RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 LYPD5Q6UWN5 251 aa16.58■□□□□ 0.24
CPNE1-202ENST00000352393 PRR34Q9NV39 138 aa16.58■□□□□ 0.24
CPNE1-202ENST00000352393 HIVEP2P31629 2446 aa16.58■□□□□ 0.24
CPNE1-202ENST00000352393 VWFP04275 2813 aa16.58■□□□□ 0.24
CPNE1-202ENST00000352393 CYSRT1A8MQ03 144 aa16.57■□□□□ 0.24
CPNE1-202ENST00000352393 IGLV6-57P01721 117 aa16.57■□□□□ 0.24
CPNE1-202ENST00000352393 MIFP14174 115 aa16.57■□□□□ 0.24
CPNE1-202ENST00000352393 hADV29S1A0JD25 119 aa16.56■□□□□ 0.24
CPNE1-202ENST00000352393 UPK3BQ9BT76 320 aa16.55■□□□□ 0.24
CPNE1-202ENST00000352393 CYSTM1Q9H1C7 97 aa16.54■□□□□ 0.24
CPNE1-202ENST00000352393 ZNF561-AS1K7EIQ3 104 aa16.54■□□□□ 0.24
CPNE1-202ENST00000352393 GVQW2A0A096LPI5 108 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-202ENST00000352393 SPART-AS1P0CW21 52 aa16.52■□□□□ 0.24
CPNE1-202ENST00000352393 FASNP49327 2511 aaKnown RBP16.52■□□□□ 0.24
CPNE1-202ENST00000352393 Q6ZQT0 140 aa16.52■□□□□ 0.24
CPNE1-202ENST00000352393 KLK12Q9UKR0 248 aa16.52■□□□□ 0.24
CPNE1-202ENST00000352393 LOC110117498A0A087WWA1 95 aa16.51■□□□□ 0.23
CPNE1-202ENST00000352393 HTN3P15516 51 aa16.51■□□□□ 0.23
CPNE1-202ENST00000352393 ENHOQ6UWT2 76 aa16.51■□□□□ 0.23
CPNE1-202ENST00000352393 UBL5Q9BZL1 73 aa16.5■□□□□ 0.23
CPNE1-202ENST00000352393 RBM3P98179 157 aaKnown RBP16.49■□□□□ 0.23
CPNE1-202ENST00000352393 TRBV10-3A0A0K0K1G6 114 aa16.49■□□□□ 0.23
CPNE1-202ENST00000352393 WFDC9Q8NEX5 89 aa16.49■□□□□ 0.23
CPNE1-202ENST00000352393 FAM19A1Q7Z5A9 133 aa16.47■□□□□ 0.23
CPNE1-202ENST00000352393 C6orf48Q9UBA6 75 aa16.47■□□□□ 0.23
CPNE1-202ENST00000352393 LAMTOR3Q9UHA4 124 aa16.45■□□□□ 0.22
CPNE1-202ENST00000352393 Q6ZQY7 126 aa16.44■□□□□ 0.22
CPNE1-202ENST00000352393 TRAV23DV6A0A075B6W5 121 aa16.43■□□□□ 0.22
CPNE1-202ENST00000352393 J3KT08 172 aa16.43■□□□□ 0.22
CPNE1-202ENST00000352393 M0R2N4 97 aa16.42■□□□□ 0.22
CPNE1-202ENST00000352393 GHRHP01286 108 aa16.42■□□□□ 0.22
CPNE1-202ENST00000352393 TMEM258P61165 79 aa16.42■□□□□ 0.22
CPNE1-202ENST00000352393 H3BQ85 93 aa16.41■□□□□ 0.22
CPNE1-202ENST00000352393 DIRC1Q969H9 104 aa16.41■□□□□ 0.22
CPNE1-202ENST00000352393 XAGE1AQ9HD64 81 aa16.4■□□□□ 0.22
CPNE1-202ENST00000352393 LOC107984640A0A0U1RRK4 108 aa16.39■□□□□ 0.21
CPNE1-202ENST00000352393 INAFM1C9JVW0 142 aa16.37■□□□□ 0.21
CPNE1-202ENST00000352393 RPS28P62857 69 aaKnown RBP16.37■□□□□ 0.21
CPNE1-202ENST00000352393 DSCR8Q96T75 97 aa16.37■□□□□ 0.21
CPNE1-202ENST00000352393 HECTD1Q9ULT8 2610 aa16.37■□□□□ 0.21
CPNE1-202ENST00000352393 PDE6GP18545 87 aa16.36■□□□□ 0.21
CPNE1-202ENST00000352393 TENM1Q9UKZ4 2725 aa16.36■□□□□ 0.21
CPNE1-202ENST00000352393 ZNF73O43830 326 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-202ENST00000352393 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-202ENST00000352393 Q6ZVQ6 151 aa16.34■□□□□ 0.21
CPNE1-202ENST00000352393 NOTCH2Q04721 2471 aa16.34■□□□□ 0.21
CPNE1-202ENST00000352393 LINC01547P58512 204 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-202ENST00000352393 COX7BP24311 80 aa16.33■□□□□ 0.21
CPNE1-202ENST00000352393 ELOF1P60002 83 aaKnown RBP16.33■□□□□ 0.21
CPNE1-202ENST00000352393 VPREB1P12018 145 aa16.33■□□□□ 0.2
CPNE1-202ENST00000352393 KRTAP26-1Q6PEX3 210 aa16.33■□□□□ 0.2
CPNE1-202ENST00000352393 TRBV7-6A0A0J9YX20 115 aa16.32■□□□□ 0.2
CPNE1-202ENST00000352393 WIPF1O43516 503 aa16.32■□□□□ 0.2
CPNE1-202ENST00000352393 WFDC10BQ8IUB3 73 aa16.32■□□□□ 0.2
CPNE1-202ENST00000352393 HIVEP1P15822 2718 aa16.32■□□□□ 0.2
CPNE1-202ENST00000352393 OTOGQ6ZRI0 2925 aa16.31■□□□□ 0.2
CPNE1-202ENST00000352393 HIGD2BQ4VC39 106 aa16.31■□□□□ 0.2
CPNE1-202ENST00000352393 CAMK2N2Q96S95 79 aa16.3■□□□□ 0.2
CPNE1-202ENST00000352393 TRBV7-4A0A0J9YYF1 115 aa16.3■□□□□ 0.2
CPNE1-202ENST00000352393 EGFEM1PQ0D2K5 195 aa16.29■□□□□ 0.2
CPNE1-202ENST00000352393 DPH3Q96FX2 82 aa16.29■□□□□ 0.2
CPNE1-202ENST00000352393 NSD1Q96L73 2696 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-202ENST00000352393 BCE1O60756 84 aa16.28■□□□□ 0.2
CPNE1-202ENST00000352393 H3BNG1 76 aa16.27■□□□□ 0.2
CPNE1-202ENST00000352393 CXCL6P80162 114 aa16.26■□□□□ 0.19
CPNE1-202ENST00000352393 HAMPP81172 84 aa16.26■□□□□ 0.19
CPNE1-202ENST00000352393 KPRPQ5T749 579 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-202ENST00000352393 Q6ZRU5 148 aa16.25■□□□□ 0.19
CPNE1-202ENST00000352393 C15orf56Q8N910 161 aa16.25■□□□□ 0.19
CPNE1-202ENST00000352393 M0R378 163 aa16.25■□□□□ 0.19
CPNE1-202ENST00000352393 FAM19A5Q7Z5A7 132 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-202ENST00000352393 NDUFC2-KCTD14E9PQ53 114 aa16.23■□□□□ 0.19
CPNE1-202ENST00000352393 LINC00528Q8N1L1 170 aa16.21■□□□□ 0.19
CPNE1-202ENST00000352393 TRAV7A0A075B6U4 112 aa16.21■□□□□ 0.18
CPNE1-202ENST00000352393 C20orf197Q8N268 126 aa16.2■□□□□ 0.18
CPNE1-202ENST00000352393 RETNQ9HD89 108 aa16.19■□□□□ 0.18
CPNE1-202ENST00000352393 ATRQ13535 2644 aa16.18■□□□□ 0.18
CPNE1-202ENST00000352393 TEP1Q99973 2627 aaKnown RBP16.18■□□□□ 0.18
CPNE1-202ENST00000352393 OXTP01178 125 aa16.18■□□□□ 0.18
CPNE1-202ENST00000352393 Q6ZTC4 211 aa16.16■□□□□ 0.18
CPNE1-202ENST00000352393 TRAV10A0A0B4J240 114 aa16.16■□□□□ 0.18
CPNE1-202ENST00000352393 TRRAPQ9Y4A5 3859 aa16.14■□□□□ 0.17
CPNE1-202ENST00000352393 ESRGQ1W209 222 aa16.13■□□□□ 0.17
CPNE1-202ENST00000352393 Q6ZRP5 223 aa16.13■□□□□ 0.17
CPNE1-202ENST00000352393 C1orf43Q9BWL3 253 aa16.12■□□□□ 0.17
CPNE1-202ENST00000352393 F8WDY8 70 aa16.1■□□□□ 0.17
CPNE1-202ENST00000352393 BAHCC1Q9P281 2608 aa16.1■□□□□ 0.17
CPNE1-202ENST00000352393 SCXQ7RTU7 201 aa16.1■□□□□ 0.17
CPNE1-202ENST00000352393 LINC01556Q5JQF7 62 aa16.09■□□□□ 0.17
CPNE1-202ENST00000352393 KLKP1Q107X0 134 aa16.08■□□□□ 0.16
CPNE1-202ENST00000352393 H7BZZ5 65 aa16.07■□□□□ 0.16
CPNE1-202ENST00000352393 KRTAP10-11P60412 298 aa16.07■□□□□ 0.16
CPNE1-202ENST00000352393 SYCNQ0VAF6 134 aa16.06■□□□□ 0.16
CPNE1-202ENST00000352393 OXLD1Q5BKU9 147 aa16.06■□□□□ 0.16
CPNE1-202ENST00000352393 IGKV2D-24A0A075B6R9 120 aa16.05■□□□□ 0.16
CPNE1-202ENST00000352393 FAM236DA0A1B0GTK5 79 aa16.05■□□□□ 0.16
CPNE1-202ENST00000352393 FAM236CP0DP71 79 aa16.05■□□□□ 0.16
CPNE1-202ENST00000352393 KCNQ1DNQ9H478 68 aa16.04■□□□□ 0.16
CPNE1-202ENST00000352393 SERTAD4-AS1Q5TG53 156 aa16.01■□□□□ 0.15
CPNE1-202ENST00000352393 C7orf33Q8WU49 177 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms