RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
TPM3-208ENST00000341485 Q8NDZ9 215 aa10.11□□□□□ -0.79
TPM3-208ENST00000341485 KRTAP21-3Q3LHN1 58 aa10.11□□□□□ -0.79
TPM3-208ENST00000341485 LINC00526Q96FQ7 95 aa10.11□□□□□ -0.79
TPM3-208ENST00000341485 C9orf129Q5T035 196 aaKnown RBP10.1□□□□□ -0.79
TPM3-208ENST00000341485 HUWE1Q7Z6Z7 4374 aaKnown RBP10.09□□□□□ -0.79
TPM3-208ENST00000341485 INAFM2P0DMQ5 153 aa10.09□□□□□ -0.79
TPM3-208ENST00000341485 NBEAL1Q6ZS30 2694 aa10.09□□□□□ -0.79
TPM3-208ENST00000341485 SLPIP03973 132 aa10.08□□□□□ -0.8
TPM3-208ENST00000341485 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
TPM3-208ENST00000341485 ANAPC13Q9BS18 74 aa10.08□□□□□ -0.8
TPM3-208ENST00000341485 NCR3O14931 201 aa10.07□□□□□ -0.8
TPM3-208ENST00000341485 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
TPM3-208ENST00000341485 TENM3Q9P273 2699 aa10.07□□□□□ -0.8
TPM3-208ENST00000341485 WFDC10BQ8IUB3 73 aa10.06□□□□□ -0.8
TPM3-208ENST00000341485 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
TPM3-208ENST00000341485 OBSCN-AS1Q96MR7 158 aa10.06□□□□□ -0.8
TPM3-208ENST00000341485 NHLRC4P0CG21 123 aaPredicted RBP10.05□□□□□ -0.8
TPM3-208ENST00000341485 ESRGQ1W209 222 aa10.05□□□□□ -0.8
TPM3-208ENST00000341485 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
TPM3-208ENST00000341485 SDIM1Q6ZPB5 146 aa10.05□□□□□ -0.8
TPM3-208ENST00000341485 LINC00167Q96N53 147 aa10.05□□□□□ -0.8
TPM3-208ENST00000341485 TRBV7-7A0A0K0K1E9 115 aa10.05□□□□□ -0.8
TPM3-208ENST00000341485 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
TPM3-208ENST00000341485 C14orf132Q9NPU4 83 aa10.04□□□□□ -0.8
TPM3-208ENST00000341485 ORMDL1Q9P0S3 153 aa10.04□□□□□ -0.8
TPM3-208ENST00000341485 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
TPM3-208ENST00000341485 A0A1B0GX51 115 aa10.03□□□□□ -0.8
TPM3-208ENST00000341485 Q8N814 137 aa10.03□□□□□ -0.8
TPM3-208ENST00000341485 LINC00643Q86TS7 51 aa10.02□□□□□ -0.81
TPM3-208ENST00000341485 C6orf48Q9UBA6 75 aa10.02□□□□□ -0.81
TPM3-208ENST00000341485 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
TPM3-208ENST00000341485 C6orf99Q4VX62 202 aa10.01□□□□□ -0.81
TPM3-208ENST00000341485 KRTAP26-1Q6PEX3 210 aa10.01□□□□□ -0.81
TPM3-208ENST00000341485 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
TPM3-208ENST00000341485 RPL18AQ02543 176 aaKnown RBP9.98□□□□□ -0.81
TPM3-208ENST00000341485 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
TPM3-208ENST00000341485 IGLV6-57P01721 117 aa9.98□□□□□ -0.81
TPM3-208ENST00000341485 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
TPM3-208ENST00000341485 DNHD1Q96M86 4753 aa9.98□□□□□ -0.81
TPM3-208ENST00000341485 LINC00575Q6W349 94 aa9.97□□□□□ -0.81
TPM3-208ENST00000341485 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.81
TPM3-208ENST00000341485 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.81
TPM3-208ENST00000341485 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
TPM3-208ENST00000341485 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
TPM3-208ENST00000341485 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
TPM3-208ENST00000341485 CAMK2N2Q96S95 79 aa9.95□□□□□ -0.82
TPM3-208ENST00000341485 TMEM256-PLSCR3K7ERE1 68 aa9.94□□□□□ -0.82
TPM3-208ENST00000341485 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
TPM3-208ENST00000341485 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
TPM3-208ENST00000341485 DNAH10OSP0CZ25 163 aa9.92□□□□□ -0.82
TPM3-208ENST00000341485 Q6ZRU5 148 aa9.92□□□□□ -0.82
TPM3-208ENST00000341485 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
TPM3-208ENST00000341485 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
TPM3-208ENST00000341485 JMJD7-PLA2G4BH0Y9G9 81 aa9.92□□□□□ -0.82
TPM3-208ENST00000341485 CCDC179H3BU77 68 aa9.92□□□□□ -0.82
TPM3-208ENST00000341485 CCKP06307 115 aa9.92□□□□□ -0.82
TPM3-208ENST00000341485 hADV29S1A0JD25 119 aa9.91□□□□□ -0.82
TPM3-208ENST00000341485 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
TPM3-208ENST00000341485 TRAV23DV6A0A075B6W5 121 aa9.9□□□□□ -0.82
TPM3-208ENST00000341485 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
TPM3-208ENST00000341485 C2orf48Q96LS8 159 aa9.9□□□□□ -0.82
TPM3-208ENST00000341485 VPREB1P12018 145 aa9.89□□□□□ -0.83
TPM3-208ENST00000341485 APLNQ9ULZ1 77 aa9.89□□□□□ -0.83
TPM3-208ENST00000341485 IGKV2D-24A0A075B6R9 120 aa9.89□□□□□ -0.83
TPM3-208ENST00000341485 UBE2DNLQ8IWF7 75 aa9.89□□□□□ -0.83
TPM3-208ENST00000341485 UPK3BQ9BT76 320 aa9.89□□□□□ -0.83
TPM3-208ENST00000341485 Q6JHZ5 121 aa9.87□□□□□ -0.83
TPM3-208ENST00000341485 DIRC1Q969H9 104 aa9.87□□□□□ -0.83
TPM3-208ENST00000341485 NDUFC2-KCTD14E9PQ53 114 aa9.87□□□□□ -0.83
TPM3-208ENST00000341485 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
TPM3-208ENST00000341485 B5MCH6 92 aa9.86□□□□□ -0.83
TPM3-208ENST00000341485 ZNF73O43830 326 aaPredicted RBP9.86□□□□□ -0.83
TPM3-208ENST00000341485 Q6ZQY7 126 aa9.85□□□□□ -0.83
TPM3-208ENST00000341485 M0R378 163 aa9.84□□□□□ -0.83
TPM3-208ENST00000341485 Q6ZRP5 223 aa9.84□□□□□ -0.83
TPM3-208ENST00000341485 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
TPM3-208ENST00000341485 COX7BP24311 80 aa9.84□□□□□ -0.83
TPM3-208ENST00000341485 F8WDY8 70 aa9.83□□□□□ -0.84
TPM3-208ENST00000341485 ELOF1P60002 83 aaKnown RBP9.83□□□□□ -0.84
TPM3-208ENST00000341485 SYCNQ0VAF6 134 aa9.83□□□□□ -0.84
TPM3-208ENST00000341485 RBM3P98179 157 aaKnown RBP9.82□□□□□ -0.84
TPM3-208ENST00000341485 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
TPM3-208ENST00000341485 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
TPM3-208ENST00000341485 Q6ZQT0 140 aa9.81□□□□□ -0.84
TPM3-208ENST00000341485 TRBV7-6A0A0J9YX20 115 aa9.81□□□□□ -0.84
TPM3-208ENST00000341485 RMI2Q96E14 147 aa9.81□□□□□ -0.84
TPM3-208ENST00000341485 PRKDCP78527 4128 aaKnown RBP9.8□□□□□ -0.84
TPM3-208ENST00000341485 LOC110117498A0A087WWA1 95 aa9.8□□□□□ -0.84
TPM3-208ENST00000341485 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
TPM3-208ENST00000341485 STAB2Q8WWQ8 2551 aa9.79□□□□□ -0.84
TPM3-208ENST00000341485 H3BQ85 93 aa9.79□□□□□ -0.84
TPM3-208ENST00000341485 SS18L2Q9UHA2 77 aa9.79□□□□□ -0.84
TPM3-208ENST00000341485 A0A087WVE0 104 aa9.77□□□□□ -0.85
TPM3-208ENST00000341485 M0R2N4 97 aa9.77□□□□□ -0.85
TPM3-208ENST00000341485 CASC10Q5T4H9 136 aa9.77□□□□□ -0.85
TPM3-208ENST00000341485 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
TPM3-208ENST00000341485 SERTAD4-AS1Q5TG53 156 aa9.76□□□□□ -0.85
TPM3-208ENST00000341485 MEGF8Q7Z7M0 2845 aa9.76□□□□□ -0.85
TPM3-208ENST00000341485 DYNC2H1Q8NCM8 4307 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms