RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TTC32Q5I0X7 151 aa6.83□□□□□ -1.32
RBFOX1-202ENST00000340209 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
RBFOX1-202ENST00000340209 C6orf48Q9UBA6 75 aa6.83□□□□□ -1.32
RBFOX1-202ENST00000340209 LINC00588Q9Y4M8 146 aa6.83□□□□□ -1.32
RBFOX1-202ENST00000340209 Q8NDZ9 215 aa6.83□□□□□ -1.32
RBFOX1-202ENST00000340209 PSCAO43653 123 aa6.82□□□□□ -1.32
RBFOX1-202ENST00000340209 GAGE2AQ6NT46 116 aa6.82□□□□□ -1.32
RBFOX1-202ENST00000340209 MT-ATP8P03928 68 aa6.82□□□□□ -1.32
RBFOX1-202ENST00000340209 CXCL5P42830 114 aa6.82□□□□□ -1.32
RBFOX1-202ENST00000340209 CMYA5Q8N3K9 4069 aa6.82□□□□□ -1.32
RBFOX1-202ENST00000340209 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.81□□□□□ -1.32
RBFOX1-202ENST00000340209 M0QXV9 152 aa6.81□□□□□ -1.32
RBFOX1-202ENST00000340209 GAGE2BQ13066 116 aa6.81□□□□□ -1.32
RBFOX1-202ENST00000340209 PRR34Q9NV39 138 aa6.81□□□□□ -1.32
RBFOX1-202ENST00000340209 M0R2N4 97 aa6.8□□□□□ -1.32
RBFOX1-202ENST00000340209 C14orf132Q9NPU4 83 aa6.8□□□□□ -1.32
RBFOX1-202ENST00000340209 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
RBFOX1-202ENST00000340209 XGP55808 180 aa6.79□□□□□ -1.32
RBFOX1-202ENST00000340209 KLK5Q9Y337 293 aaPredicted RBP6.79□□□□□ -1.32
RBFOX1-202ENST00000340209 TRBV10-3A0A0K0K1G6 114 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 TMEM126AQ9H061 195 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 RPL28P46779 137 aaKnown RBP6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 H3BT86 120 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 TM2D3Q9BRN9 247 aa6.78□□□□□ -1.32
RBFOX1-202ENST00000340209 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
RBFOX1-202ENST00000340209 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
RBFOX1-202ENST00000340209 SNCGO76070 127 aa6.77□□□□□ -1.33
RBFOX1-202ENST00000340209 LINC01556Q5JQF7 62 aa6.77□□□□□ -1.33
RBFOX1-202ENST00000340209 C9orf129Q5T035 196 aaKnown RBP6.76□□□□□ -1.33
RBFOX1-202ENST00000340209 LAMTOR3Q9UHA4 124 aa6.76□□□□□ -1.33
RBFOX1-202ENST00000340209 NKAPP1Q8N9T2 125 aa6.76□□□□□ -1.33
RBFOX1-202ENST00000340209 CDIP1Q9H305 208 aa6.76□□□□□ -1.33
RBFOX1-202ENST00000340209 DPH3Q96FX2 82 aa6.76□□□□□ -1.33
RBFOX1-202ENST00000340209 FAM19A5Q7Z5A7 132 aaPredicted RBP6.76□□□□□ -1.33
RBFOX1-202ENST00000340209 DEFB105AQ8NG35 78 aa6.76□□□□□ -1.33
RBFOX1-202ENST00000340209 ORMDL1Q9P0S3 153 aa6.75□□□□□ -1.33
RBFOX1-202ENST00000340209 H0YGX0 51 aa6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 H3BNG1 76 aa6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 COX17Q14061 63 aa6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 TRACP01848 142 aa6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 Q6ZRP5 223 aa6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 LYSTQ99698 3801 aa6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 FAM168BA1KXE4 195 aa6.74□□□□□ -1.33
RBFOX1-202ENST00000340209 HUWE1Q7Z6Z7 4374 aaKnown RBP6.73□□□□□ -1.33
RBFOX1-202ENST00000340209 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
RBFOX1-202ENST00000340209 Q6ZQY7 126 aa6.72□□□□□ -1.33
RBFOX1-202ENST00000340209 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.33
RBFOX1-202ENST00000340209 DIRC1Q969H9 104 aa6.71□□□□□ -1.33
RBFOX1-202ENST00000340209 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
RBFOX1-202ENST00000340209 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
RBFOX1-202ENST00000340209 Q8N814 137 aa6.7□□□□□ -1.34
RBFOX1-202ENST00000340209 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
RBFOX1-202ENST00000340209 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
RBFOX1-202ENST00000340209 hADV29S1A0JD25 119 aa6.7□□□□□ -1.34
RBFOX1-202ENST00000340209 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
RBFOX1-202ENST00000340209 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
RBFOX1-202ENST00000340209 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
RBFOX1-202ENST00000340209 RMI2Q96E14 147 aa6.69□□□□□ -1.34
RBFOX1-202ENST00000340209 NDUFC2O95298 119 aa6.68□□□□□ -1.34
RBFOX1-202ENST00000340209 COX7BP24311 80 aa6.68□□□□□ -1.34
RBFOX1-202ENST00000340209 INAFM2P0DMQ5 153 aa6.68□□□□□ -1.34
RBFOX1-202ENST00000340209 MEGF8Q7Z7M0 2845 aa6.67□□□□□ -1.34
RBFOX1-202ENST00000340209 DNHD1Q96M86 4753 aa6.67□□□□□ -1.34
RBFOX1-202ENST00000340209 CHTF8P0CG12 524 aa6.66□□□□□ -1.34
RBFOX1-202ENST00000340209 VPREB1P12018 145 aa6.66□□□□□ -1.34
RBFOX1-202ENST00000340209 B9D2Q9BPU9 175 aa6.66□□□□□ -1.34
RBFOX1-202ENST00000340209 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 M0R378 163 aa6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 LINC00575Q6W349 94 aa6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 SDIM1Q6ZPB5 146 aa6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 C7orf33Q8WU49 177 aa6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 C2orf48Q96LS8 159 aa6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 HIST1H4AP62805 103 aaKnown RBP6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 UBE2BP63146 152 aa6.65□□□□□ -1.35
RBFOX1-202ENST00000340209 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
RBFOX1-202ENST00000340209 C22orf24Q9Y442 160 aa6.64□□□□□ -1.35
RBFOX1-202ENST00000340209 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
RBFOX1-202ENST00000340209 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
RBFOX1-202ENST00000340209 PPDPFQ9H3Y8 114 aa6.64□□□□□ -1.35
RBFOX1-202ENST00000340209 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
RBFOX1-202ENST00000340209 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
RBFOX1-202ENST00000340209 IGLV6-57P01721 117 aa6.63□□□□□ -1.35
RBFOX1-202ENST00000340209 TMEM256-PLSCR3K7ERE1 68 aa6.62□□□□□ -1.35
RBFOX1-202ENST00000340209 SRRM2Q9UQ35 2752 aaKnown RBP6.62□□□□□ -1.35
RBFOX1-202ENST00000340209 SEC61GP60059 68 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 APLNQ9ULZ1 77 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 RBM3P98179 157 aaKnown RBP6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 LINC00846Q9NV44 126 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 HAMPP81172 84 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 PKIGQ9Y2B9 76 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 DNAH9Q9NYC9 4486 aa6.61□□□□□ -1.35
RBFOX1-202ENST00000340209 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
RBFOX1-202ENST00000340209 FAM236AA0A1B0GUQ0 79 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms