RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 EDN2P20800 178 aa8.46□□□□□ -1.06
TRAF3-201ENST00000347662 C8orf87E5RJ46 101 aa8.45□□□□□ -1.06
TRAF3-201ENST00000347662 A8MTW9 85 aa8.45□□□□□ -1.06
TRAF3-201ENST00000347662 MUC7Q8TAX7 377 aa8.44□□□□□ -1.06
TRAF3-201ENST00000347662 Q8N6K4 173 aa8.44□□□□□ -1.06
TRAF3-201ENST00000347662 SMCR5Q8TEV8 140 aa8.44□□□□□ -1.06
TRAF3-201ENST00000347662 LAMA2P24043 3122 aaKnown RBP8.44□□□□□ -1.06
TRAF3-201ENST00000347662 LINC00313P59037 77 aa8.44□□□□□ -1.06
TRAF3-201ENST00000347662 EIF4EBP1Q13541 118 aaPredicted RBP8.44□□□□□ -1.06
TRAF3-201ENST00000347662 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
TRAF3-201ENST00000347662 YPEL4Q96NS1 127 aa8.44□□□□□ -1.06
TRAF3-201ENST00000347662 C10orf142B7Z368 130 aa8.43□□□□□ -1.06
TRAF3-201ENST00000347662 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
TRAF3-201ENST00000347662 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
TRAF3-201ENST00000347662 Q96NJ1 140 aa8.42□□□□□ -1.06
TRAF3-201ENST00000347662 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
TRAF3-201ENST00000347662 C11orf1Q9H5F2 150 aa8.41□□□□□ -1.06
TRAF3-201ENST00000347662 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.06
TRAF3-201ENST00000347662 CXCL6P80162 114 aa8.4□□□□□ -1.06
TRAF3-201ENST00000347662 CHTF8P0CG12 524 aa8.4□□□□□ -1.06
TRAF3-201ENST00000347662 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
TRAF3-201ENST00000347662 C16orf90A8MZG2 172 aa8.4□□□□□ -1.07
TRAF3-201ENST00000347662 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
TRAF3-201ENST00000347662 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
TRAF3-201ENST00000347662 PRR9Q5T870 116 aa8.39□□□□□ -1.07
TRAF3-201ENST00000347662 HELZ2Q9BYK8 2649 aaKnown RBP8.38□□□□□ -1.07
TRAF3-201ENST00000347662 C22orf24Q9Y442 160 aa8.38□□□□□ -1.07
TRAF3-201ENST00000347662 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
TRAF3-201ENST00000347662 CFAP54Q96N23 3096 aa8.36□□□□□ -1.07
TRAF3-201ENST00000347662 KIAA0087Q14695 138 aa8.35□□□□□ -1.07
TRAF3-201ENST00000347662 Q6ZRU5 148 aa8.35□□□□□ -1.07
TRAF3-201ENST00000347662 XIRP2A4UGR9 3374 aa8.35□□□□□ -1.07
TRAF3-201ENST00000347662 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
TRAF3-201ENST00000347662 LINC01554Q52M75 96 aa8.35□□□□□ -1.07
TRAF3-201ENST00000347662 Q8N2B8 174 aa8.35□□□□□ -1.07
TRAF3-201ENST00000347662 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-201ENST00000347662 SMIM1B2RUZ4 78 aa8.33□□□□□ -1.08
TRAF3-201ENST00000347662 LYPD5Q6UWN5 251 aa8.33□□□□□ -1.08
TRAF3-201ENST00000347662 IGLV1-51P01701 117 aa8.33□□□□□ -1.08
TRAF3-201ENST00000347662 CHCHD7Q9BUK0 85 aa8.33□□□□□ -1.08
TRAF3-201ENST00000347662 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
TRAF3-201ENST00000347662 KLLNB2CW77 178 aa8.32□□□□□ -1.08
TRAF3-201ENST00000347662 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
TRAF3-201ENST00000347662 C2orf91Q6ZV80 131 aa8.31□□□□□ -1.08
TRAF3-201ENST00000347662 C11orf21Q9P2W6 132 aa8.31□□□□□ -1.08
TRAF3-201ENST00000347662 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
TRAF3-201ENST00000347662 F8WDY8 70 aa8.31□□□□□ -1.08
TRAF3-201ENST00000347662 POLR2KP53803 58 aaKnown RBP8.3□□□□□ -1.08
TRAF3-201ENST00000347662 SETXQ7Z333 2677 aaKnown RBP8.3□□□□□ -1.08
TRAF3-201ENST00000347662 TRAV22A0A0B4J277 110 aa8.3□□□□□ -1.08
TRAF3-201ENST00000347662 COL27A1Q8IZC6 1860 aaPredicted RBP8.29□□□□□ -1.08
TRAF3-201ENST00000347662 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
TRAF3-201ENST00000347662 AKAP13Q12802 2813 aa8.28□□□□□ -1.08
TRAF3-201ENST00000347662 EPM2AB3EWF7 344 aa8.27□□□□□ -1.08
TRAF3-201ENST00000347662 PHF5AQ7RTV0 110 aaKnown RBP8.27□□□□□ -1.08
TRAF3-201ENST00000347662 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
TRAF3-201ENST00000347662 IGLV6-57P01721 117 aa8.27□□□□□ -1.09
TRAF3-201ENST00000347662 C16orf95Q9H693 158 aa8.27□□□□□ -1.09
TRAF3-201ENST00000347662 ITPR3Q14573 2671 aa8.27□□□□□ -1.09
TRAF3-201ENST00000347662 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
TRAF3-201ENST00000347662 PCSK5Q92824 1860 aa8.27□□□□□ -1.09
TRAF3-201ENST00000347662 LINC00846Q9NV44 126 aa8.26□□□□□ -1.09
TRAF3-201ENST00000347662 LUZP6Q538Z0 58 aa8.26□□□□□ -1.09
TRAF3-201ENST00000347662 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
TRAF3-201ENST00000347662 FHL3Q13643 280 aa8.25□□□□□ -1.09
TRAF3-201ENST00000347662 CDIP1Q9H305 208 aa8.25□□□□□ -1.09
TRAF3-201ENST00000347662 FLNAP21333 2647 aaKnown RBP8.25□□□□□ -1.09
TRAF3-201ENST00000347662 TEP1Q99973 2627 aaKnown RBP8.25□□□□□ -1.09
TRAF3-201ENST00000347662 WDFY4Q6ZS81 3184 aa8.25□□□□□ -1.09
TRAF3-201ENST00000347662 RTL8CO15255 209 aa8.25□□□□□ -1.09
TRAF3-201ENST00000347662 C4orf26Q17RF5 130 aa8.24□□□□□ -1.09
TRAF3-201ENST00000347662 ZNF580Q9UK33 172 aa8.24□□□□□ -1.09
TRAF3-201ENST00000347662 C9orf92A6NGG3 77 aa8.24□□□□□ -1.09
TRAF3-201ENST00000347662 PRO0628Q9UI54 55 aa8.24□□□□□ -1.09
TRAF3-201ENST00000347662 HTTP42858 3142 aa8.23□□□□□ -1.09
TRAF3-201ENST00000347662 Q6ZRP5 223 aa8.23□□□□□ -1.09
TRAF3-201ENST00000347662 A0A0D9SG42 100 aa8.22□□□□□ -1.09
TRAF3-201ENST00000347662 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
TRAF3-201ENST00000347662 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
TRAF3-201ENST00000347662 MGAQ8IWI9 3026 aa8.21□□□□□ -1.09
TRAF3-201ENST00000347662 SPATA3Q8NHX4 192 aa8.21□□□□□ -1.09
TRAF3-201ENST00000347662 Q8NBF4 154 aa8.21□□□□□ -1.1
TRAF3-201ENST00000347662 KRTAP24-1Q3LI83 254 aa8.2□□□□□ -1.1
TRAF3-201ENST00000347662 Q6ZSN1 163 aa8.2□□□□□ -1.1
TRAF3-201ENST00000347662 CSNK1G2-AS1Q8NCQ2 148 aa8.2□□□□□ -1.1
TRAF3-201ENST00000347662 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
TRAF3-201ENST00000347662 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
TRAF3-201ENST00000347662 LINC00476Q8WZB0 136 aa8.18□□□□□ -1.1
TRAF3-201ENST00000347662 KIF25-AS1Q9Y6Z4 181 aa8.17□□□□□ -1.1
TRAF3-201ENST00000347662 UNC80Q8N2C7 3258 aa8.17□□□□□ -1.1
TRAF3-201ENST00000347662 MAP1AP78559 2803 aaPredicted RBP8.17□□□□□ -1.1
TRAF3-201ENST00000347662 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
TRAF3-201ENST00000347662 ZNF575Q86XF7 245 aa8.16□□□□□ -1.1
TRAF3-201ENST00000347662 UQCR11O14957 56 aa8.16□□□□□ -1.1
TRAF3-201ENST00000347662 COL4A2P08572 1712 aa8.15□□□□□ -1.1
TRAF3-201ENST00000347662 Q6ZQT0 140 aa8.15□□□□□ -1.11
TRAF3-201ENST00000347662 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
TRAF3-201ENST00000347662 TRIOO75962 3097 aa8.14□□□□□ -1.11
TRAF3-201ENST00000347662 LINC00315P59091 139 aa8.14□□□□□ -1.11
TRAF3-201ENST00000347662 TEX15Q9BXT5 2789 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms