RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.37□□□□□ -1.07
SIRPB3P-201ENST00000340424 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
SIRPB3P-201ENST00000340424 PCP2Q8IVA1 136 aa8.37□□□□□ -1.07
SIRPB3P-201ENST00000340424 TIMM17AQ99595 171 aa8.37□□□□□ -1.07
SIRPB3P-201ENST00000340424 GTF2H5Q6ZYL4 71 aa8.36□□□□□ -1.07
SIRPB3P-201ENST00000340424 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
SIRPB3P-201ENST00000340424 TOMM6Q96B49 74 aa8.36□□□□□ -1.07
SIRPB3P-201ENST00000340424 F8VRH5 84 aa8.35□□□□□ -1.07
SIRPB3P-201ENST00000340424 K7EP34 96 aa8.35□□□□□ -1.07
SIRPB3P-201ENST00000340424 TLX1NBP0CAT3 122 aa8.35□□□□□ -1.07
SIRPB3P-201ENST00000340424 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
SIRPB3P-201ENST00000340424 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
SIRPB3P-201ENST00000340424 C21orf62-AS1Q17RA5 79 aa8.35□□□□□ -1.07
SIRPB3P-201ENST00000340424 IGKV2D-26A0A0A0MRZ7 120 aa8.34□□□□□ -1.07
SIRPB3P-201ENST00000340424 NMUP48645 174 aa8.34□□□□□ -1.07
SIRPB3P-201ENST00000340424 HERVK_113P63121 156 aa8.34□□□□□ -1.07
SIRPB3P-201ENST00000340424 ERASQ7Z444 233 aa8.34□□□□□ -1.07
SIRPB3P-201ENST00000340424 CST9LQ9H4G1 147 aa8.34□□□□□ -1.07
SIRPB3P-201ENST00000340424 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
SIRPB3P-201ENST00000340424 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
SIRPB3P-201ENST00000340424 ZC2HC1BQ5TFG8 222 aa8.33□□□□□ -1.08
SIRPB3P-201ENST00000340424 Q6ZRP5 223 aa8.33□□□□□ -1.08
SIRPB3P-201ENST00000340424 A0A1W2PPM0 123 aa8.32□□□□□ -1.08
SIRPB3P-201ENST00000340424 GAGE10A6NGK3 116 aa8.32□□□□□ -1.08
SIRPB3P-201ENST00000340424 OCIAD2Q56VL3 154 aa8.32□□□□□ -1.08
SIRPB3P-201ENST00000340424 SCGB3A1Q96QR1 104 aa8.32□□□□□ -1.08
SIRPB3P-201ENST00000340424 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 A0A1B0GWB2 263 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 PRSS2P07478 247 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 C9orf116Q5BN46 136 aaPredicted RBP8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 CEND1Q8N111 149 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 C6orf48Q9UBA6 75 aa8.31□□□□□ -1.08
SIRPB3P-201ENST00000340424 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
SIRPB3P-201ENST00000340424 K7ERU9 68 aa8.3□□□□□ -1.08
SIRPB3P-201ENST00000340424 C10orf25Q5T742 122 aa8.3□□□□□ -1.08
SIRPB3P-201ENST00000340424 Q8IZM0 81 aa8.3□□□□□ -1.08
SIRPB3P-201ENST00000340424 E9PLD3 99 aa8.29□□□□□ -1.08
SIRPB3P-201ENST00000340424 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
SIRPB3P-201ENST00000340424 H3BUT2 72 aa8.29□□□□□ -1.08
SIRPB3P-201ENST00000340424 FXYD2P54710 66 aa8.29□□□□□ -1.08
SIRPB3P-201ENST00000340424 CKS1BP61024 79 aa8.29□□□□□ -1.08
SIRPB3P-201ENST00000340424 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
SIRPB3P-201ENST00000340424 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
SIRPB3P-201ENST00000340424 HMCN2Q8NDA2 5059 aa8.28□□□□□ -1.08
SIRPB3P-201ENST00000340424 TINCRA0A1B0GVN0 87 aa8.28□□□□□ -1.08
SIRPB3P-201ENST00000340424 FABP2P12104 132 aa8.28□□□□□ -1.08
SIRPB3P-201ENST00000340424 CXCL5P42830 114 aa8.28□□□□□ -1.08
SIRPB3P-201ENST00000340424 C6orf226Q5I0X4 101 aa8.28□□□□□ -1.08
SIRPB3P-201ENST00000340424 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
SIRPB3P-201ENST00000340424 SPCS1Q9Y6A9 102 aa8.27□□□□□ -1.09
SIRPB3P-201ENST00000340424 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 MYMXA0A1B0GTQ4 84 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 PMVKQ15126 192 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 GAGE2EQ4V326 116 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 REG3GQ6UW15 175 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 C2orf82Q6UX34 121 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 TOMM7Q9P0U1 55 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 GAGE2DQ9UEU5 116 aa8.26□□□□□ -1.09
SIRPB3P-201ENST00000340424 TTTY13Q9BZ97 58 aa8.25□□□□□ -1.09
SIRPB3P-201ENST00000340424 TNXBP22105 4242 aa8.25□□□□□ -1.09
SIRPB3P-201ENST00000340424 MT1HL1P0DM35 61 aa8.24□□□□□ -1.09
SIRPB3P-201ENST00000340424 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
SIRPB3P-201ENST00000340424 LINC01600Q96MT4 127 aa8.24□□□□□ -1.09
SIRPB3P-201ENST00000340424 PSORS1C2Q9UIG4 136 aa8.24□□□□□ -1.09
SIRPB3P-201ENST00000340424 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
SIRPB3P-201ENST00000340424 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
SIRPB3P-201ENST00000340424 PCP4P48539 62 aa8.23□□□□□ -1.09
SIRPB3P-201ENST00000340424 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
SIRPB3P-201ENST00000340424 C11orf86A6NJI1 115 aa8.22□□□□□ -1.09
SIRPB3P-201ENST00000340424 HERVK_113P61574 105 aa8.22□□□□□ -1.09
SIRPB3P-201ENST00000340424 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
SIRPB3P-201ENST00000340424 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
SIRPB3P-201ENST00000340424 NHP2Q9NX24 153 aaKnown RBP8.22□□□□□ -1.09
SIRPB3P-201ENST00000340424 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
SIRPB3P-201ENST00000340424 M0QXV9 152 aa8.21□□□□□ -1.1
SIRPB3P-201ENST00000340424 C1orf137Q5JT78 98 aa8.21□□□□□ -1.1
SIRPB3P-201ENST00000340424 COX7B2Q8TF08 81 aa8.21□□□□□ -1.1
SIRPB3P-201ENST00000340424 RAB37Q96AX2 223 aa8.21□□□□□ -1.1
SIRPB3P-201ENST00000340424 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
SIRPB3P-201ENST00000340424 HIST1H4GQ99525 98 aa8.2□□□□□ -1.1
SIRPB3P-201ENST00000340424 F8W1H4 67 aa8.19□□□□□ -1.1
SIRPB3P-201ENST00000340424 K7ERJ3 54 aa8.19□□□□□ -1.1
SIRPB3P-201ENST00000340424 VPS25Q9BRG1 176 aa8.19□□□□□ -1.1
SIRPB3P-201ENST00000340424 ZNF815PA8K554 130 aa8.18□□□□□ -1.1
SIRPB3P-201ENST00000340424 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
SIRPB3P-201ENST00000340424 UBE2BP63146 152 aa8.18□□□□□ -1.1
SIRPB3P-201ENST00000340424 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
SIRPB3P-201ENST00000340424 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
SIRPB3P-201ENST00000340424 NAA38Q9BRA0 125 aaKnown RBP8.17□□□□□ -1.1
SIRPB3P-201ENST00000340424 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
SIRPB3P-201ENST00000340424 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
SIRPB3P-201ENST00000340424 IGLV5-39A0A0G2JS06 123 aa8.15□□□□□ -1.1
SIRPB3P-201ENST00000340424 LYRM7Q5U5X0 104 aa8.15□□□□□ -1.1
SIRPB3P-201ENST00000340424 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
SIRPB3P-201ENST00000340424 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
SIRPB3P-201ENST00000340424 TMEM223A0PJW6 202 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms