RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 LINC00167Q96N53 147 aa6.96□□□□□ -1.3
COL11A1-201ENST00000353414 MYO9AB2RTY4 2548 aa6.96□□□□□ -1.3
COL11A1-201ENST00000353414 LINC00846Q9NV44 126 aa6.95□□□□□ -1.3
COL11A1-201ENST00000353414 C2CD3Q4AC94 2353 aa6.94□□□□□ -1.3
COL11A1-201ENST00000353414 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
COL11A1-201ENST00000353414 BRCA2P51587 3418 aa6.94□□□□□ -1.3
COL11A1-201ENST00000353414 ST20-AS1Q8NBB2 130 aa6.94□□□□□ -1.3
COL11A1-201ENST00000353414 APLNQ9ULZ1 77 aa6.94□□□□□ -1.3
COL11A1-201ENST00000353414 KRTAP24-1Q3LI83 254 aa6.93□□□□□ -1.3
COL11A1-201ENST00000353414 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
COL11A1-201ENST00000353414 ACYP2P14621 99 aa6.93□□□□□ -1.3
COL11A1-201ENST00000353414 MUC22E2RYF6 1773 aaPredicted RBP6.93□□□□□ -1.3
COL11A1-201ENST00000353414 ZFYVE26Q68DK2 2539 aa6.93□□□□□ -1.3
COL11A1-201ENST00000353414 MUC7Q8TAX7 377 aa6.92□□□□□ -1.3
COL11A1-201ENST00000353414 YPEL4Q96NS1 127 aa6.91□□□□□ -1.3
COL11A1-201ENST00000353414 C8orf87E5RJ46 101 aa6.9□□□□□ -1.3
COL11A1-201ENST00000353414 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
COL11A1-201ENST00000353414 URB1-AS1Q96HZ7 61 aa6.9□□□□□ -1.3
COL11A1-201ENST00000353414 EPM2AB3EWF7 344 aa6.9□□□□□ -1.3
COL11A1-201ENST00000353414 FN1P02751 2386 aaKnown RBP6.9□□□□□ -1.31
COL11A1-201ENST00000353414 PRO0628Q9UI54 55 aa6.89□□□□□ -1.31
COL11A1-201ENST00000353414 AMELXQ99217 191 aa6.89□□□□□ -1.31
COL11A1-201ENST00000353414 SPATA3Q8NHX4 192 aa6.88□□□□□ -1.31
COL11A1-201ENST00000353414 TLN1Q9Y490 2541 aaKnown RBP6.88□□□□□ -1.31
COL11A1-201ENST00000353414 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
COL11A1-201ENST00000353414 Q8N2B8 174 aa6.87□□□□□ -1.31
COL11A1-201ENST00000353414 IGF2RP11717 2491 aa6.87□□□□□ -1.31
COL11A1-201ENST00000353414 NAV2Q8IVL1 2488 aa6.87□□□□□ -1.31
COL11A1-201ENST00000353414 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
COL11A1-201ENST00000353414 IGLV6-57P01721 117 aa6.86□□□□□ -1.31
COL11A1-201ENST00000353414 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
COL11A1-201ENST00000353414 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
COL11A1-201ENST00000353414 LINC00588Q9Y4M8 146 aa6.86□□□□□ -1.31
COL11A1-201ENST00000353414 Q6ZRP5 223 aa6.86□□□□□ -1.31
COL11A1-201ENST00000353414 LAMA3Q16787 3333 aa6.85□□□□□ -1.31
COL11A1-201ENST00000353414 CXCL6P80162 114 aa6.85□□□□□ -1.31
COL11A1-201ENST00000353414 CDIP1Q9H305 208 aa6.85□□□□□ -1.31
COL11A1-201ENST00000353414 CNFNQ9BYD5 112 aa6.85□□□□□ -1.31
COL11A1-201ENST00000353414 ANAPC11Q9NYG5 84 aa6.84□□□□□ -1.31
COL11A1-201ENST00000353414 JMJD1CQ15652 2540 aa6.84□□□□□ -1.31
COL11A1-201ENST00000353414 F8WDY8 70 aa6.84□□□□□ -1.31
COL11A1-201ENST00000353414 DSCR10P59022 87 aa6.84□□□□□ -1.31
COL11A1-201ENST00000353414 OBSCN-AS1Q96MR7 158 aa6.82□□□□□ -1.32
COL11A1-201ENST00000353414 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
COL11A1-201ENST00000353414 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
COL11A1-201ENST00000353414 WWC2-AS2Q96NR7 200 aa6.82□□□□□ -1.32
COL11A1-201ENST00000353414 LINC00310P59036 64 aa6.82□□□□□ -1.32
COL11A1-201ENST00000353414 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
COL11A1-201ENST00000353414 C11orf72Q8NBR9 251 aa6.81□□□□□ -1.32
COL11A1-201ENST00000353414 A0A0D9SG42 100 aa6.81□□□□□ -1.32
COL11A1-201ENST00000353414 FAM218AQ96MZ4 157 aa6.81□□□□□ -1.32
COL11A1-201ENST00000353414 NCOR2Q9Y618 2525 aa6.8□□□□□ -1.32
COL11A1-201ENST00000353414 Q8NBF4 154 aa6.8□□□□□ -1.32
COL11A1-201ENST00000353414 TM2D3Q9BRN9 247 aa6.8□□□□□ -1.32
COL11A1-201ENST00000353414 FAM19A4Q96LR4 140 aa6.79□□□□□ -1.32
COL11A1-201ENST00000353414 C10orf142B7Z368 130 aa6.79□□□□□ -1.32
COL11A1-201ENST00000353414 PCSK5Q92824 1860 aa6.78□□□□□ -1.32
COL11A1-201ENST00000353414 K7EQZ3 153 aa6.78□□□□□ -1.32
COL11A1-201ENST00000353414 COL4A2P08572 1712 aa6.78□□□□□ -1.32
COL11A1-201ENST00000353414 LINC01600Q96MT4 127 aa6.78□□□□□ -1.32
COL11A1-201ENST00000353414 PRUNE2Q8WUY3 3088 aa6.78□□□□□ -1.32
COL11A1-201ENST00000353414 A0A096LNJ9 63 aa6.78□□□□□ -1.32
COL11A1-201ENST00000353414 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
COL11A1-201ENST00000353414 C9orf129Q5T035 196 aaKnown RBP6.76□□□□□ -1.33
COL11A1-201ENST00000353414 BCE1O60756 84 aa6.76□□□□□ -1.33
COL11A1-201ENST00000353414 A8MUN3 132 aa6.76□□□□□ -1.33
COL11A1-201ENST00000353414 KRTAP10-11P60412 298 aa6.75□□□□□ -1.33
COL11A1-201ENST00000353414 ABCA12Q86UK0 2595 aa6.75□□□□□ -1.33
COL11A1-201ENST00000353414 Q6ZRX8 168 aa6.75□□□□□ -1.33
COL11A1-201ENST00000353414 TLN2Q9Y4G6 2542 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 ACANP16112 2415 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 ELOF1P60002 83 aaKnown RBP6.74□□□□□ -1.33
COL11A1-201ENST00000353414 LINC01561Q8N1V8 128 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 CDH23Q9H251 3354 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
COL11A1-201ENST00000353414 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
COL11A1-201ENST00000353414 COA5Q86WW8 74 aa6.72□□□□□ -1.33
COL11A1-201ENST00000353414 Q8NAQ8 132 aa6.72□□□□□ -1.33
COL11A1-201ENST00000353414 LAMA2P24043 3122 aaKnown RBP6.72□□□□□ -1.33
COL11A1-201ENST00000353414 DNAH14Q0VDD8 3507 aa6.72□□□□□ -1.33
COL11A1-201ENST00000353414 ZNF575Q86XF7 245 aa6.72□□□□□ -1.33
COL11A1-201ENST00000353414 CELSR3Q9NYQ7 3312 aa6.72□□□□□ -1.33
COL11A1-201ENST00000353414 M0R2T5 61 aa6.72□□□□□ -1.33
COL11A1-201ENST00000353414 F8P00451 2351 aa6.71□□□□□ -1.33
COL11A1-201ENST00000353414 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
COL11A1-201ENST00000353414 TRBV7-4A0A0J9YYF1 115 aa6.7□□□□□ -1.34
COL11A1-201ENST00000353414 Q6ZQT0 140 aa6.7□□□□□ -1.34
COL11A1-201ENST00000353414 ANKRD17O75179 2603 aaKnown RBP6.69□□□□□ -1.34
COL11A1-201ENST00000353414 MIR22HGQ0VDD5 57 aa6.69□□□□□ -1.34
COL11A1-201ENST00000353414 K7EIL1 84 aa6.69□□□□□ -1.34
COL11A1-201ENST00000353414 PIEZO1Q92508 2521 aa6.69□□□□□ -1.34
COL11A1-201ENST00000353414 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
COL11A1-201ENST00000353414 SZT2Q5T011 3432 aa6.68□□□□□ -1.34
COL11A1-201ENST00000353414 Q8N1X5 172 aa6.67□□□□□ -1.34
COL11A1-201ENST00000353414 IGLV5-39A0A0G2JS06 123 aa6.67□□□□□ -1.34
COL11A1-201ENST00000353414 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
COL11A1-201ENST00000353414 WIPF1O43516 503 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms