RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DPH3Q96FX2 82 aa16.06■□□□□ 0.16
SSBP3-202ENST00000357475 PRO1933Q9H354 126 aa16.06■□□□□ 0.16
SSBP3-202ENST00000357475 SERTAD4-AS1Q5TG53 156 aa16.05■□□□□ 0.16
SSBP3-202ENST00000357475 LINC00474Q9P2X8 69 aa16.05■□□□□ 0.16
SSBP3-202ENST00000357475 C2orf91Q6ZV80 131 aa16.04■□□□□ 0.16
SSBP3-202ENST00000357475 SCXQ7RTU7 201 aa16.04■□□□□ 0.16
SSBP3-202ENST00000357475 CIRBP-AS1Q8TBR5 109 aa16.04■□□□□ 0.16
SSBP3-202ENST00000357475 LINC00518Q8N0U6 118 aa16.04■□□□□ 0.16
SSBP3-202ENST00000357475 XGP55808 180 aa16.03■□□□□ 0.16
SSBP3-202ENST00000357475 FAM19A5Q7Z5A7 132 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-202ENST00000357475 BIRC6Q9NR09 4857 aa16.02■□□□□ 0.16
SSBP3-202ENST00000357475 TMEM238C9JI98 176 aa16.02■□□□□ 0.15
SSBP3-202ENST00000357475 KIAA1109Q2LD37 5005 aa16.01■□□□□ 0.15
SSBP3-202ENST00000357475 SPANXDQ9BXN6 97 aa16.01■□□□□ 0.15
SSBP3-202ENST00000357475 SPANXCQ9NY87 97 aa16.01■□□□□ 0.15
SSBP3-202ENST00000357475 LINC00308Q8TCZ7 52 aa16■□□□□ 0.15
SSBP3-202ENST00000357475 RYR1P21817 5038 aa16■□□□□ 0.15
SSBP3-202ENST00000357475 PLAC8Q9NZF1 115 aa15.99■□□□□ 0.15
SSBP3-202ENST00000357475 HSPG2P98160 4391 aa15.98■□□□□ 0.15
SSBP3-202ENST00000357475 LOC107984156A0A0G2JMH3 177 aa15.97■□□□□ 0.15
SSBP3-202ENST00000357475 ARL17AQ8IVW1 177 aa15.97■□□□□ 0.15
SSBP3-202ENST00000357475 SPANXB1Q9NS25 103 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-202ENST00000357475 UQCR10Q9UDW1 63 aa15.97■□□□□ 0.15
SSBP3-202ENST00000357475 EPM2AB3EWF7 344 aa15.96■□□□□ 0.15
SSBP3-202ENST00000357475 VPREB1P12018 145 aa15.96■□□□□ 0.15
SSBP3-202ENST00000357475 PRR3P79522 188 aaKnown RBP15.96■□□□□ 0.15
SSBP3-202ENST00000357475 HIGD1BQ9P298 99 aa15.95■□□□□ 0.14
SSBP3-202ENST00000357475 SRSF9Q13242 221 aaKnown RBP eCLIP15.94■□□□□ 0.14
SSBP3-202ENST00000357475 MUSTN1Q8IVN3 82 aa15.94■□□□□ 0.14
SSBP3-202ENST00000357475 PLA2G2DQ9UNK4 145 aa15.94■□□□□ 0.14
SSBP3-202ENST00000357475 PHF5AQ7RTV0 110 aaKnown RBP15.94■□□□□ 0.14
SSBP3-202ENST00000357475 MIEN1Q9BRT3 115 aa15.94■□□□□ 0.14
SSBP3-202ENST00000357475 M0QXV9 152 aa15.92■□□□□ 0.14
SSBP3-202ENST00000357475 C22orf24Q9Y442 160 aa15.92■□□□□ 0.14
SSBP3-202ENST00000357475 Q6ZVH6 145 aa15.91■□□□□ 0.14
SSBP3-202ENST00000357475 HIST1H4GQ99525 98 aa15.91■□□□□ 0.14
SSBP3-202ENST00000357475 NCR3O14931 201 aa15.9■□□□□ 0.14
SSBP3-202ENST00000357475 FAT1Q14517 4588 aa15.9■□□□□ 0.14
SSBP3-202ENST00000357475 IGLV5-37A0A075B6J1 123 aa15.89■□□□□ 0.13
SSBP3-202ENST00000357475 CDK2AP2O75956 126 aa15.89■□□□□ 0.13
SSBP3-202ENST00000357475 IFITM1P13164 125 aa15.89■□□□□ 0.13
SSBP3-202ENST00000357475 RPL24P83731 157 aaKnown RBP15.88■□□□□ 0.13
SSBP3-202ENST00000357475 GAGE10A6NGK3 116 aa15.87■□□□□ 0.13
SSBP3-202ENST00000357475 KRTAP11-1Q8IUC1 163 aa15.87■□□□□ 0.13
SSBP3-202ENST00000357475 NKAPP1Q8N9T2 125 aa15.87■□□□□ 0.13
SSBP3-202ENST00000357475 SMR3BP02814 79 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-202ENST00000357475 C7orf33Q8WU49 177 aa15.86■□□□□ 0.13
SSBP3-202ENST00000357475 HNRNPA3P51991 378 aaKnown RBP15.85■□□□□ 0.13
SSBP3-202ENST00000357475 MRPL55Q7Z7F7 128 aaKnown RBP15.85■□□□□ 0.13
SSBP3-202ENST00000357475 IGKV2-28A0A075B6P5 120 aa15.84■□□□□ 0.13
SSBP3-202ENST00000357475 IGKV2D-28P01615 120 aa15.84■□□□□ 0.13
SSBP3-202ENST00000357475 NDUFC2O95298 119 aa15.84■□□□□ 0.13
SSBP3-202ENST00000357475 LINC00167Q96N53 147 aa15.84■□□□□ 0.13
SSBP3-202ENST00000357475 TSTD3H0UI37 97 aa15.83■□□□□ 0.12
SSBP3-202ENST00000357475 KRTAP17-1Q9BYP8 105 aa15.83■□□□□ 0.12
SSBP3-202ENST00000357475 PPDPFQ9H3Y8 114 aa15.83■□□□□ 0.12
SSBP3-202ENST00000357475 RPL37AP8A6NKH3 93 aa15.82■□□□□ 0.12
SSBP3-202ENST00000357475 A4D1N5 150 aa15.81■□□□□ 0.12
SSBP3-202ENST00000357475 COPS9Q8WXC6 57 aa15.8■□□□□ 0.12
SSBP3-202ENST00000357475 M0R378 163 aa15.79■□□□□ 0.12
SSBP3-202ENST00000357475 TAL2Q16559 108 aa15.79■□□□□ 0.12
SSBP3-202ENST00000357475 CEND1Q8N111 149 aa15.79■□□□□ 0.12
SSBP3-202ENST00000357475 HSD52Q0P140 79 aa15.78■□□□□ 0.12
SSBP3-202ENST00000357475 LINC00337Q8N6G1 96 aa15.78■□□□□ 0.12
SSBP3-202ENST00000357475 FXYD2P54710 66 aa15.77■□□□□ 0.11
SSBP3-202ENST00000357475 LBHQ53QV2 105 aaPredicted RBP15.77■□□□□ 0.11
SSBP3-202ENST00000357475 VPS13BQ7Z7G8 4022 aa15.76■□□□□ 0.11
SSBP3-202ENST00000357475 TRBV10-2A0A0K0K1G8 114 aa15.76■□□□□ 0.11
SSBP3-202ENST00000357475 UBE2BP63146 152 aa15.76■□□□□ 0.11
SSBP3-202ENST00000357475 CTAG1AP78358 180 aa15.76■□□□□ 0.11
SSBP3-202ENST00000357475 LINC00528Q8N1L1 170 aa15.76■□□□□ 0.11
SSBP3-202ENST00000357475 TRBV10-3A0A0K0K1G6 114 aa15.75■□□□□ 0.11
SSBP3-202ENST00000357475 IGLV1-50A0A075B6I6 118 aa15.74■□□□□ 0.11
SSBP3-202ENST00000357475 IGLV6-57P01721 117 aa15.71■□□□□ 0.11
SSBP3-202ENST00000357475 DDTP30046 118 aa15.71■□□□□ 0.11
SSBP3-202ENST00000357475 PSORS1C2Q9UIG4 136 aa15.71■□□□□ 0.11
SSBP3-202ENST00000357475 OR13C6PQ8NH95 151 aa15.7■□□□□ 0.1
SSBP3-202ENST00000357475 S100A7L2Q5SY68 101 aa15.69■□□□□ 0.1
SSBP3-202ENST00000357475 HERC2O95714 4834 aa15.69■□□□□ 0.1
SSBP3-202ENST00000357475 CFC1BP0CG36 223 aa15.68■□□□□ 0.1
SSBP3-202ENST00000357475 CFC1P0CG37 223 aa15.68■□□□□ 0.1
SSBP3-202ENST00000357475 A6NDN8 102 aa15.67■□□□□ 0.1
SSBP3-202ENST00000357475 HINT1P49773 126 aaPredicted RBP15.66■□□□□ 0.1
SSBP3-202ENST00000357475 BVES-AS1Q5T3Y7 98 aa15.66■□□□□ 0.1
SSBP3-202ENST00000357475 RPL37AP61513 92 aaKnown RBP15.64■□□□□ 0.09
SSBP3-202ENST00000357475 KRTAP10-4P60372 401 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-202ENST00000357475 KCNQ1DNQ9H478 68 aa15.63■□□□□ 0.09
SSBP3-202ENST00000357475 C1orf137Q5JT78 98 aa15.63■□□□□ 0.09
SSBP3-202ENST00000357475 TMEM126AQ9H061 195 aa15.63■□□□□ 0.09
SSBP3-202ENST00000357475 NHP2Q9NX24 153 aaKnown RBP15.63■□□□□ 0.09
SSBP3-202ENST00000357475 TRAV13-2A0A0B4J235 113 aa15.62■□□□□ 0.09
SSBP3-202ENST00000357475 K7ERJ3 54 aa15.62■□□□□ 0.09
SSBP3-202ENST00000357475 TRAV23DV6A0A075B6W5 121 aa15.61■□□□□ 0.09
SSBP3-202ENST00000357475 TMEM238LA0A1B0GVL6 79 aa15.61■□□□□ 0.09
SSBP3-202ENST00000357475 A6NJY4 79 aa15.61■□□□□ 0.09
SSBP3-202ENST00000357475 Q5VSD8 79 aa15.61■□□□□ 0.09
SSBP3-202ENST00000357475 REG3GQ6UW15 175 aa15.61■□□□□ 0.09
SSBP3-202ENST00000357475 A0A0B4J2C4 111 aa15.6■□□□□ 0.09
SSBP3-202ENST00000357475 RPL13AP40429 203 aaKnown RBP15.6■□□□□ 0.09
SSBP3-202ENST00000357475 Q8N1X5 172 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms