RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 J3QQQ9 107 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
SNCA-202ENST00000345009 LGALS3P17931 250 aaKnown RBP7.51□□□□□ -1.21
SNCA-202ENST00000345009 NMUP48645 174 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 Q8N1X5 172 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 C7orf33Q8WU49 177 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 KRTAP9-7A8MTY7 169 aa7.5□□□□□ -1.21
SNCA-202ENST00000345009 EPM2AB3EWF7 344 aa7.5□□□□□ -1.21
SNCA-202ENST00000345009 PFN2P35080 140 aa7.5□□□□□ -1.21
SNCA-202ENST00000345009 ZNF625Q96I27 306 aaPredicted RBP7.5□□□□□ -1.21
SNCA-202ENST00000345009 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
SNCA-202ENST00000345009 APOBP04114 4563 aaKnown RBP7.49□□□□□ -1.21
SNCA-202ENST00000345009 E9PLD3 99 aa7.49□□□□□ -1.21
SNCA-202ENST00000345009 LINC00158P58513 81 aa7.49□□□□□ -1.21
SNCA-202ENST00000345009 HSBP1L1C9JCN9 74 aa7.48□□□□□ -1.21
SNCA-202ENST00000345009 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
SNCA-202ENST00000345009 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
SNCA-202ENST00000345009 CDIP1Q9H305 208 aa7.47□□□□□ -1.21
SNCA-202ENST00000345009 XAGE1AQ9HD64 81 aa7.47□□□□□ -1.21
SNCA-202ENST00000345009 Q5VSD8 79 aa7.46□□□□□ -1.22
SNCA-202ENST00000345009 DNAH8Q96JB1 4490 aa7.46□□□□□ -1.22
SNCA-202ENST00000345009 HSPG2P98160 4391 aa7.45□□□□□ -1.22
SNCA-202ENST00000345009 A0A1W2PNN7 141 aa7.45□□□□□ -1.22
SNCA-202ENST00000345009 SCGB1D1O95968 90 aa7.45□□□□□ -1.22
SNCA-202ENST00000345009 LBHQ53QV2 105 aaPredicted RBP7.45□□□□□ -1.22
SNCA-202ENST00000345009 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
SNCA-202ENST00000345009 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
SNCA-202ENST00000345009 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
SNCA-202ENST00000345009 HERC2O95714 4834 aa7.44□□□□□ -1.22
SNCA-202ENST00000345009 SMIM13P0DJ93 91 aa7.44□□□□□ -1.22
SNCA-202ENST00000345009 TSPEAR-AS2P59090 65 aa7.44□□□□□ -1.22
SNCA-202ENST00000345009 RPL37AP61513 92 aaKnown RBP7.44□□□□□ -1.22
SNCA-202ENST00000345009 RPL24P83731 157 aaKnown RBP7.44□□□□□ -1.22
SNCA-202ENST00000345009 SND1-IT1Q9HBX3 110 aa7.44□□□□□ -1.22
SNCA-202ENST00000345009 FAM168BA1KXE4 195 aa7.43□□□□□ -1.22
SNCA-202ENST00000345009 ATOH7Q8N100 152 aa7.43□□□□□ -1.22
SNCA-202ENST00000345009 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
SNCA-202ENST00000345009 ZNF815PA8K554 130 aa7.42□□□□□ -1.22
SNCA-202ENST00000345009 M0QXV9 152 aa7.42□□□□□ -1.22
SNCA-202ENST00000345009 NKAPP1Q8N9T2 125 aa7.42□□□□□ -1.22
SNCA-202ENST00000345009 TP73-AS1Q9UF72 201 aa7.42□□□□□ -1.22
SNCA-202ENST00000345009 UBE2BP63146 152 aa7.41□□□□□ -1.22
SNCA-202ENST00000345009 MIR7-3HGQ8N6C7 128 aa7.41□□□□□ -1.22
SNCA-202ENST00000345009 MIEN1Q9BRT3 115 aa7.41□□□□□ -1.22
SNCA-202ENST00000345009 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
SNCA-202ENST00000345009 PHF5AQ7RTV0 110 aaKnown RBP7.4□□□□□ -1.22
SNCA-202ENST00000345009 IGKV2D-26A0A0A0MRZ7 120 aa7.39□□□□□ -1.23
SNCA-202ENST00000345009 A0A0J9YXY3 114 aa7.39□□□□□ -1.23
SNCA-202ENST00000345009 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
SNCA-202ENST00000345009 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
SNCA-202ENST00000345009 MRPL55Q7Z7F7 128 aaKnown RBP7.39□□□□□ -1.23
SNCA-202ENST00000345009 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
SNCA-202ENST00000345009 TIMM17BO60830 172 aa7.38□□□□□ -1.23
SNCA-202ENST00000345009 PCP4P48539 62 aa7.38□□□□□ -1.23
SNCA-202ENST00000345009 BOD1L2Q8IYS8 172 aa7.38□□□□□ -1.23
SNCA-202ENST00000345009 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
SNCA-202ENST00000345009 FAT1Q14517 4588 aa7.38□□□□□ -1.23
SNCA-202ENST00000345009 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
SNCA-202ENST00000345009 C9orf118A6NHY6 69 aa7.36□□□□□ -1.23
SNCA-202ENST00000345009 TMEM238C9JI98 176 aa7.36□□□□□ -1.23
SNCA-202ENST00000345009 INAFM2P0DMQ5 153 aa7.36□□□□□ -1.23
SNCA-202ENST00000345009 PRR3P79522 188 aaKnown RBP7.36□□□□□ -1.23
SNCA-202ENST00000345009 JOSD1Q15040 202 aaPredicted RBP7.36□□□□□ -1.23
SNCA-202ENST00000345009 LOC107984156A0A0G2JMH3 177 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 VPREB1P12018 145 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 C1orf137Q5JT78 98 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 ARL17AQ8IVW1 177 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 DAND5Q8N907 189 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 LINC00167Q96N53 147 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
SNCA-202ENST00000345009 GAGE10A6NGK3 116 aa7.34□□□□□ -1.23
SNCA-202ENST00000345009 M0R378 163 aa7.34□□□□□ -1.23
SNCA-202ENST00000345009 Q6ZVH6 145 aa7.34□□□□□ -1.23
SNCA-202ENST00000345009 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
SNCA-202ENST00000345009 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
SNCA-202ENST00000345009 TTTY13Q9BZ97 58 aa7.34□□□□□ -1.23
SNCA-202ENST00000345009 RPL37AP8A6NKH3 93 aa7.33□□□□□ -1.24
SNCA-202ENST00000345009 NDUFC2O95298 119 aa7.33□□□□□ -1.24
SNCA-202ENST00000345009 ADAMTSL4-AS1Q5T5F5 129 aa7.33□□□□□ -1.24
SNCA-202ENST00000345009 IFITM1P13164 125 aa7.32□□□□□ -1.24
SNCA-202ENST00000345009 FLG2Q5D862 2391 aaPredicted RBP7.31□□□□□ -1.24
SNCA-202ENST00000345009 TRBV10-2A0A0K0K1G8 114 aa7.31□□□□□ -1.24
SNCA-202ENST00000345009 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
SNCA-202ENST00000345009 SRSF9Q13242 221 aaKnown RBP eCLIP7.31□□□□□ -1.24
SNCA-202ENST00000345009 SPINK6Q6UWN8 80 aa7.31□□□□□ -1.24
SNCA-202ENST00000345009 LINC00308Q8TCZ7 52 aa7.31□□□□□ -1.24
SNCA-202ENST00000345009 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
SNCA-202ENST00000345009 PAM16Q9Y3D7 125 aa7.31□□□□□ -1.24
SNCA-202ENST00000345009 IGLV1-50A0A075B6I6 118 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 COX8AP10176 69 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 NPC2P61916 151 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 LINC00518Q8N0U6 118 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 LITAFQ99732 161 aa7.3□□□□□ -1.24
SNCA-202ENST00000345009 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms