RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CASC10Q5T4H9 136 aa16.95■□□□□ 0.3
CLK2-201ENST00000355560 K7ERU9 68 aa16.94■□□□□ 0.3
CLK2-201ENST00000355560 XAGE1AQ9HD64 81 aa16.93■□□□□ 0.3
CLK2-201ENST00000355560 DYNC2H1Q8NCM8 4307 aaKnown RBP16.92■□□□□ 0.3
CLK2-201ENST00000355560 F8WDY8 70 aa16.92■□□□□ 0.3
CLK2-201ENST00000355560 NCR3O14931 201 aa16.92■□□□□ 0.3
CLK2-201ENST00000355560 KRTAP1-5Q9BYS1 174 aa16.92■□□□□ 0.3
CLK2-201ENST00000355560 USP17L23D6RBM5 183 aa16.91■□□□□ 0.3
CLK2-201ENST00000355560 SYCNQ0VAF6 134 aa16.91■□□□□ 0.3
CLK2-201ENST00000355560 KRTAP21-3Q3LHN1 58 aa16.9■□□□□ 0.3
CLK2-201ENST00000355560 TRBV10-2A0A0K0K1G8 114 aa16.89■□□□□ 0.29
CLK2-201ENST00000355560 NDUFC2-KCTD14E9PQ53 114 aa16.88■□□□□ 0.29
CLK2-201ENST00000355560 ANKRD29Q8N6D5 301 aa16.88■□□□□ 0.29
CLK2-201ENST00000355560 TMEM126AQ9H061 195 aa16.88■□□□□ 0.29
CLK2-201ENST00000355560 FAM218AQ96MZ4 157 aa16.87■□□□□ 0.29
CLK2-201ENST00000355560 TEN1Q86WV5 123 aa16.86■□□□□ 0.29
CLK2-201ENST00000355560 M0QXV9 152 aa16.85■□□□□ 0.29
CLK2-201ENST00000355560 LECT2O14960 151 aa16.85■□□□□ 0.29
CLK2-201ENST00000355560 CARD19Q96LW7 228 aa16.85■□□□□ 0.29
CLK2-201ENST00000355560 S100A7L2Q5SY68 101 aa16.84■□□□□ 0.29
CLK2-201ENST00000355560 RPL18AQ02543 176 aaKnown RBP16.83■□□□□ 0.28
CLK2-201ENST00000355560 RNF151Q2KHN1 245 aa16.83■□□□□ 0.28
CLK2-201ENST00000355560 GAGE2EQ4V326 116 aa16.83■□□□□ 0.28
CLK2-201ENST00000355560 GAGE2DQ9UEU5 116 aa16.83■□□□□ 0.28
CLK2-201ENST00000355560 PLECQ15149 4684 aaKnown RBP16.83■□□□□ 0.28
CLK2-201ENST00000355560 TENM2Q9NT68 2774 aa16.82■□□□□ 0.28
CLK2-201ENST00000355560 Q6ZRP5 223 aa16.82■□□□□ 0.28
CLK2-201ENST00000355560 TRACP01848 142 aa16.82■□□□□ 0.28
CLK2-201ENST00000355560 SLPIP03973 132 aa16.82■□□□□ 0.28
CLK2-201ENST00000355560 H0YGX0 51 aa16.81■□□□□ 0.28
CLK2-201ENST00000355560 H3BT86 120 aa16.81■□□□□ 0.28
CLK2-201ENST00000355560 LINC01600Q96MT4 127 aa16.81■□□□□ 0.28
CLK2-201ENST00000355560 DNAH7Q8WXX0 4024 aa16.78■□□□□ 0.28
CLK2-201ENST00000355560 A0A087WYN8 130 aa16.78■□□□□ 0.28
CLK2-201ENST00000355560 STARD9Q9P2P6 4700 aa16.77■□□□□ 0.28
CLK2-201ENST00000355560 J3QR89 54 aa16.77■□□□□ 0.28
CLK2-201ENST00000355560 PPDPFLQ8WWR9 84 aa16.76■□□□□ 0.27
CLK2-201ENST00000355560 PSCAO43653 123 aa16.76■□□□□ 0.27
CLK2-201ENST00000355560 IGLV6-57P01721 117 aa16.76■□□□□ 0.27
CLK2-201ENST00000355560 VPREB1P12018 145 aa16.76■□□□□ 0.27
CLK2-201ENST00000355560 TLX1NBP0CAT3 122 aa16.73■□□□□ 0.27
CLK2-201ENST00000355560 C6orf99Q4VX62 202 aa16.73■□□□□ 0.27
CLK2-201ENST00000355560 C9orf129Q5T035 196 aaKnown RBP16.73■□□□□ 0.27
CLK2-201ENST00000355560 TRBV10-3A0A0K0K1G6 114 aa16.72■□□□□ 0.27
CLK2-201ENST00000355560 TTC32Q5I0X7 151 aa16.72■□□□□ 0.27
CLK2-201ENST00000355560 NBDYA0A0U1RRE5 68 aa16.72■□□□□ 0.27
CLK2-201ENST00000355560 DNAL4O96015 105 aa16.72■□□□□ 0.27
CLK2-201ENST00000355560 VPS25Q9BRG1 176 aa16.72■□□□□ 0.27
CLK2-201ENST00000355560 DNAH10Q8IVF4 4471 aa16.71■□□□□ 0.27
CLK2-201ENST00000355560 TEX49A0A1B0GTD5 131 aa16.69■□□□□ 0.26
CLK2-201ENST00000355560 BAALC-AS2P0C853 105 aa16.67■□□□□ 0.26
CLK2-201ENST00000355560 FBN3Q75N90 2809 aa16.67■□□□□ 0.26
CLK2-201ENST00000355560 M0R378 163 aa16.67■□□□□ 0.26
CLK2-201ENST00000355560 TRAV23DV6A0A075B6W5 121 aa16.66■□□□□ 0.26
CLK2-201ENST00000355560 SERTAD4-AS1Q5TG53 156 aa16.63■□□□□ 0.25
CLK2-201ENST00000355560 GAGE2BQ13066 116 aa16.62■□□□□ 0.25
CLK2-201ENST00000355560 A0A1B0GX51 115 aa16.61■□□□□ 0.25
CLK2-201ENST00000355560 Q8N814 137 aa16.61■□□□□ 0.25
CLK2-201ENST00000355560 LOC107984640A0A0U1RRK4 108 aa16.6■□□□□ 0.25
CLK2-201ENST00000355560 NKAPP1Q8N9T2 125 aa16.6■□□□□ 0.25
CLK2-201ENST00000355560 DIRC1Q969H9 104 aa16.6■□□□□ 0.25
CLK2-201ENST00000355560 ZNF73O43830 326 aaPredicted RBP16.6■□□□□ 0.25
CLK2-201ENST00000355560 CNBPP62633 177 aaKnown RBP16.59■□□□□ 0.25
CLK2-201ENST00000355560 C22orf24Q9Y442 160 aa16.59■□□□□ 0.25
CLK2-201ENST00000355560 C14orf177Q52M58 125 aa16.58■□□□□ 0.25
CLK2-201ENST00000355560 PLA2G2DQ9UNK4 145 aa16.58■□□□□ 0.24
CLK2-201ENST00000355560 M0R2N4 97 aa16.57■□□□□ 0.24
CLK2-201ENST00000355560 LINC00575Q6W349 94 aa16.57■□□□□ 0.24
CLK2-201ENST00000355560 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.57■□□□□ 0.24
CLK2-201ENST00000355560 FAM168BA1KXE4 195 aa16.57■□□□□ 0.24
CLK2-201ENST00000355560 VPS13DQ5THJ4 4388 aa16.57■□□□□ 0.24
CLK2-201ENST00000355560 Q6ZRN7 208 aaPredicted RBP16.56■□□□□ 0.24
CLK2-201ENST00000355560 LINC00167Q96N53 147 aa16.56■□□□□ 0.24
CLK2-201ENST00000355560 ORMDL1Q9P0S3 153 aa16.56■□□□□ 0.24
CLK2-201ENST00000355560 SNCGO76070 127 aa16.55■□□□□ 0.24
CLK2-201ENST00000355560 LRCOL1A6NCL2 159 aa16.54■□□□□ 0.24
CLK2-201ENST00000355560 C7orf33Q8WU49 177 aa16.54■□□□□ 0.24
CLK2-201ENST00000355560 CBY1Q9Y3M2 126 aa16.53■□□□□ 0.24
CLK2-201ENST00000355560 hADV29S1A0JD25 119 aa16.51■□□□□ 0.23
CLK2-201ENST00000355560 IGLV5-37A0A075B6J1 123 aa16.5■□□□□ 0.23
CLK2-201ENST00000355560 KRTAP7-1Q8IUC3 87 aa16.5■□□□□ 0.23
CLK2-201ENST00000355560 COX7BP24311 80 aa16.49■□□□□ 0.23
CLK2-201ENST00000355560 ELOF1P60002 83 aaKnown RBP16.49■□□□□ 0.23
CLK2-201ENST00000355560 FAM19A5Q7Z5A7 132 aaPredicted RBP16.49■□□□□ 0.23
CLK2-201ENST00000355560 TRBV7-6A0A0J9YX20 115 aa16.48■□□□□ 0.23
CLK2-201ENST00000355560 A0A096LNI7 61 aa16.48■□□□□ 0.23
CLK2-201ENST00000355560 KCNQ1DNQ9H478 68 aa16.47■□□□□ 0.23
CLK2-201ENST00000355560 C16orf90A8MZG2 172 aa16.46■□□□□ 0.23
CLK2-201ENST00000355560 TGP01266 2768 aa16.46■□□□□ 0.23
CLK2-201ENST00000355560 IGKV2-24A0A0C4DH68 120 aa16.45■□□□□ 0.22
CLK2-201ENST00000355560 CDIP1Q9H305 208 aa16.45■□□□□ 0.22
CLK2-201ENST00000355560 RPL37AP8A6NKH3 93 aa16.44■□□□□ 0.22
CLK2-201ENST00000355560 TMEM256-PLSCR3K7ERE1 68 aa16.43■□□□□ 0.22
CLK2-201ENST00000355560 Q6ZR54 194 aa16.43■□□□□ 0.22
CLK2-201ENST00000355560 MRPL55Q7Z7F7 128 aaKnown RBP16.43■□□□□ 0.22
CLK2-201ENST00000355560 INAFM2P0DMQ5 153 aa16.42■□□□□ 0.22
CLK2-201ENST00000355560 Q6ZQY7 126 aa16.42■□□□□ 0.22
CLK2-201ENST00000355560 WWC2-AS2Q96NR7 200 aa16.42■□□□□ 0.22
CLK2-201ENST00000355560 IGLV1-50A0A075B6I6 118 aa16.41■□□□□ 0.22
CLK2-201ENST00000355560 LINC00528Q8N1L1 170 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms