RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SCXQ7RTU7 201 aa7.63□□□□□ -1.19
CLCN6-202ENST00000346436 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
CLCN6-202ENST00000346436 Q8N9L7 120 aa7.63□□□□□ -1.19
CLCN6-202ENST00000346436 AKAP13Q12802 2813 aa7.62□□□□□ -1.19
CLCN6-202ENST00000346436 CRYGAP11844 174 aa7.62□□□□□ -1.19
CLCN6-202ENST00000346436 A0A087WYN8 130 aa7.62□□□□□ -1.19
CLCN6-202ENST00000346436 ENHOQ6UWT2 76 aa7.62□□□□□ -1.19
CLCN6-202ENST00000346436 CSDC2Q9Y534 153 aaKnown RBP7.62□□□□□ -1.19
CLCN6-202ENST00000346436 RPL37AP61513 92 aaKnown RBP7.61□□□□□ -1.19
CLCN6-202ENST00000346436 WDFY3Q8IZQ1 3526 aa7.61□□□□□ -1.19
CLCN6-202ENST00000346436 J3KT08 172 aa7.6□□□□□ -1.19
CLCN6-202ENST00000346436 Q9BRP9 147 aa7.6□□□□□ -1.19
CLCN6-202ENST00000346436 C11orf72Q8NBR9 251 aa7.6□□□□□ -1.19
CLCN6-202ENST00000346436 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
CLCN6-202ENST00000346436 CELA1Q9UNI1 258 aa7.6□□□□□ -1.19
CLCN6-202ENST00000346436 F8P00451 2351 aa7.59□□□□□ -1.19
CLCN6-202ENST00000346436 MUC4Q99102 2169 aa7.59□□□□□ -1.19
CLCN6-202ENST00000346436 MAP1AP78559 2803 aaPredicted RBP7.59□□□□□ -1.19
CLCN6-202ENST00000346436 ESRGQ1W209 222 aa7.59□□□□□ -1.2
CLCN6-202ENST00000346436 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
CLCN6-202ENST00000346436 A0A087WVE0 104 aa7.58□□□□□ -1.2
CLCN6-202ENST00000346436 Q6Q795 121 aa7.57□□□□□ -1.2
CLCN6-202ENST00000346436 WFDC13Q8IUB5 93 aa7.57□□□□□ -1.2
CLCN6-202ENST00000346436 UQCRQO14949 82 aa7.57□□□□□ -1.2
CLCN6-202ENST00000346436 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
CLCN6-202ENST00000346436 ZNF575Q86XF7 245 aa7.56□□□□□ -1.2
CLCN6-202ENST00000346436 TYMSOSQ8TAI1 123 aa7.56□□□□□ -1.2
CLCN6-202ENST00000346436 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
CLCN6-202ENST00000346436 CENPEQ02224 2701 aa7.55□□□□□ -1.2
CLCN6-202ENST00000346436 ADGRG4Q8IZF6 3080 aa7.55□□□□□ -1.2
CLCN6-202ENST00000346436 PRR4Q16378 134 aa7.55□□□□□ -1.2
CLCN6-202ENST00000346436 IGHV6-1A0A0B4J1U7 121 aa7.54□□□□□ -1.2
CLCN6-202ENST00000346436 K7EIL1 84 aa7.54□□□□□ -1.2
CLCN6-202ENST00000346436 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
CLCN6-202ENST00000346436 ZNF292O60281 2723 aa7.54□□□□□ -1.2
CLCN6-202ENST00000346436 A8MTW9 85 aa7.54□□□□□ -1.2
CLCN6-202ENST00000346436 COX6B2Q6YFQ2 88 aa7.54□□□□□ -1.2
CLCN6-202ENST00000346436 Q6ZRU5 148 aa7.53□□□□□ -1.2
CLCN6-202ENST00000346436 LOC400499M0QZD8 3231 aa7.53□□□□□ -1.2
CLCN6-202ENST00000346436 C22orf24Q9Y442 160 aa7.53□□□□□ -1.2
CLCN6-202ENST00000346436 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.2
CLCN6-202ENST00000346436 SPACA4Q8TDM5 124 aa7.52□□□□□ -1.2
CLCN6-202ENST00000346436 EPG5Q9HCE0 2579 aa7.52□□□□□ -1.21
CLCN6-202ENST00000346436 KLK9Q2XQG4 91 aa7.52□□□□□ -1.21
CLCN6-202ENST00000346436 FAM218AQ96MZ4 157 aa7.52□□□□□ -1.21
CLCN6-202ENST00000346436 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
CLCN6-202ENST00000346436 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
CLCN6-202ENST00000346436 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
CLCN6-202ENST00000346436 IGLV5-39A0A0G2JS06 123 aa7.51□□□□□ -1.21
CLCN6-202ENST00000346436 NDUFC2O95298 119 aa7.51□□□□□ -1.21
CLCN6-202ENST00000346436 X6R8D5 127 aa7.51□□□□□ -1.21
CLCN6-202ENST00000346436 KALRNO60229 2985 aa7.51□□□□□ -1.21
CLCN6-202ENST00000346436 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
CLCN6-202ENST00000346436 IMUPQ9GZP8 106 aa7.5□□□□□ -1.21
CLCN6-202ENST00000346436 LITAFQ99732 161 aa7.5□□□□□ -1.21
CLCN6-202ENST00000346436 LINC00588Q9Y4M8 146 aa7.49□□□□□ -1.21
CLCN6-202ENST00000346436 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
CLCN6-202ENST00000346436 COX7CP15954 63 aa7.49□□□□□ -1.21
CLCN6-202ENST00000346436 Q8N814 137 aa7.49□□□□□ -1.21
CLCN6-202ENST00000346436 FLNBO75369 2602 aaKnown RBP7.49□□□□□ -1.21
CLCN6-202ENST00000346436 PRLHP81277 87 aa7.48□□□□□ -1.21
CLCN6-202ENST00000346436 Q8N3U1 123 aa7.48□□□□□ -1.21
CLCN6-202ENST00000346436 Q8NAQ8 132 aa7.48□□□□□ -1.21
CLCN6-202ENST00000346436 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
CLCN6-202ENST00000346436 LINC00846Q9NV44 126 aa7.48□□□□□ -1.21
CLCN6-202ENST00000346436 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
CLCN6-202ENST00000346436 CFAP47Q6ZTR5 3102 aa7.47□□□□□ -1.21
CLCN6-202ENST00000346436 IGHV3OR16-9A0A0B4J2B5 98 aa7.46□□□□□ -1.22
CLCN6-202ENST00000346436 IGLV5-45A0A087WSX0 123 aa7.45□□□□□ -1.22
CLCN6-202ENST00000346436 Q8NBF4 154 aa7.45□□□□□ -1.22
CLCN6-202ENST00000346436 LRBAP50851 2863 aa7.45□□□□□ -1.22
CLCN6-202ENST00000346436 A0A087WSZ3 146 aa7.44□□□□□ -1.22
CLCN6-202ENST00000346436 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
CLCN6-202ENST00000346436 EPM2AB3EWF7 344 aa7.44□□□□□ -1.22
CLCN6-202ENST00000346436 MOBPQ13875 183 aa7.44□□□□□ -1.22
CLCN6-202ENST00000346436 V9GYY9 64 aa7.44□□□□□ -1.22
CLCN6-202ENST00000346436 DNAH10OSP0CZ25 163 aa7.44□□□□□ -1.22
CLCN6-202ENST00000346436 TACC2O95359 2948 aa7.43□□□□□ -1.22
CLCN6-202ENST00000346436 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
CLCN6-202ENST00000346436 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
CLCN6-202ENST00000346436 DMXL2Q8TDJ6 3036 aa7.42□□□□□ -1.22
CLCN6-202ENST00000346436 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
CLCN6-202ENST00000346436 ATMQ13315 3056 aa7.41□□□□□ -1.22
CLCN6-202ENST00000346436 MPLKIPQ8TAP9 179 aa7.41□□□□□ -1.22
CLCN6-202ENST00000346436 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
CLCN6-202ENST00000346436 LINC00167Q96N53 147 aa7.4□□□□□ -1.22
CLCN6-202ENST00000346436 TM2D3Q9BRN9 247 aa7.4□□□□□ -1.22
CLCN6-202ENST00000346436 NDUFC1O43677 76 aa7.4□□□□□ -1.22
CLCN6-202ENST00000346436 DMDP11532 3685 aa7.4□□□□□ -1.22
CLCN6-202ENST00000346436 TRBV7-7A0A0K0K1E9 115 aa7.4□□□□□ -1.23
CLCN6-202ENST00000346436 KRTAP10-11P60412 298 aa7.39□□□□□ -1.23
CLCN6-202ENST00000346436 TNRC18O15417 2968 aaPredicted RBP7.39□□□□□ -1.23
CLCN6-202ENST00000346436 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
CLCN6-202ENST00000346436 BCE1O60756 84 aa7.38□□□□□ -1.23
CLCN6-202ENST00000346436 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
CLCN6-202ENST00000346436 DMXL1Q9Y485 3027 aa7.37□□□□□ -1.23
CLCN6-202ENST00000346436 ZFHX4Q86UP3 3567 aa7.37□□□□□ -1.23
CLCN6-202ENST00000346436 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
CLCN6-202ENST00000346436 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
CLCN6-202ENST00000346436 IGKV2D-30A0A075B6S6 120 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms