RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 S100A7L2Q5SY68 101 aa14.88□□□□□ -0.03
UPF3A-201ENST00000351487 EGFEM1PQ0D2K5 195 aa14.86□□□□□ -0.03
UPF3A-201ENST00000351487 WFDC10BQ8IUB3 73 aa14.85□□□□□ -0.03
UPF3A-201ENST00000351487 TMEM256-PLSCR3K7ERE1 68 aa14.85□□□□□ -0.03
UPF3A-201ENST00000351487 C6orf48Q9UBA6 75 aa14.85□□□□□ -0.03
UPF3A-201ENST00000351487 IGLV6-57P01721 117 aa14.84□□□□□ -0.03
UPF3A-201ENST00000351487 Q6ZTC4 211 aa14.84□□□□□ -0.03
UPF3A-201ENST00000351487 JMJD7-PLA2G4BH0Y9G9 81 aa14.83□□□□□ -0.04
UPF3A-201ENST00000351487 FAM236AA0A1B0GUQ0 79 aa14.82□□□□□ -0.04
UPF3A-201ENST00000351487 FAM236BA0A1B0GV22 79 aa14.82□□□□□ -0.04
UPF3A-201ENST00000351487 LINC00575Q6W349 94 aa14.82□□□□□ -0.04
UPF3A-201ENST00000351487 KRTAP26-1Q6PEX3 210 aa14.82□□□□□ -0.04
UPF3A-201ENST00000351487 CCDC179H3BU77 68 aa14.81□□□□□ -0.04
UPF3A-201ENST00000351487 LINC00846Q9NV44 126 aa14.8□□□□□ -0.04
UPF3A-201ENST00000351487 RPL18AQ02543 176 aaKnown RBP14.8□□□□□ -0.04
UPF3A-201ENST00000351487 CCKP06307 115 aa14.79□□□□□ -0.04
UPF3A-201ENST00000351487 F8P00451 2351 aa14.78□□□□□ -0.04
UPF3A-201ENST00000351487 KRTAP24-1Q3LI83 254 aa14.77□□□□□ -0.04
UPF3A-201ENST00000351487 Q6JHZ5 121 aa14.77□□□□□ -0.05
UPF3A-201ENST00000351487 B5MCH6 92 aa14.76□□□□□ -0.05
UPF3A-201ENST00000351487 ZNF561-AS1K7EIQ3 104 aa14.76□□□□□ -0.05
UPF3A-201ENST00000351487 hADV29S1A0JD25 119 aa14.75□□□□□ -0.05
UPF3A-201ENST00000351487 ESRGQ1W209 222 aa14.75□□□□□ -0.05
UPF3A-201ENST00000351487 CAMK2N2Q96S95 79 aa14.74□□□□□ -0.05
UPF3A-201ENST00000351487 XAGE1AQ9HD64 81 aa14.74□□□□□ -0.05
UPF3A-201ENST00000351487 HIGD2BQ4VC39 106 aa14.73□□□□□ -0.05
UPF3A-201ENST00000351487 TRBV10-3A0A0K0K1G6 114 aa14.73□□□□□ -0.05
UPF3A-201ENST00000351487 C15orf56Q8N910 161 aa14.73□□□□□ -0.05
UPF3A-201ENST00000351487 FLNBO75369 2602 aaKnown RBP14.71□□□□□ -0.05
UPF3A-201ENST00000351487 TRAV23DV6A0A075B6W5 121 aa14.71□□□□□ -0.05
UPF3A-201ENST00000351487 HIST1H4AP62805 103 aaKnown RBP14.71□□□□□ -0.05
UPF3A-201ENST00000351487 LINC01556Q5JQF7 62 aa14.71□□□□□ -0.05
UPF3A-201ENST00000351487 C2orf48Q96LS8 159 aa14.71□□□□□ -0.05
UPF3A-201ENST00000351487 C3orf56Q8N813 242 aa14.69□□□□□ -0.06
UPF3A-201ENST00000351487 DIRC1Q969H9 104 aa14.69□□□□□ -0.06
UPF3A-201ENST00000351487 DEFB131BA0A096LNP1 70 aa14.69□□□□□ -0.06
UPF3A-201ENST00000351487 VPREB1P12018 145 aa14.69□□□□□ -0.06
UPF3A-201ENST00000351487 Q6ZRU5 148 aa14.69□□□□□ -0.06
UPF3A-201ENST00000351487 C1orf43Q9BWL3 253 aa14.68□□□□□ -0.06
UPF3A-201ENST00000351487 C11orf45Q8TAV5 145 aa14.68□□□□□ -0.06
UPF3A-201ENST00000351487 H3BQ85 93 aa14.66□□□□□ -0.06
UPF3A-201ENST00000351487 IGKV3D-7A0A0C4DH55 119 aa14.66□□□□□ -0.06
UPF3A-201ENST00000351487 NDUFC2-KCTD14E9PQ53 114 aa14.66□□□□□ -0.06
UPF3A-201ENST00000351487 F8WDY8 70 aa14.66□□□□□ -0.06
UPF3A-201ENST00000351487 TENM3Q9P273 2699 aa14.66□□□□□ -0.06
UPF3A-201ENST00000351487 ZNF73O43830 326 aaPredicted RBP14.65□□□□□ -0.06
UPF3A-201ENST00000351487 SS18L2Q9UHA2 77 aa14.65□□□□□ -0.06
UPF3A-201ENST00000351487 TRBV7-6A0A0J9YX20 115 aa14.64□□□□□ -0.07
UPF3A-201ENST00000351487 Q6ZQY7 126 aa14.64□□□□□ -0.07
UPF3A-201ENST00000351487 LOC110117498A0A087WWA1 95 aa14.64□□□□□ -0.07
UPF3A-201ENST00000351487 RBM3P98179 157 aaKnown RBP14.63□□□□□ -0.07
UPF3A-201ENST00000351487 M0R378 163 aa14.62□□□□□ -0.07
UPF3A-201ENST00000351487 ELOF1P60002 83 aaKnown RBP14.62□□□□□ -0.07
UPF3A-201ENST00000351487 Q6ZQT0 140 aa14.62□□□□□ -0.07
UPF3A-201ENST00000351487 BAHCC1Q9P281 2608 aa14.62□□□□□ -0.07
UPF3A-201ENST00000351487 ATP5EP2Q5VTU8 51 aa14.61□□□□□ -0.07
UPF3A-201ENST00000351487 PKD1L1Q8TDX9 2849 aa14.61□□□□□ -0.07
UPF3A-201ENST00000351487 DNAH10OSP0CZ25 163 aa14.61□□□□□ -0.07
UPF3A-201ENST00000351487 COX7BP24311 80 aa14.61□□□□□ -0.07
UPF3A-201ENST00000351487 IGKV2D-24A0A075B6R9 120 aa14.6□□□□□ -0.07
UPF3A-201ENST00000351487 ATOX1O00244 68 aa14.6□□□□□ -0.07
UPF3A-201ENST00000351487 LAMTOR3Q9UHA4 124 aa14.6□□□□□ -0.07
UPF3A-201ENST00000351487 STAB1Q9NY15 2570 aa14.6□□□□□ -0.07
UPF3A-201ENST00000351487 CMYA5Q8N3K9 4069 aa14.6□□□□□ -0.07
UPF3A-201ENST00000351487 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-201ENST00000351487 ANK2Q01484 3957 aa14.59□□□□□ -0.07
UPF3A-201ENST00000351487 UQCRQO14949 82 aa14.58□□□□□ -0.07
UPF3A-201ENST00000351487 C3orf22Q8N5N4 141 aa14.58□□□□□ -0.07
UPF3A-201ENST00000351487 Q6ZRP5 223 aa14.57□□□□□ -0.08
UPF3A-201ENST00000351487 DNAH3Q8TD57 4116 aa14.56□□□□□ -0.08
UPF3A-201ENST00000351487 SYCNQ0VAF6 134 aa14.56□□□□□ -0.08
UPF3A-201ENST00000351487 UBL5Q9BZL1 73 aa14.56□□□□□ -0.08
UPF3A-201ENST00000351487 FBN1P35555 2871 aaKnown RBP14.55□□□□□ -0.08
UPF3A-201ENST00000351487 GHRHP01286 108 aa14.55□□□□□ -0.08
UPF3A-201ENST00000351487 PDE6GP18545 87 aa14.54□□□□□ -0.08
UPF3A-201ENST00000351487 A0A087WVE0 104 aa14.54□□□□□ -0.08
UPF3A-201ENST00000351487 COX7CP15954 63 aa14.54□□□□□ -0.08
UPF3A-201ENST00000351487 DSCR8Q96T75 97 aa14.53□□□□□ -0.08
UPF3A-201ENST00000351487 TRAV10A0A0B4J240 114 aa14.53□□□□□ -0.08
UPF3A-201ENST00000351487 LINC00528Q8N1L1 170 aa14.52□□□□□ -0.08
UPF3A-201ENST00000351487 C9orf153Q5TBE3 101 aa14.51□□□□□ -0.09
UPF3A-201ENST00000351487 MAST4O15021 2626 aa14.5□□□□□ -0.09
UPF3A-201ENST00000351487 TRBV7-4A0A0J9YYF1 115 aa14.48□□□□□ -0.09
UPF3A-201ENST00000351487 USP17L23D6RBM5 183 aa14.48□□□□□ -0.09
UPF3A-201ENST00000351487 M0R2N4 97 aa14.48□□□□□ -0.09
UPF3A-201ENST00000351487 TLX1NBP0CAT3 122 aa14.47□□□□□ -0.09
UPF3A-201ENST00000351487 LINC00588Q9Y4M8 146 aa14.47□□□□□ -0.09
UPF3A-201ENST00000351487 TM2D3Q9BRN9 247 aa14.47□□□□□ -0.09
UPF3A-201ENST00000351487 KCNQ1DNQ9H478 68 aa14.44□□□□□ -0.1
UPF3A-201ENST00000351487 CRYGAP11844 174 aa14.43□□□□□ -0.1
UPF3A-201ENST00000351487 SERP2Q8N6R1 65 aa14.43□□□□□ -0.1
UPF3A-201ENST00000351487 NKAPP1Q8N9T2 125 aa14.43□□□□□ -0.1
UPF3A-201ENST00000351487 PLA2G2DQ9UNK4 145 aa14.43□□□□□ -0.1
UPF3A-201ENST00000351487 SERTAD4-AS1Q5TG53 156 aa14.42□□□□□ -0.1
UPF3A-201ENST00000351487 Q6ZVQ6 151 aa14.42□□□□□ -0.1
UPF3A-201ENST00000351487 FAM19A1Q7Z5A9 133 aa14.42□□□□□ -0.1
UPF3A-201ENST00000351487 MRAPQ8TCY5 172 aa14.42□□□□□ -0.1
UPF3A-201ENST00000351487 NOTCH1P46531 2555 aa14.41□□□□□ -0.1
UPF3A-201ENST00000351487 C7orf33Q8WU49 177 aa14.41□□□□□ -0.1
UPF3A-201ENST00000351487 PRB2P02812 416 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms