RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 PLNP26678 52 aa11.89□□□□□ -0.51
CEACAM3-201ENST00000344550 FAM229BQ4G0N7 80 aa11.89□□□□□ -0.51
CEACAM3-201ENST00000344550 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
CEACAM3-201ENST00000344550 ATP6V1G1O75348 118 aa11.88□□□□□ -0.51
CEACAM3-201ENST00000344550 SERF1AO75920 110 aa11.88□□□□□ -0.51
CEACAM3-201ENST00000344550 MYMXA0A1B0GTQ4 84 aa11.87□□□□□ -0.51
CEACAM3-201ENST00000344550 COLCA2A8K830 154 aa11.87□□□□□ -0.51
CEACAM3-201ENST00000344550 MAP1LC3CQ9BXW4 147 aa11.87□□□□□ -0.51
CEACAM3-201ENST00000344550 M0R378 163 aa11.86□□□□□ -0.51
CEACAM3-201ENST00000344550 SCO1O75880 301 aa11.86□□□□□ -0.51
CEACAM3-201ENST00000344550 LINC00310P59036 64 aa11.86□□□□□ -0.51
CEACAM3-201ENST00000344550 SLC7A5P1Q8MH63 180 aa11.86□□□□□ -0.51
CEACAM3-201ENST00000344550 NDUFA12Q9UI09 145 aa11.86□□□□□ -0.51
CEACAM3-201ENST00000344550 IGKV2D-26A0A0A0MRZ7 120 aa11.85□□□□□ -0.51
CEACAM3-201ENST00000344550 A0A087X002 238 aa11.84□□□□□ -0.51
CEACAM3-201ENST00000344550 CTAG1AP78358 180 aa11.84□□□□□ -0.51
CEACAM3-201ENST00000344550 MEIG1Q5JSS6 88 aa11.84□□□□□ -0.51
CEACAM3-201ENST00000344550 Q8NDZ9 215 aa11.84□□□□□ -0.51
CEACAM3-201ENST00000344550 TYMSOSQ8TAI1 123 aa11.84□□□□□ -0.51
CEACAM3-201ENST00000344550 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
CEACAM3-201ENST00000344550 SMIM13P0DJ93 91 aa11.83□□□□□ -0.52
CEACAM3-201ENST00000344550 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
CEACAM3-201ENST00000344550 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
CEACAM3-201ENST00000344550 LEPROTO15243 131 aa11.82□□□□□ -0.52
CEACAM3-201ENST00000344550 DPM2O94777 84 aa11.82□□□□□ -0.52
CEACAM3-201ENST00000344550 LOC107984156A0A0G2JMH3 177 aa11.81□□□□□ -0.52
CEACAM3-201ENST00000344550 H0Y8G0 127 aa11.81□□□□□ -0.52
CEACAM3-201ENST00000344550 NMUP48645 174 aa11.81□□□□□ -0.52
CEACAM3-201ENST00000344550 HERVK_113P61574 105 aa11.81□□□□□ -0.52
CEACAM3-201ENST00000344550 ARL17AQ8IVW1 177 aa11.81□□□□□ -0.52
CEACAM3-201ENST00000344550 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
CEACAM3-201ENST00000344550 MIR7-3HGQ8N6C7 128 aa11.81□□□□□ -0.52
CEACAM3-201ENST00000344550 A0A0U1RRA0 63 aa11.8□□□□□ -0.52
CEACAM3-201ENST00000344550 PRLHP81277 87 aa11.8□□□□□ -0.52
CEACAM3-201ENST00000344550 PRYO14603 147 aa11.78□□□□□ -0.52
CEACAM3-201ENST00000344550 KCNQ1DNQ9H478 68 aa11.78□□□□□ -0.52
CEACAM3-201ENST00000344550 J3QQQ9 107 aa11.77□□□□□ -0.53
CEACAM3-201ENST00000344550 IGKCP01834 107 aa11.77□□□□□ -0.53
CEACAM3-201ENST00000344550 FABP4P15090 132 aa11.77□□□□□ -0.53
CEACAM3-201ENST00000344550 S100A12P80511 92 aa11.77□□□□□ -0.53
CEACAM3-201ENST00000344550 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
CEACAM3-201ENST00000344550 SPRR1AP35321 89 aa11.75□□□□□ -0.53
CEACAM3-201ENST00000344550 KRTAP13-2Q52LG2 175 aa11.75□□□□□ -0.53
CEACAM3-201ENST00000344550 TRBV10-2A0A0K0K1G8 114 aa11.74□□□□□ -0.53
CEACAM3-201ENST00000344550 ZNF706Q9Y5V0 76 aaPredicted RBP11.74□□□□□ -0.53
CEACAM3-201ENST00000344550 LGALS3P17931 250 aaKnown RBP11.73□□□□□ -0.53
CEACAM3-201ENST00000344550 TSPEAR-AS2P59090 65 aa11.73□□□□□ -0.53
CEACAM3-201ENST00000344550 PRR4Q16378 134 aa11.73□□□□□ -0.53
CEACAM3-201ENST00000344550 ANAPC11Q9NYG5 84 aa11.73□□□□□ -0.53
CEACAM3-201ENST00000344550 HIGD2AQ9BW72 106 aa11.72□□□□□ -0.53
CEACAM3-201ENST00000344550 LINC00304Q8N9R0 145 aa11.71□□□□□ -0.53
CEACAM3-201ENST00000344550 KRTAP4-16G5E9R7 235 aaPredicted RBP11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 NDUFC2O95298 119 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 TSPAN13O95857 204 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
CEACAM3-201ENST00000344550 E9PLD3 99 aa11.69□□□□□ -0.54
CEACAM3-201ENST00000344550 NCR3O14931 201 aa11.69□□□□□ -0.54
CEACAM3-201ENST00000344550 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
CEACAM3-201ENST00000344550 TRBV10-3A0A0K0K1G6 114 aa11.68□□□□□ -0.54
CEACAM3-201ENST00000344550 ETDCA0A1B0GVM5 59 aa11.68□□□□□ -0.54
CEACAM3-201ENST00000344550 SYS1-DBNDD2H3BUS1 97 aa11.68□□□□□ -0.54
CEACAM3-201ENST00000344550 SPRR4Q96PI1 79 aa11.68□□□□□ -0.54
CEACAM3-201ENST00000344550 SPANXB1Q9NS25 103 aaPredicted RBP11.68□□□□□ -0.54
CEACAM3-201ENST00000344550 SPAG11AQ6PDA7 123 aa11.67□□□□□ -0.54
CEACAM3-201ENST00000344550 RNF213Q63HN8 5207 aa11.65□□□□□ -0.54
CEACAM3-201ENST00000344550 PET117Q6UWS5 81 aa11.65□□□□□ -0.54
CEACAM3-201ENST00000344550 LPAP08519 4548 aa11.65□□□□□ -0.55
CEACAM3-201ENST00000344550 DDTP30046 118 aa11.64□□□□□ -0.55
CEACAM3-201ENST00000344550 LINC01545Q5VT33 79 aa11.64□□□□□ -0.55
CEACAM3-201ENST00000344550 DAND5Q8N907 189 aa11.64□□□□□ -0.55
CEACAM3-201ENST00000344550 CBY1Q9Y3M2 126 aa11.64□□□□□ -0.55
CEACAM3-201ENST00000344550 A0A0J9YXY3 114 aa11.62□□□□□ -0.55
CEACAM3-201ENST00000344550 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
CEACAM3-201ENST00000344550 COA6Q5JTJ3 125 aaKnown RBP11.62□□□□□ -0.55
CEACAM3-201ENST00000344550 SMCR5Q8TEV8 140 aa11.62□□□□□ -0.55
CEACAM3-201ENST00000344550 B5MCH6 92 aa11.61□□□□□ -0.55
CEACAM3-201ENST00000344550 TIMM17BO60830 172 aa11.6□□□□□ -0.55
CEACAM3-201ENST00000344550 LINC00483Q53H64 154 aa11.6□□□□□ -0.55
CEACAM3-201ENST00000344550 S100A7L2Q5SY68 101 aa11.6□□□□□ -0.55
CEACAM3-201ENST00000344550 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
CEACAM3-201ENST00000344550 Q6ZRX8 168 aa11.58□□□□□ -0.56
CEACAM3-201ENST00000344550 C3orf22Q8N5N4 141 aa11.58□□□□□ -0.56
CEACAM3-201ENST00000344550 ADAMTSL4-AS1Q5T5F5 129 aa11.57□□□□□ -0.56
CEACAM3-201ENST00000344550 C4orf48Q5BLP8 95 aa11.56□□□□□ -0.56
CEACAM3-201ENST00000344550 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
CEACAM3-201ENST00000344550 AKR1D1P51857 326 aa11.55□□□□□ -0.56
CEACAM3-201ENST00000344550 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
CEACAM3-201ENST00000344550 SPANXCQ9NY87 97 aa11.55□□□□□ -0.56
CEACAM3-201ENST00000344550 TRAV23DV6A0A075B6W5 121 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms