RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RPL18AQ02543 176 aaKnown RBP12.22□□□□□ -0.45
PTP4A3-202ENST00000349124 Q6JHZ5 121 aa12.22□□□□□ -0.45
PTP4A3-202ENST00000349124 CYSTM1Q9H1C7 97 aa12.22□□□□□ -0.45
PTP4A3-202ENST00000349124 TMEM256-PLSCR3K7ERE1 68 aa12.21□□□□□ -0.46
PTP4A3-202ENST00000349124 APOC4P55056 127 aa12.21□□□□□ -0.46
PTP4A3-202ENST00000349124 ENHOQ6UWT2 76 aa12.21□□□□□ -0.46
PTP4A3-202ENST00000349124 XAGE1AQ9HD64 81 aa12.21□□□□□ -0.46
PTP4A3-202ENST00000349124 COX7CP15954 63 aa12.2□□□□□ -0.46
PTP4A3-202ENST00000349124 A0A1B0GX51 115 aa12.2□□□□□ -0.46
PTP4A3-202ENST00000349124 LINC00575Q6W349 94 aa12.19□□□□□ -0.46
PTP4A3-202ENST00000349124 LELP1Q5T871 98 aa12.18□□□□□ -0.46
PTP4A3-202ENST00000349124 M0R2N4 97 aa12.18□□□□□ -0.46
PTP4A3-202ENST00000349124 SPART-AS1P0CW21 52 aa12.18□□□□□ -0.46
PTP4A3-202ENST00000349124 hADV29S1A0JD25 119 aa12.17□□□□□ -0.46
PTP4A3-202ENST00000349124 JMJD7-PLA2G4BH0Y9G9 81 aa12.17□□□□□ -0.46
PTP4A3-202ENST00000349124 IGHV4-30-4P0DP06 118 aa12.17□□□□□ -0.46
PTP4A3-202ENST00000349124 ATOX1O00244 68 aa12.16□□□□□ -0.46
PTP4A3-202ENST00000349124 FAM19A1Q7Z5A9 133 aa12.16□□□□□ -0.46
PTP4A3-202ENST00000349124 MIFP14174 115 aa12.16□□□□□ -0.46
PTP4A3-202ENST00000349124 PRR34Q9NV39 138 aa12.15□□□□□ -0.46
PTP4A3-202ENST00000349124 C6orf48Q9UBA6 75 aa12.15□□□□□ -0.47
PTP4A3-202ENST00000349124 A0A0J9YWU9 116 aa12.14□□□□□ -0.47
PTP4A3-202ENST00000349124 USP17L23D6RBM5 183 aa12.14□□□□□ -0.47
PTP4A3-202ENST00000349124 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
PTP4A3-202ENST00000349124 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
PTP4A3-202ENST00000349124 TRBV10-3A0A0K0K1G6 114 aa12.13□□□□□ -0.47
PTP4A3-202ENST00000349124 RETNQ9HD89 108 aa12.13□□□□□ -0.47
PTP4A3-202ENST00000349124 KMT2BQ9UMN6 2715 aaPredicted RBP12.13□□□□□ -0.47
PTP4A3-202ENST00000349124 IGLV6-57P01721 117 aa12.12□□□□□ -0.47
PTP4A3-202ENST00000349124 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
PTP4A3-202ENST00000349124 Q6ZQY7 126 aa12.12□□□□□ -0.47
PTP4A3-202ENST00000349124 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
PTP4A3-202ENST00000349124 TRAV23DV6A0A075B6W5 121 aa12.1□□□□□ -0.47
PTP4A3-202ENST00000349124 RBM3P98179 157 aaKnown RBP12.1□□□□□ -0.47
PTP4A3-202ENST00000349124 LOC107984640A0A0U1RRK4 108 aa12.1□□□□□ -0.47
PTP4A3-202ENST00000349124 ANK2Q01484 3957 aa12.09□□□□□ -0.47
PTP4A3-202ENST00000349124 CRYGAP11844 174 aa12.09□□□□□ -0.47
PTP4A3-202ENST00000349124 TENM3Q9P273 2699 aa12.09□□□□□ -0.47
PTP4A3-202ENST00000349124 Q6ZQT0 140 aa12.09□□□□□ -0.47
PTP4A3-202ENST00000349124 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
PTP4A3-202ENST00000349124 OXLD1Q5BKU9 147 aa12.06□□□□□ -0.48
PTP4A3-202ENST00000349124 ZNF561-AS1K7EIQ3 104 aa12.05□□□□□ -0.48
PTP4A3-202ENST00000349124 UPK3BQ9BT76 320 aa12.05□□□□□ -0.48
PTP4A3-202ENST00000349124 UBL5Q9BZL1 73 aa12.05□□□□□ -0.48
PTP4A3-202ENST00000349124 KPRPQ5T749 579 aaPredicted RBP12.04□□□□□ -0.48
PTP4A3-202ENST00000349124 CAMK2N2Q96S95 79 aa12.03□□□□□ -0.48
PTP4A3-202ENST00000349124 GVQW2A0A096LPI5 108 aaPredicted RBP12.02□□□□□ -0.48
PTP4A3-202ENST00000349124 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
PTP4A3-202ENST00000349124 GHRHP01286 108 aa12.02□□□□□ -0.49
PTP4A3-202ENST00000349124 Q6ZRU5 148 aa12.02□□□□□ -0.49
PTP4A3-202ENST00000349124 Q6ZTC4 211 aa12.02□□□□□ -0.49
PTP4A3-202ENST00000349124 DIRC1Q969H9 104 aa12.02□□□□□ -0.49
PTP4A3-202ENST00000349124 HAMPP81172 84 aa12.01□□□□□ -0.49
PTP4A3-202ENST00000349124 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
PTP4A3-202ENST00000349124 DSCR8Q96T75 97 aa12□□□□□ -0.49
PTP4A3-202ENST00000349124 VPREB1P12018 145 aa11.99□□□□□ -0.49
PTP4A3-202ENST00000349124 LOC110117498A0A087WWA1 95 aa11.99□□□□□ -0.49
PTP4A3-202ENST00000349124 MAST4O15021 2626 aa11.98□□□□□ -0.49
PTP4A3-202ENST00000349124 KRTAP10-11P60412 298 aa11.98□□□□□ -0.49
PTP4A3-202ENST00000349124 ESRGQ1W209 222 aa11.98□□□□□ -0.49
PTP4A3-202ENST00000349124 STAB1Q9NY15 2570 aa11.98□□□□□ -0.49
PTP4A3-202ENST00000349124 Q6ZVQ6 151 aa11.98□□□□□ -0.49
PTP4A3-202ENST00000349124 C15orf56Q8N910 161 aa11.98□□□□□ -0.49
PTP4A3-202ENST00000349124 MUC7Q8TAX7 377 aa11.98□□□□□ -0.49
PTP4A3-202ENST00000349124 COX7BP24311 80 aa11.97□□□□□ -0.49
PTP4A3-202ENST00000349124 LINC01547P58512 204 aaPredicted RBP11.97□□□□□ -0.49
PTP4A3-202ENST00000349124 ATP5EP2Q5VTU8 51 aa11.97□□□□□ -0.49
PTP4A3-202ENST00000349124 FLNBO75369 2602 aaKnown RBP11.96□□□□□ -0.49
PTP4A3-202ENST00000349124 SCXQ7RTU7 201 aa11.96□□□□□ -0.49
PTP4A3-202ENST00000349124 NOTCH1P46531 2555 aa11.95□□□□□ -0.5
PTP4A3-202ENST00000349124 ELOF1P60002 83 aaKnown RBP11.94□□□□□ -0.5
PTP4A3-202ENST00000349124 Q6ZRP5 223 aa11.94□□□□□ -0.5
PTP4A3-202ENST00000349124 FBN1P35555 2871 aaKnown RBP11.93□□□□□ -0.5
PTP4A3-202ENST00000349124 TRAV10A0A0B4J240 114 aa11.93□□□□□ -0.5
PTP4A3-202ENST00000349124 EGFEM1PQ0D2K5 195 aa11.92□□□□□ -0.5
PTP4A3-202ENST00000349124 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
PTP4A3-202ENST00000349124 C20orf197Q8N268 126 aa11.91□□□□□ -0.5
PTP4A3-202ENST00000349124 F8P00451 2351 aa11.91□□□□□ -0.5
PTP4A3-202ENST00000349124 WIPF1O43516 503 aa11.91□□□□□ -0.5
PTP4A3-202ENST00000349124 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.91□□□□□ -0.5
PTP4A3-202ENST00000349124 NDUFC2-KCTD14E9PQ53 114 aa11.9□□□□□ -0.5
PTP4A3-202ENST00000349124 M0R378 163 aa11.9□□□□□ -0.5
PTP4A3-202ENST00000349124 TRBV7-4A0A0J9YYF1 115 aa11.89□□□□□ -0.51
PTP4A3-202ENST00000349124 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
PTP4A3-202ENST00000349124 J3KT08 172 aa11.88□□□□□ -0.51
PTP4A3-202ENST00000349124 FAM19A5Q7Z5A7 132 aaPredicted RBP11.88□□□□□ -0.51
PTP4A3-202ENST00000349124 C1orf43Q9BWL3 253 aa11.88□□□□□ -0.51
PTP4A3-202ENST00000349124 OXTP01178 125 aa11.88□□□□□ -0.51
PTP4A3-202ENST00000349124 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
PTP4A3-202ENST00000349124 TMEM258P61165 79 aa11.86□□□□□ -0.51
PTP4A3-202ENST00000349124 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
PTP4A3-202ENST00000349124 DEFB105AQ8NG35 78 aa11.85□□□□□ -0.51
PTP4A3-202ENST00000349124 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
PTP4A3-202ENST00000349124 H3BNG1 76 aa11.84□□□□□ -0.51
PTP4A3-202ENST00000349124 PDE6GP18545 87 aa11.84□□□□□ -0.51
PTP4A3-202ENST00000349124 Q8N9L7 120 aa11.83□□□□□ -0.52
PTP4A3-202ENST00000349124 SYCNQ0VAF6 134 aa11.83□□□□□ -0.52
PTP4A3-202ENST00000349124 CMYA5Q8N3K9 4069 aa11.83□□□□□ -0.52
PTP4A3-202ENST00000349124 TRBV7-6A0A0J9YX20 115 aa11.81□□□□□ -0.52
PTP4A3-202ENST00000349124 CASC10Q5T4H9 136 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms