RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CST9LQ9H4G1 147 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 H3BRM9 83 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 MT-ND4LP03901 98 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 SPRR4Q96PI1 79 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
CSMD2-202ENST00000338325 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
CSMD2-202ENST00000338325 SEC61BP60468 96 aaKnown RBP6.49□□□□□ -1.37
CSMD2-202ENST00000338325 PMVKQ15126 192 aa6.49□□□□□ -1.37
CSMD2-202ENST00000338325 ERG28Q9UKR5 140 aa6.49□□□□□ -1.37
CSMD2-202ENST00000338325 COLCA2A8K830 154 aa6.48□□□□□ -1.37
CSMD2-202ENST00000338325 KIAA1644Q3SXP7 199 aa6.48□□□□□ -1.37
CSMD2-202ENST00000338325 Q8NDZ9 215 aa6.48□□□□□ -1.37
CSMD2-202ENST00000338325 ZNF706Q9Y5V0 76 aaPredicted RBP6.48□□□□□ -1.37
CSMD2-202ENST00000338325 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
CSMD2-202ENST00000338325 COX17Q14061 63 aa6.47□□□□□ -1.37
CSMD2-202ENST00000338325 Q8NBF4 154 aa6.47□□□□□ -1.37
CSMD2-202ENST00000338325 C12orf57Q99622 126 aa6.47□□□□□ -1.37
CSMD2-202ENST00000338325 LINC01546A6NGU7 62 aa6.46□□□□□ -1.37
CSMD2-202ENST00000338325 DAND5Q8N907 189 aa6.46□□□□□ -1.37
CSMD2-202ENST00000338325 SMIM6P0DI80 62 aa6.45□□□□□ -1.38
CSMD2-202ENST00000338325 IGLC3P0DOY3 106 aa6.45□□□□□ -1.38
CSMD2-202ENST00000338325 AKR1D1P51857 326 aa6.45□□□□□ -1.38
CSMD2-202ENST00000338325 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
CSMD2-202ENST00000338325 SPINK1P00995 79 aa6.45□□□□□ -1.38
CSMD2-202ENST00000338325 RHEBQ15382 184 aa6.45□□□□□ -1.38
CSMD2-202ENST00000338325 ZNF22P17026 224 aaPredicted RBP6.44□□□□□ -1.38
CSMD2-202ENST00000338325 ZNF625Q96I27 306 aaPredicted RBP6.44□□□□□ -1.38
CSMD2-202ENST00000338325 PCP4L1A6NKN8 68 aa6.43□□□□□ -1.38
CSMD2-202ENST00000338325 NDUFA12Q9UI09 145 aa6.43□□□□□ -1.38
CSMD2-202ENST00000338325 S100A6P06703 90 aa6.42□□□□□ -1.38
CSMD2-202ENST00000338325 SFTA2Q6UW10 78 aa6.42□□□□□ -1.38
CSMD2-202ENST00000338325 RPS10P5Q9NQ39 176 aa6.42□□□□□ -1.38
CSMD2-202ENST00000338325 PRYO14603 147 aa6.41□□□□□ -1.38
CSMD2-202ENST00000338325 SNRPEP62304 92 aaKnown RBP6.41□□□□□ -1.38
CSMD2-202ENST00000338325 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
CSMD2-202ENST00000338325 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
CSMD2-202ENST00000338325 TRAV9-1A0A075B6T8 112 aa6.4□□□□□ -1.38
CSMD2-202ENST00000338325 NDUFA6P56556 154 aa6.4□□□□□ -1.38
CSMD2-202ENST00000338325 S100PP25815 95 aa6.4□□□□□ -1.39
CSMD2-202ENST00000338325 LINC00158P58513 81 aa6.4□□□□□ -1.39
CSMD2-202ENST00000338325 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.39
CSMD2-202ENST00000338325 LINC00483Q53H64 154 aa6.4□□□□□ -1.39
CSMD2-202ENST00000338325 Q8N377 158 aa6.4□□□□□ -1.39
CSMD2-202ENST00000338325 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.39
CSMD2-202ENST00000338325 YPEL4Q96NS1 127 aa6.4□□□□□ -1.39
CSMD2-202ENST00000338325 XP32Q5T750 250 aa6.39□□□□□ -1.39
CSMD2-202ENST00000338325 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
CSMD2-202ENST00000338325 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
CSMD2-202ENST00000338325 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
CSMD2-202ENST00000338325 SPRR1AP35321 89 aa6.38□□□□□ -1.39
CSMD2-202ENST00000338325 FABP9Q0Z7S8 132 aa6.38□□□□□ -1.39
CSMD2-202ENST00000338325 MOBPQ13875 183 aa6.37□□□□□ -1.39
CSMD2-202ENST00000338325 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
CSMD2-202ENST00000338325 A0A096LNJ9 63 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 A0A0U1RRA0 63 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 C11orf86A6NJI1 115 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
CSMD2-202ENST00000338325 NCR3O14931 201 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 SLC25A20O43772 301 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 GAGE2AQ6NT46 116 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
CSMD2-202ENST00000338325 SSBP3-AS1Q7Z2R9 100 aa6.35□□□□□ -1.39
CSMD2-202ENST00000338325 BOD1L2Q8IYS8 172 aa6.35□□□□□ -1.39
CSMD2-202ENST00000338325 LINC00587B1AMM8 73 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 HBDP02042 147 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 CFC1BP0CG36 223 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 SMIM13P0DJ93 91 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 MT1HP80294 61 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 COX19Q49B96 90 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 BAGE3Q86Y29 109 aa6.34□□□□□ -1.39
CSMD2-202ENST00000338325 TRBV10-3A0A0K0K1G6 114 aa6.33□□□□□ -1.4
CSMD2-202ENST00000338325 B5MCH6 92 aa6.32□□□□□ -1.4
CSMD2-202ENST00000338325 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
CSMD2-202ENST00000338325 URB1-AS1Q96HZ7 61 aa6.32□□□□□ -1.4
CSMD2-202ENST00000338325 TMEM223A0PJW6 202 aa6.31□□□□□ -1.4
CSMD2-202ENST00000338325 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
CSMD2-202ENST00000338325 LINC00614P0C842 121 aa6.31□□□□□ -1.4
CSMD2-202ENST00000338325 S100A2P29034 98 aa6.31□□□□□ -1.4
CSMD2-202ENST00000338325 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
CSMD2-202ENST00000338325 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
CSMD2-202ENST00000338325 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
CSMD2-202ENST00000338325 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
CSMD2-202ENST00000338325 Q9BRP9 147 aa6.3□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BKO60814 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BJP06899 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BOP23527 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BBP33778 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BDP58876 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BCP62807 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HERV-K104P63124 156 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST2H2BEQ16778 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 PYY3Q5JQD4 70 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST3H2BBQ8N257 126 aa6.29□□□□□ -1.4
CSMD2-202ENST00000338325 HIST1H2BHQ93079 126 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms