.42□□□□□ -0.9
CCNE1-202ENST00000357943 K7EP34 96 aa9.42□□□□□ -0.9
CCNE1-202ENST00000357943 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
CCNE1-202ENST00000357943 DAND5Q8N907 189 aa9.42□□□□□ -0.9
CCNE1-202ENST00000357943 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
CCNE1-202ENST00000357943 FAM168BA1KXE4 195 aa9.41□□□□□ -0.9
CCNE1-202ENST00000357943 CEND1Q8N111 149 aa9.41□□□□□ -0.9
CCNE1-202ENST00000357943 LITAFQ99732 161 aa9.41□□□□□ -0.9
CCNE1-202ENST00000357943 SND1-IT1Q9HBX3 110 aa9.41□□□□□ -0.9
CCNE1-202ENST00000357943 SRSF9Q13242 221 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCNE1-202ENST00000357943 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
CCNE1-202ENST00000357943 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
CCNE1-202ENST00000357943 TIMM17BO60830 172 aa9.39□□□□□ -0.91
CCNE1-202ENST00000357943 FABP2P12104 132 aa9.39□□□□□ -0.91
CCNE1-202ENST00000357943 PLAC8Q9NZF1 115 aa9.39□□□□□ -0.91
CCNE1-202ENST00000357943 VPS13BQ7Z7G8 4022 aa9.39□□□□□ -0.91
CCNE1-202ENST00000357943 CDK2AP2O75956 126 aa9.38□□□□□ -0.91
CCNE1-202ENST00000357943 FXYD2P54710 66 aa9.38□□□□□ -0.91
CCNE1-202ENST00000357943 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
CCNE1-202ENST00000357943 A0A1W2PPM0 123 aa9.38□□□□□ -0.91
CCNE1-202ENST00000357943 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
CCNE1-202ENST00000357943 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
CCNE1-202ENST00000357943 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
CCNE1-202ENST00000357943 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
CCNE1-202ENST00000357943 HERC2O95714 4834 aa9.36□□□□□ -0.91
CCNE1-202ENST00000357943 EPM2AB3EWF7 344 aa9.35□□□□□ -0.91
CCNE1-202ENST00000357943 H3BUT2 72 aa9.35□□□□□ -0.91
CCNE1-202ENST00000357943 NPC2P61916 151 aa9.35□□□□□ -0.91
CCNE1-202ENST00000357943 Q8NDZ9 215 aa9.35□□□□□ -0.91
CCNE1-202ENST00000357943 J3QR89 54 aa9.34□□□□□ -0.91
CCNE1-202ENST00000357943 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
CCNE1-202ENST00000357943 SPCS1Q9Y6A9 102 aa9.34□□□□□ -0.91
CCNE1-202ENST00000357943 SOSTDC1Q6X4U4 206 aa9.34□□□□□ -0.91
CCNE1-202ENST00000357943 MUSTN1Q8IVN3 82 aa9.34□□□□□ -0.91
CCNE1-202ENST00000357943 SMR3BP02814 79 aaPredicted RBP9.33□□□□□ -0.92
CCNE1-202ENST00000357943 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
CCNE1-202ENST00000357943 LOC107984156A0A0G2JMH3 177 aa9.32□□□□□ -0.92
CCNE1-202ENST00000357943 F8W1H4 67 aa9.32□□□□□ -0.92
CCNE1-202ENST00000357943 C21orf62-AS1Q17RA5 79 aa9.32□□□□□ -0.92
CCNE1-202ENST00000357943 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
CCNE1-202ENST00000357943 ARL17AQ8IVW1 177 aa9.32□□□□□ -0.92
CCNE1-202ENST00000357943 TMEM238LA0A1B0GVL6 79 aa9.31□□□□□ -0.92
CCNE1-202ENST00000357943 A6NJY4 79 aa9.31□□□□□ -0.92
CCNE1-202ENST00000357943 M0QXV9 152 aa9.31□□□□□ -0.92
CCNE1-202ENST00000357943 VPREB1P12018 145 aa9.31□□□□□ -0.92
CCNE1-202ENST00000357943 IFITM1P13164 125 aa9.31□□□□□ -0.92
CCNE1-202ENST00000357943 LINC00308Q8TCZ7 52 aa9.31□□□□□ -0.92
CCNE1-202ENST00000357943 NHP2Q9NX24 153 aaKnown RBP9.31□□□□□ -0.92
CCNE1-202ENST00000357943 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
CCNE1-202ENST00000357943 A0A1B0GWB2 263 aa9.3□□□□□ -0.92
CCNE1-202ENST00000357943 SCGB1A1P11684 91 aa9.3□□□□□ -0.92
CCNE1-202ENST00000357943 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
CCNE1-202ENST00000357943 RPL24P83731 157 aaKnown RBP9.3□□□□□ -0.92
CCNE1-202ENST00000357943 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
CCNE1-202ENST00000357943 A4D1N5 150 aa9.29□□□□□ -0.92
CCNE1-202ENST00000357943 K7ERJ3 54 aa9.28□□□□□ -0.92
CCNE1-202ENST00000357943 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
CCNE1-202ENST00000357943 KRTAP17-1Q9BYP8 105 aa9.28□□□□□ -0.92
CCNE1-202ENST00000357943 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.92
CCNE1-202ENST00000357943 PPDPFQ9H3Y8 114 aa9.27□□□□□ -0.92
CCNE1-202ENST00000357943 CFC1BP0CG36 223 aa9.27□□□□□ -0.93
CCNE1-202ENST00000357943 CFC1P0CG37 223 aa9.27□□□□□ -0.93
CCNE1-202ENST00000357943 LINC00528Q8N1L1 170 aa9.27□□□□□ -0.93
CCNE1-202ENST00000357943 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
CCNE1-202ENST00000357943 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
CCNE1-202ENST00000357943 NCR3O14931 201 aa9.26□□□□□ -0.93
CCNE1-202ENST00000357943 KRTAP11-1Q8IUC1 163 aa9.26□□□□□ -0.93
CCNE1-202ENST00000357943 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms