RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 A0A087WVE0 104 aa3.87□□□□□ -1.79
PTPRD-202ENST00000356435 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
PTPRD-202ENST00000356435 ZNF462Q96JM2 2506 aa3.87□□□□□ -1.79
PTPRD-202ENST00000356435 TET2Q6N021 2002 aaPredicted RBP3.87□□□□□ -1.79
PTPRD-202ENST00000356435 A0A1B0GU69 56 aa3.86□□□□□ -1.79
PTPRD-202ENST00000356435 SOSTDC1Q6X4U4 206 aa3.86□□□□□ -1.79
PTPRD-202ENST00000356435 TYMSOSQ8TAI1 123 aa3.86□□□□□ -1.79
PTPRD-202ENST00000356435 Q6ZSN1 163 aa3.86□□□□□ -1.79
PTPRD-202ENST00000356435 ACYP2P14621 99 aa3.86□□□□□ -1.79
PTPRD-202ENST00000356435 PSPHP1O15172 72 aa3.86□□□□□ -1.79
PTPRD-202ENST00000356435 C6orf48Q9UBA6 75 aa3.86□□□□□ -1.79
PTPRD-202ENST00000356435 RPL37AP61513 92 aaKnown RBP3.85□□□□□ -1.79
PTPRD-202ENST00000356435 LINC00315P59091 139 aa3.85□□□□□ -1.79
PTPRD-202ENST00000356435 C2CD3Q4AC94 2353 aa3.85□□□□□ -1.79
PTPRD-202ENST00000356435 LINC00167Q96N53 147 aa3.84□□□□□ -1.79
PTPRD-202ENST00000356435 A0A1W2PPR1 153 aa3.84□□□□□ -1.79
PTPRD-202ENST00000356435 FN1P02751 2386 aaKnown RBP3.84□□□□□ -1.79
PTPRD-202ENST00000356435 SMIM29Q86T20 159 aa3.84□□□□□ -1.8
PTPRD-202ENST00000356435 LINC00313P59037 77 aa3.84□□□□□ -1.8
PTPRD-202ENST00000356435 C11orf72Q8NBR9 251 aa3.84□□□□□ -1.8
PTPRD-202ENST00000356435 KIAA0087Q14695 138 aa3.84□□□□□ -1.8
PTPRD-202ENST00000356435 MTORP42345 2549 aa3.84□□□□□ -1.8
PTPRD-202ENST00000356435 FAM19A4Q96LR4 140 aa3.83□□□□□ -1.8
PTPRD-202ENST00000356435 EPM2AB3EWF7 344 aa3.83□□□□□ -1.8
PTPRD-202ENST00000356435 KRTAP24-1Q3LI83 254 aa3.83□□□□□ -1.8
PTPRD-202ENST00000356435 Q6ZRX8 168 aa3.83□□□□□ -1.8
PTPRD-202ENST00000356435 ABCA12Q86UK0 2595 aa3.83□□□□□ -1.8
PTPRD-202ENST00000356435 TRAV22A0A0B4J277 110 aa3.83□□□□□ -1.8
PTPRD-202ENST00000356435 A8MTW9 85 aa3.83□□□□□ -1.8
PTPRD-202ENST00000356435 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
PTPRD-202ENST00000356435 IGLV5-39A0A0G2JS06 123 aa3.82□□□□□ -1.8
PTPRD-202ENST00000356435 ELOF1P60002 83 aaKnown RBP3.82□□□□□ -1.8
PTPRD-202ENST00000356435 H3BPC8 53 aa3.82□□□□□ -1.8
PTPRD-202ENST00000356435 Q96NJ1 140 aa3.82□□□□□ -1.8
PTPRD-202ENST00000356435 LITAFQ99732 161 aa3.82□□□□□ -1.8
PTPRD-202ENST00000356435 TLN1Q9Y490 2541 aaKnown RBP3.81□□□□□ -1.8
PTPRD-202ENST00000356435 PHF5AQ7RTV0 110 aaKnown RBP3.81□□□□□ -1.8
PTPRD-202ENST00000356435 ZNF575Q86XF7 245 aa3.81□□□□□ -1.8
PTPRD-202ENST00000356435 TLN2Q9Y4G6 2542 aa3.81□□□□□ -1.8
PTPRD-202ENST00000356435 GVQW2A0A096LPI5 108 aaPredicted RBP3.81□□□□□ -1.8
PTPRD-202ENST00000356435 C8orf87E5RJ46 101 aa3.81□□□□□ -1.8
PTPRD-202ENST00000356435 CHTF8P0CG12 524 aa3.81□□□□□ -1.8
PTPRD-202ENST00000356435 SPATA3Q8NHX4 192 aa3.8□□□□□ -1.8
PTPRD-202ENST00000356435 SPAG11AQ6PDA7 123 aa3.8□□□□□ -1.8
PTPRD-202ENST00000356435 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
PTPRD-202ENST00000356435 LINC00588Q9Y4M8 146 aa3.8□□□□□ -1.8
PTPRD-202ENST00000356435 F8P00451 2351 aa3.79□□□□□ -1.8
PTPRD-202ENST00000356435 EP400Q96L91 3159 aa3.79□□□□□ -1.8
PTPRD-202ENST00000356435 LINC00846Q9NV44 126 aa3.79□□□□□ -1.8
PTPRD-202ENST00000356435 PCSK5Q92824 1860 aa3.79□□□□□ -1.8
PTPRD-202ENST00000356435 Q9UF83 564 aa3.79□□□□□ -1.8
PTPRD-202ENST00000356435 LINC00476Q8WZB0 136 aa3.79□□□□□ -1.8
PTPRD-202ENST00000356435 IGHV3OR16-9A0A0B4J2B5 98 aa3.78□□□□□ -1.8
PTPRD-202ENST00000356435 LINC00304Q8N9R0 145 aa3.78□□□□□ -1.8
PTPRD-202ENST00000356435 ST20-AS1Q8NBB2 130 aa3.78□□□□□ -1.8
PTPRD-202ENST00000356435 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
PTPRD-202ENST00000356435 FASNP49327 2511 aaKnown RBP3.77□□□□□ -1.81
PTPRD-202ENST00000356435 PIEZO2Q9H5I5 2752 aa3.77□□□□□ -1.81
PTPRD-202ENST00000356435 VPREB1P12018 145 aa3.77□□□□□ -1.81
PTPRD-202ENST00000356435 Q8NAQ8 132 aa3.77□□□□□ -1.81
PTPRD-202ENST00000356435 EIF4EBP3O60516 100 aaPredicted RBP3.76□□□□□ -1.81
PTPRD-202ENST00000356435 USP9XQ93008 2570 aaPredicted RBP3.76□□□□□ -1.81
PTPRD-202ENST00000356435 DNAH10OSP0CZ25 163 aa3.76□□□□□ -1.81
PTPRD-202ENST00000356435 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
PTPRD-202ENST00000356435 SERTAD4-AS1Q5TG53 156 aa3.75□□□□□ -1.81
PTPRD-202ENST00000356435 A8MWP4 228 aa3.75□□□□□ -1.81
PTPRD-202ENST00000356435 LINC00336Q6ZUF6 198 aa3.75□□□□□ -1.81
PTPRD-202ENST00000356435 Q6ZQT0 140 aa3.74□□□□□ -1.81
PTPRD-202ENST00000356435 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
PTPRD-202ENST00000356435 OBSCN-AS1Q96MR7 158 aa3.74□□□□□ -1.81
PTPRD-202ENST00000356435 PKD1L2Q7Z442 2459 aa3.74□□□□□ -1.81
PTPRD-202ENST00000356435 RBM12B-AS1Q9P1G2 102 aa3.73□□□□□ -1.81
PTPRD-202ENST00000356435 APLNQ9ULZ1 77 aa3.73□□□□□ -1.81
PTPRD-202ENST00000356435 IGLV8-61A0A075B6I0 122 aa3.73□□□□□ -1.81
PTPRD-202ENST00000356435 MRPL34Q9BQ48 92 aaKnown RBP3.73□□□□□ -1.81
PTPRD-202ENST00000356435 CRIPTQ9P021 101 aa3.72□□□□□ -1.81
PTPRD-202ENST00000356435 SSBP3-AS1Q7Z2R9 100 aa3.72□□□□□ -1.81
PTPRD-202ENST00000356435 C9orf92A6NGG3 77 aa3.72□□□□□ -1.81
PTPRD-202ENST00000356435 ERC2-IT1O76042 136 aa3.72□□□□□ -1.81
PTPRD-202ENST00000356435 CEP295Q9C0D2 2601 aa3.72□□□□□ -1.81
PTPRD-202ENST00000356435 KLKP1Q107X0 134 aa3.71□□□□□ -1.82
PTPRD-202ENST00000356435 C4orf26Q17RF5 130 aa3.71□□□□□ -1.82
PTPRD-202ENST00000356435 FAM168BA1KXE4 195 aa3.71□□□□□ -1.82
PTPRD-202ENST00000356435 DSCR10P59022 87 aa3.71□□□□□ -1.82
PTPRD-202ENST00000356435 CD164Q04900 197 aa3.71□□□□□ -1.82
PTPRD-202ENST00000356435 IGLV1-50A0A075B6I6 118 aa3.7□□□□□ -1.82
PTPRD-202ENST00000356435 FAM218AQ96MZ4 157 aa3.7□□□□□ -1.82
PTPRD-202ENST00000356435 ANKRD11Q6UB99 2663 aaPredicted RBP3.7□□□□□ -1.82
PTPRD-202ENST00000356435 IGLV5-37A0A075B6J1 123 aa3.7□□□□□ -1.82
PTPRD-202ENST00000356435 K7EIL1 84 aa3.7□□□□□ -1.82
PTPRD-202ENST00000356435 IGLV6-57P01721 117 aa3.7□□□□□ -1.82
PTPRD-202ENST00000356435 USP9YO00507 2555 aaPredicted RBP3.7□□□□□ -1.82
PTPRD-202ENST00000356435 KRTAP10-11P60412 298 aa3.69□□□□□ -1.82
PTPRD-202ENST00000356435 SETD2Q9BYW2 2564 aaPredicted RBP3.69□□□□□ -1.82
PTPRD-202ENST00000356435 ZNF861PO60384 105 aa3.69□□□□□ -1.82
PTPRD-202ENST00000356435 TM2D3Q9BRN9 247 aa3.69□□□□□ -1.82
PTPRD-202ENST00000356435 KCNQ1DNQ9H478 68 aa3.69□□□□□ -1.82
PTPRD-202ENST00000356435 A0A087WTM6 91 aa3.68□□□□□ -1.82
PTPRD-202ENST00000356435 COA5Q86WW8 74 aa3.68□□□□□ -1.82
PTPRD-202ENST00000356435 MUC4Q99102 2169 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms