RNA–Protein interactions for RNA: ENST00000348333.7

TNFRSF25-201, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-201ENST00000348333 FAM19A2Q8N3H0 131 aa13.37□□□□□ -0.27
TNFRSF25-201ENST00000348333 TRAV12-1A0A0B4J245 112 aa13.36□□□□□ -0.27
TNFRSF25-201ENST00000348333 TMEM126AQ9H061 195 aa13.36□□□□□ -0.27
TNFRSF25-201ENST00000348333 CRYGAP11844 174 aa13.35□□□□□ -0.27
TNFRSF25-201ENST00000348333 TYMSOSQ8TAI1 123 aa13.35□□□□□ -0.27
TNFRSF25-201ENST00000348333 M0R378 163 aa13.34□□□□□ -0.27
TNFRSF25-201ENST00000348333 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
TNFRSF25-201ENST00000348333 LINC00158P58513 81 aa13.33□□□□□ -0.28
TNFRSF25-201ENST00000348333 RPL24P83731 157 aaKnown RBP13.33□□□□□ -0.28
TNFRSF25-201ENST00000348333 LINC00310P59036 64 aa13.32□□□□□ -0.28
TNFRSF25-201ENST00000348333 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
TNFRSF25-201ENST00000348333 HSBP1O75506 76 aa13.3□□□□□ -0.28
TNFRSF25-201ENST00000348333 TRGC2P03986 189 aa13.3□□□□□ -0.28
TNFRSF25-201ENST00000348333 H0Y8G0 127 aa13.29□□□□□ -0.28
TNFRSF25-201ENST00000348333 SMIM13P0DJ93 91 aa13.29□□□□□ -0.28
TNFRSF25-201ENST00000348333 FAM229BQ4G0N7 80 aa13.26□□□□□ -0.29
TNFRSF25-201ENST00000348333 SERF1AO75920 110 aa13.25□□□□□ -0.29
TNFRSF25-201ENST00000348333 TSPEAR-AS2P59090 65 aa13.25□□□□□ -0.29
TNFRSF25-201ENST00000348333 MEIG1Q5JSS6 88 aa13.24□□□□□ -0.29
TNFRSF25-201ENST00000348333 SLC7A5P1Q8MH63 180 aa13.24□□□□□ -0.29
TNFRSF25-201ENST00000348333 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
TNFRSF25-201ENST00000348333 NCR3O14931 201 aa13.23□□□□□ -0.29
TNFRSF25-201ENST00000348333 PLEKHB2Q96CS7 222 aa13.23□□□□□ -0.29
TNFRSF25-201ENST00000348333 BOD1L2Q8IYS8 172 aa13.22□□□□□ -0.29
TNFRSF25-201ENST00000348333 HIGD2AQ9BW72 106 aa13.22□□□□□ -0.29
TNFRSF25-201ENST00000348333 NDUFA12Q9UI09 145 aa13.22□□□□□ -0.29
TNFRSF25-201ENST00000348333 RETNLBQ9BQ08 111 aa13.21□□□□□ -0.29
TNFRSF25-201ENST00000348333 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
TNFRSF25-201ENST00000348333 C3orf22Q8N5N4 141 aa13.2□□□□□ -0.3
TNFRSF25-201ENST00000348333 LINC00304Q8N9R0 145 aa13.2□□□□□ -0.3
TNFRSF25-201ENST00000348333 ATP6V1G1O75348 118 aa13.19□□□□□ -0.3
TNFRSF25-201ENST00000348333 HERV-K104P63124 156 aa13.19□□□□□ -0.3
TNFRSF25-201ENST00000348333 PMCHL2Q9BQD1 86 aa13.19□□□□□ -0.3
TNFRSF25-201ENST00000348333 IGKV2D-26A0A0A0MRZ7 120 aa13.18□□□□□ -0.3
TNFRSF25-201ENST00000348333 FABP4P15090 132 aa13.17□□□□□ -0.3
TNFRSF25-201ENST00000348333 DAND5Q8N907 189 aa13.17□□□□□ -0.3
TNFRSF25-201ENST00000348333 COLCA2A8K830 154 aa13.16□□□□□ -0.3
TNFRSF25-201ENST00000348333 MYMXA0A1B0GTQ4 84 aa13.15□□□□□ -0.3
TNFRSF25-201ENST00000348333 LEPROTO15243 131 aa13.15□□□□□ -0.3
TNFRSF25-201ENST00000348333 PRYO14603 147 aa13.14□□□□□ -0.31
TNFRSF25-201ENST00000348333 SPRR4Q96PI1 79 aa13.14□□□□□ -0.31
TNFRSF25-201ENST00000348333 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
TNFRSF25-201ENST00000348333 SPRR1AP35321 89 aa13.13□□□□□ -0.31
TNFRSF25-201ENST00000348333 KRTAP4-16G5E9R7 235 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF25-201ENST00000348333 KCNQ1DNQ9H478 68 aa13.12□□□□□ -0.31
TNFRSF25-201ENST00000348333 MUC2Q02817 5179 aa13.11□□□□□ -0.31
TNFRSF25-201ENST00000348333 PLNP26678 52 aa13.11□□□□□ -0.31
TNFRSF25-201ENST00000348333 J3QQQ9 107 aa13.1□□□□□ -0.31
TNFRSF25-201ENST00000348333 DPM2O94777 84 aa13.1□□□□□ -0.31
TNFRSF25-201ENST00000348333 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
TNFRSF25-201ENST00000348333 HSPB8Q9UJY1 196 aa13.1□□□□□ -0.31
TNFRSF25-201ENST00000348333 MAP1LC3CQ9BXW4 147 aa13.09□□□□□ -0.31
TNFRSF25-201ENST00000348333 LINC00587B1AMM8 73 aa13.08□□□□□ -0.32
TNFRSF25-201ENST00000348333 SMCR5Q8TEV8 140 aa13.08□□□□□ -0.32
TNFRSF25-201ENST00000348333 IGKCP01834 107 aa13.07□□□□□ -0.32
TNFRSF25-201ENST00000348333 PPDPFQ9H3Y8 114 aa13.06□□□□□ -0.32
TNFRSF25-201ENST00000348333 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
TNFRSF25-201ENST00000348333 ETDCA0A1B0GVM5 59 aa13.05□□□□□ -0.32
TNFRSF25-201ENST00000348333 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
TNFRSF25-201ENST00000348333 EIF4EBP3O60516 100 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF25-201ENST00000348333 LGALS3P17931 250 aaKnown RBP13.04□□□□□ -0.32
TNFRSF25-201ENST00000348333 HERVK_113P61574 105 aa13.04□□□□□ -0.32
TNFRSF25-201ENST00000348333 ZNF706Q9Y5V0 76 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF25-201ENST00000348333 B5MCH6 92 aa13.02□□□□□ -0.33
TNFRSF25-201ENST00000348333 ERC2-IT1O76042 136 aa13.02□□□□□ -0.33
TNFRSF25-201ENST00000348333 SOSTDC1Q6X4U4 206 aa13.02□□□□□ -0.33
TNFRSF25-201ENST00000348333 DDTP30046 118 aa13.01□□□□□ -0.33
TNFRSF25-201ENST00000348333 NPC2P61916 151 aa13.01□□□□□ -0.33
TNFRSF25-201ENST00000348333 NMUP48645 174 aa13□□□□□ -0.33
TNFRSF25-201ENST00000348333 ADAMTSL4-AS1Q5T5F5 129 aa13□□□□□ -0.33
TNFRSF25-201ENST00000348333 IGLV7-46A0A075B6I9 117 aa12.99□□□□□ -0.33
TNFRSF25-201ENST00000348333 TRBV10-2A0A0K0K1G8 114 aa12.99□□□□□ -0.33
TNFRSF25-201ENST00000348333 Q8NBF4 154 aa12.99□□□□□ -0.33
TNFRSF25-201ENST00000348333 A0A0J9YXY3 114 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BKO60814 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BJP06899 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BOP23527 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BBP33778 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BDP58876 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BCP62807 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST2H2BEQ16778 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BHQ93079 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BNQ99877 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 HIST1H2BMQ99879 126 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 Q9BRP9 147 aa12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 SPANXB1Q9NS25 103 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF25-201ENST00000348333 E9PLD3 99 aa12.97□□□□□ -0.33
TNFRSF25-201ENST00000348333 LINC00483Q53H64 154 aa12.97□□□□□ -0.33
TNFRSF25-201ENST00000348333 MIEN1Q9BRT3 115 aa12.97□□□□□ -0.33
TNFRSF25-201ENST00000348333 TPRXLQ17RH7 258 aa12.96□□□□□ -0.33
TNFRSF25-201ENST00000348333 GAGE2AQ6NT46 116 aa12.96□□□□□ -0.33
TNFRSF25-201ENST00000348333 SYS1-DBNDD2H3BUS1 97 aa12.95□□□□□ -0.34
TNFRSF25-201ENST00000348333 IGLV6-57P01721 117 aa12.95□□□□□ -0.34
TNFRSF25-201ENST00000348333 CTAG1AP78358 180 aa12.95□□□□□ -0.34
TNFRSF25-201ENST00000348333 NDUFC2O95298 119 aa12.94□□□□□ -0.34
TNFRSF25-201ENST00000348333 SPAG11AQ6PDA7 123 aa12.94□□□□□ -0.34
TNFRSF25-201ENST00000348333 Q6ZRX8 168 aa12.94□□□□□ -0.34
TNFRSF25-201ENST00000348333 S100A12P80511 92 aa12.93□□□□□ -0.34
TNFRSF25-201ENST00000348333 MUC17Q685J3 4493 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms