RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 FLNCQ14315 2725 aa6.68□□□□□ -1.34
GABPA-201ENST00000354828 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
GABPA-201ENST00000354828 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
GABPA-201ENST00000354828 URB1-AS1Q96HZ7 61 aa6.67□□□□□ -1.34
GABPA-201ENST00000354828 Q9UF83 564 aa6.67□□□□□ -1.34
GABPA-201ENST00000354828 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
GABPA-201ENST00000354828 PLA2G1BP04054 148 aaKnown RBP6.66□□□□□ -1.34
GABPA-201ENST00000354828 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
GABPA-201ENST00000354828 TM2D3Q9BRN9 247 aa6.66□□□□□ -1.34
GABPA-201ENST00000354828 IGHV3OR16-9A0A0B4J2B5 98 aa6.65□□□□□ -1.34
GABPA-201ENST00000354828 SEC61GP60059 68 aa6.65□□□□□ -1.35
GABPA-201ENST00000354828 SMCR5Q8TEV8 140 aa6.65□□□□□ -1.35
GABPA-201ENST00000354828 Q6JHZ5 121 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 FAM236AA0A1B0GUQ0 79 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 FAM236BA0A1B0GV22 79 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 CSNK1G2-AS1Q8NCQ2 148 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 GCN1Q92616 2671 aaKnown RBP6.64□□□□□ -1.35
GABPA-201ENST00000354828 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 DMXL2Q8TDJ6 3036 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 NDUFC2O95298 119 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
GABPA-201ENST00000354828 ATOX1O00244 68 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 Q6ZRP5 223 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 C6orf48Q9UBA6 75 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 EYSQ5T1H1 3165 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 LINC00167Q96N53 147 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 ENHOQ6UWT2 76 aa6.63□□□□□ -1.35
GABPA-201ENST00000354828 PHF5AQ7RTV0 110 aaKnown RBP6.63□□□□□ -1.35
GABPA-201ENST00000354828 TEX15Q9BXT5 2789 aa6.62□□□□□ -1.35
GABPA-201ENST00000354828 SMIM20Q8N5G0 67 aa6.62□□□□□ -1.35
GABPA-201ENST00000354828 Q8N814 137 aa6.62□□□□□ -1.35
GABPA-201ENST00000354828 FRYQ5TBA9 3013 aa6.62□□□□□ -1.35
GABPA-201ENST00000354828 A8MTW9 85 aa6.62□□□□□ -1.35
GABPA-201ENST00000354828 SDIM1Q6ZPB5 146 aa6.62□□□□□ -1.35
GABPA-201ENST00000354828 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
GABPA-201ENST00000354828 IGHV6-1A0A0B4J1U7 121 aa6.61□□□□□ -1.35
GABPA-201ENST00000354828 A0A096LNJ9 63 aa6.6□□□□□ -1.35
GABPA-201ENST00000354828 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
GABPA-201ENST00000354828 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
GABPA-201ENST00000354828 C2orf91Q6ZV80 131 aa6.6□□□□□ -1.35
GABPA-201ENST00000354828 RPL37AP61513 92 aaKnown RBP6.6□□□□□ -1.35
GABPA-201ENST00000354828 C5orf47Q569G3 176 aa6.6□□□□□ -1.35
GABPA-201ENST00000354828 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
GABPA-201ENST00000354828 CRYGAP11844 174 aa6.6□□□□□ -1.35
GABPA-201ENST00000354828 A0A087WSZ3 146 aa6.59□□□□□ -1.35
GABPA-201ENST00000354828 LINC00310P59036 64 aa6.59□□□□□ -1.35
GABPA-201ENST00000354828 CELSR3Q9NYQ7 3312 aa6.59□□□□□ -1.36
GABPA-201ENST00000354828 ATMQ13315 3056 aa6.58□□□□□ -1.36
GABPA-201ENST00000354828 ATP5EP2Q5VTU8 51 aa6.58□□□□□ -1.36
GABPA-201ENST00000354828 LINC00336Q6ZUF6 198 aa6.58□□□□□ -1.36
GABPA-201ENST00000354828 A0A087WYN8 130 aa6.58□□□□□ -1.36
GABPA-201ENST00000354828 MOBPQ13875 183 aa6.58□□□□□ -1.36
GABPA-201ENST00000354828 IGLV5-39A0A0G2JS06 123 aa6.57□□□□□ -1.36
GABPA-201ENST00000354828 GIG44P09565 113 aaPredicted RBP6.57□□□□□ -1.36
GABPA-201ENST00000354828 TYMSOSQ8TAI1 123 aa6.57□□□□□ -1.36
GABPA-201ENST00000354828 TMEM258P61165 79 aa6.57□□□□□ -1.36
GABPA-201ENST00000354828 RETNLBQ9BQ08 111 aa6.57□□□□□ -1.36
GABPA-201ENST00000354828 COL12A1Q99715 3063 aa6.57□□□□□ -1.36
GABPA-201ENST00000354828 GVQW2A0A096LPI5 108 aaPredicted RBP6.57□□□□□ -1.36
GABPA-201ENST00000354828 SMR3BP02814 79 aaPredicted RBP6.56□□□□□ -1.36
GABPA-201ENST00000354828 REV3LO60673 3130 aa6.56□□□□□ -1.36
GABPA-201ENST00000354828 BOD1L1Q8NFC6 3051 aa6.55□□□□□ -1.36
GABPA-201ENST00000354828 DMXL1Q9Y485 3027 aa6.55□□□□□ -1.36
GABPA-201ENST00000354828 APLNQ9ULZ1 77 aa6.55□□□□□ -1.36
GABPA-201ENST00000354828 Q6ZVQ6 151 aa6.55□□□□□ -1.36
GABPA-201ENST00000354828 SPTBN5Q9NRC6 3674 aaKnown RBP6.55□□□□□ -1.36
GABPA-201ENST00000354828 A0A087WTM6 91 aa6.54□□□□□ -1.36
GABPA-201ENST00000354828 FREM2Q5SZK8 3169 aa6.54□□□□□ -1.36
GABPA-201ENST00000354828 LINC00575Q6W349 94 aa6.54□□□□□ -1.36
GABPA-201ENST00000354828 DEFB116Q30KQ4 102 aa6.54□□□□□ -1.36
GABPA-201ENST00000354828 FAM30AQ9NZY2 134 aa6.53□□□□□ -1.36
GABPA-201ENST00000354828 EPM2AB3EWF7 344 aa6.52□□□□□ -1.37
GABPA-201ENST00000354828 DNAH14Q0VDD8 3507 aa6.52□□□□□ -1.37
GABPA-201ENST00000354828 PRR4Q16378 134 aa6.52□□□□□ -1.37
GABPA-201ENST00000354828 CR1P17927 2039 aa6.52□□□□□ -1.37
GABPA-201ENST00000354828 C3orf22Q8N5N4 141 aa6.51□□□□□ -1.37
GABPA-201ENST00000354828 ITPR2Q14571 2701 aa6.51□□□□□ -1.37
GABPA-201ENST00000354828 C20orf197Q8N268 126 aa6.51□□□□□ -1.37
GABPA-201ENST00000354828 Q8N9L7 120 aa6.51□□□□□ -1.37
GABPA-201ENST00000354828 LINC00476Q8WZB0 136 aa6.51□□□□□ -1.37
GABPA-201ENST00000354828 IGLV5-45A0A087WSX0 123 aa6.5□□□□□ -1.37
GABPA-201ENST00000354828 KIAA0087Q14695 138 aa6.5□□□□□ -1.37
GABPA-201ENST00000354828 CASC10Q5T4H9 136 aa6.5□□□□□ -1.37
GABPA-201ENST00000354828 NOTCH1P46531 2555 aa6.5□□□□□ -1.37
GABPA-201ENST00000354828 J3KT08 172 aa6.5□□□□□ -1.37
GABPA-201ENST00000354828 BCE1O60756 84 aa6.5□□□□□ -1.37
GABPA-201ENST00000354828 UBR5O95071 2799 aaPredicted RBP6.5□□□□□ -1.37
GABPA-201ENST00000354828 Q6Q795 121 aa6.49□□□□□ -1.37
GABPA-201ENST00000354828 FAM168BA1KXE4 195 aa6.48□□□□□ -1.37
GABPA-201ENST00000354828 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
GABPA-201ENST00000354828 LINC01547P58512 204 aaPredicted RBP6.48□□□□□ -1.37
GABPA-201ENST00000354828 LINC01546A6NGU7 62 aa6.48□□□□□ -1.37
GABPA-201ENST00000354828 B5MCH6 92 aa6.48□□□□□ -1.37
GABPA-201ENST00000354828 KALRNO60229 2985 aa6.47□□□□□ -1.37
GABPA-201ENST00000354828 Q8NBF4 154 aa6.47□□□□□ -1.37
GABPA-201ENST00000354828 ADGRG4Q8IZF6 3080 aa6.46□□□□□ -1.37
GABPA-201ENST00000354828 Q6ZRX8 168 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms