RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SMCR5Q8TEV8 140 aa14.97□□□□□ -0.01
NKX2-1-201ENST00000354822 LINC00526Q96FQ7 95 aa14.97□□□□□ -0.01
NKX2-1-201ENST00000354822 WFDC10BQ8IUB3 73 aa14.96□□□□□ -0.01
NKX2-1-201ENST00000354822 TMEM256-PLSCR3K7ERE1 68 aa14.95□□□□□ -0.02
NKX2-1-201ENST00000354822 Q8NDZ9 215 aa14.95□□□□□ -0.02
NKX2-1-201ENST00000354822 C14orf132Q9NPU4 83 aa14.95□□□□□ -0.02
NKX2-1-201ENST00000354822 NHLRC4P0CG21 123 aaPredicted RBP14.95□□□□□ -0.02
NKX2-1-201ENST00000354822 C6orf99Q4VX62 202 aa14.94□□□□□ -0.02
NKX2-1-201ENST00000354822 C9orf129Q5T035 196 aaKnown RBP14.94□□□□□ -0.02
NKX2-1-201ENST00000354822 JMJD7-PLA2G4BH0Y9G9 81 aa14.93□□□□□ -0.02
NKX2-1-201ENST00000354822 C6orf48Q9UBA6 75 aa14.93□□□□□ -0.02
NKX2-1-201ENST00000354822 ZNF561-AS1K7EIQ3 104 aa14.92□□□□□ -0.02
NKX2-1-201ENST00000354822 IGLV6-57P01721 117 aa14.92□□□□□ -0.02
NKX2-1-201ENST00000354822 ESRGQ1W209 222 aa14.9□□□□□ -0.02
NKX2-1-201ENST00000354822 LINC00575Q6W349 94 aa14.9□□□□□ -0.02
NKX2-1-201ENST00000354822 KRTAP26-1Q6PEX3 210 aa14.9□□□□□ -0.02
NKX2-1-201ENST00000354822 DEFB131BA0A096LNP1 70 aa14.88□□□□□ -0.03
NKX2-1-201ENST00000354822 RPL18AQ02543 176 aaKnown RBP14.88□□□□□ -0.03
NKX2-1-201ENST00000354822 C11orf45Q8TAV5 145 aa14.88□□□□□ -0.03
NKX2-1-201ENST00000354822 CAMK2N2Q96S95 79 aa14.87□□□□□ -0.03
NKX2-1-201ENST00000354822 LINC01556Q5JQF7 62 aa14.86□□□□□ -0.03
NKX2-1-201ENST00000354822 C2orf48Q96LS8 159 aa14.86□□□□□ -0.03
NKX2-1-201ENST00000354822 FBN1P35555 2871 aaKnown RBP14.85□□□□□ -0.03
NKX2-1-201ENST00000354822 hADV29S1A0JD25 119 aa14.85□□□□□ -0.03
NKX2-1-201ENST00000354822 F8WDY8 70 aa14.84□□□□□ -0.03
NKX2-1-201ENST00000354822 CCKP06307 115 aa14.84□□□□□ -0.03
NKX2-1-201ENST00000354822 C1orf43Q9BWL3 253 aa14.84□□□□□ -0.03
NKX2-1-201ENST00000354822 HIGD2BQ4VC39 106 aa14.83□□□□□ -0.04
NKX2-1-201ENST00000354822 H3BQ85 93 aa14.83□□□□□ -0.04
NKX2-1-201ENST00000354822 XAGE1AQ9HD64 81 aa14.83□□□□□ -0.04
NKX2-1-201ENST00000354822 C15orf56Q8N910 161 aa14.81□□□□□ -0.04
NKX2-1-201ENST00000354822 LINC00846Q9NV44 126 aa14.81□□□□□ -0.04
NKX2-1-201ENST00000354822 TRAV23DV6A0A075B6W5 121 aa14.8□□□□□ -0.04
NKX2-1-201ENST00000354822 TRBV10-3A0A0K0K1G6 114 aa14.8□□□□□ -0.04
NKX2-1-201ENST00000354822 FAM236AA0A1B0GUQ0 79 aa14.8□□□□□ -0.04
NKX2-1-201ENST00000354822 FAM236BA0A1B0GV22 79 aa14.8□□□□□ -0.04
NKX2-1-201ENST00000354822 Q6ZRU5 148 aa14.78□□□□□ -0.04
NKX2-1-201ENST00000354822 DIRC1Q969H9 104 aa14.78□□□□□ -0.04
NKX2-1-201ENST00000354822 STAB1Q9NY15 2570 aa14.78□□□□□ -0.04
NKX2-1-201ENST00000354822 NDUFC2-KCTD14E9PQ53 114 aa14.78□□□□□ -0.04
NKX2-1-201ENST00000354822 Q6JHZ5 121 aa14.78□□□□□ -0.04
NKX2-1-201ENST00000354822 CMYA5Q8N3K9 4069 aa14.77□□□□□ -0.05
NKX2-1-201ENST00000354822 IGKV2D-24A0A075B6R9 120 aa14.76□□□□□ -0.05
NKX2-1-201ENST00000354822 TRBV7-6A0A0J9YX20 115 aa14.76□□□□□ -0.05
NKX2-1-201ENST00000354822 DNAH10OSP0CZ25 163 aa14.75□□□□□ -0.05
NKX2-1-201ENST00000354822 VPREB1P12018 145 aa14.75□□□□□ -0.05
NKX2-1-201ENST00000354822 M0R378 163 aa14.75□□□□□ -0.05
NKX2-1-201ENST00000354822 CCDC179H3BU77 68 aa14.74□□□□□ -0.05
NKX2-1-201ENST00000354822 ZNF73O43830 326 aaPredicted RBP14.74□□□□□ -0.05
NKX2-1-201ENST00000354822 GHRHP01286 108 aa14.74□□□□□ -0.05
NKX2-1-201ENST00000354822 ANK2Q01484 3957 aa14.74□□□□□ -0.05
NKX2-1-201ENST00000354822 TRAV10A0A0B4J240 114 aa14.73□□□□□ -0.05
NKX2-1-201ENST00000354822 RBM3P98179 157 aaKnown RBP14.73□□□□□ -0.05
NKX2-1-201ENST00000354822 COX7BP24311 80 aa14.71□□□□□ -0.05
NKX2-1-201ENST00000354822 BAHCC1Q9P281 2608 aa14.71□□□□□ -0.05
NKX2-1-201ENST00000354822 B5MCH6 92 aa14.71□□□□□ -0.05
NKX2-1-201ENST00000354822 DNAH3Q8TD57 4116 aa14.7□□□□□ -0.06
NKX2-1-201ENST00000354822 ELOF1P60002 83 aaKnown RBP14.7□□□□□ -0.06
NKX2-1-201ENST00000354822 SYCNQ0VAF6 134 aa14.7□□□□□ -0.06
NKX2-1-201ENST00000354822 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.7□□□□□ -0.06
NKX2-1-201ENST00000354822 Q6ZQY7 126 aa14.7□□□□□ -0.06
NKX2-1-201ENST00000354822 LAMTOR3Q9UHA4 124 aa14.7□□□□□ -0.06
NKX2-1-201ENST00000354822 LOC110117498A0A087WWA1 95 aa14.68□□□□□ -0.06
NKX2-1-201ENST00000354822 PRB2P02812 416 aaPredicted RBP14.67□□□□□ -0.06
NKX2-1-201ENST00000354822 MAST4O15021 2626 aa14.67□□□□□ -0.06
NKX2-1-201ENST00000354822 IGKV3D-7A0A0C4DH55 119 aa14.67□□□□□ -0.06
NKX2-1-201ENST00000354822 PKD1L1Q8TDX9 2849 aa14.66□□□□□ -0.06
NKX2-1-201ENST00000354822 PDE6GP18545 87 aa14.66□□□□□ -0.06
NKX2-1-201ENST00000354822 HIST1H4AP62805 103 aaKnown RBP14.66□□□□□ -0.06
NKX2-1-201ENST00000354822 Q6ZRP5 223 aa14.66□□□□□ -0.06
NKX2-1-201ENST00000354822 TM2D3Q9BRN9 247 aa14.66□□□□□ -0.06
NKX2-1-201ENST00000354822 K7EIL1 84 aa14.66□□□□□ -0.06
NKX2-1-201ENST00000354822 ATP5EP2Q5VTU8 51 aa14.66□□□□□ -0.06
NKX2-1-201ENST00000354822 Q6ZQT0 140 aa14.65□□□□□ -0.06
NKX2-1-201ENST00000354822 DSCR8Q96T75 97 aa14.64□□□□□ -0.07
NKX2-1-201ENST00000354822 UBL5Q9BZL1 73 aa14.63□□□□□ -0.07
NKX2-1-201ENST00000354822 LINC00588Q9Y4M8 146 aa14.63□□□□□ -0.07
NKX2-1-201ENST00000354822 ATOX1O00244 68 aa14.62□□□□□ -0.07
NKX2-1-201ENST00000354822 TENM3Q9P273 2699 aa14.61□□□□□ -0.07
NKX2-1-201ENST00000354822 TLX1NBP0CAT3 122 aa14.6□□□□□ -0.07
NKX2-1-201ENST00000354822 RMI2Q96E14 147 aa14.59□□□□□ -0.07
NKX2-1-201ENST00000354822 UQCRQO14949 82 aa14.58□□□□□ -0.07
NKX2-1-201ENST00000354822 MRAPQ8TCY5 172 aa14.58□□□□□ -0.07
NKX2-1-201ENST00000354822 LINC00528Q8N1L1 170 aa14.58□□□□□ -0.08
NKX2-1-201ENST00000354822 C3orf22Q8N5N4 141 aa14.58□□□□□ -0.08
NKX2-1-201ENST00000354822 COL6A5A8TX70 2615 aa14.57□□□□□ -0.08
NKX2-1-201ENST00000354822 NKAPP1Q8N9T2 125 aa14.57□□□□□ -0.08
NKX2-1-201ENST00000354822 PLA2G2DQ9UNK4 145 aa14.56□□□□□ -0.08
NKX2-1-201ENST00000354822 KCNQ1DNQ9H478 68 aa14.55□□□□□ -0.08
NKX2-1-201ENST00000354822 SS18L2Q9UHA2 77 aa14.54□□□□□ -0.08
NKX2-1-201ENST00000354822 COX7CP15954 63 aa14.53□□□□□ -0.08
NKX2-1-201ENST00000354822 USP17L23D6RBM5 183 aa14.53□□□□□ -0.08
NKX2-1-201ENST00000354822 UPK3BQ9BT76 320 aa14.53□□□□□ -0.08
NKX2-1-201ENST00000354822 TRBV7-4A0A0J9YYF1 115 aa14.51□□□□□ -0.09
NKX2-1-201ENST00000354822 A0A087WVE0 104 aa14.5□□□□□ -0.09
NKX2-1-201ENST00000354822 C9orf153Q5TBE3 101 aa14.49□□□□□ -0.09
NKX2-1-201ENST00000354822 SERTAD4-AS1Q5TG53 156 aa14.49□□□□□ -0.09
NKX2-1-201ENST00000354822 C7orf33Q8WU49 177 aa14.49□□□□□ -0.09
NKX2-1-201ENST00000354822 NOTCH1P46531 2555 aa14.48□□□□□ -0.09
NKX2-1-201ENST00000354822 IGLV5-37A0A075B6J1 123 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms