RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
SEC13-201ENST00000337354 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
SEC13-201ENST00000337354 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
SEC13-201ENST00000337354 LBHQ53QV2 105 aaPredicted RBP9.63□□□□□ -0.87
SEC13-201ENST00000337354 SERTAD4-AS1Q5TG53 156 aa9.63□□□□□ -0.87
SEC13-201ENST00000337354 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
SEC13-201ENST00000337354 TTTY13Q9BZ97 58 aa9.63□□□□□ -0.87
SEC13-201ENST00000337354 TP73-AS1Q9UF72 201 aa9.63□□□□□ -0.87
SEC13-201ENST00000337354 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
SEC13-201ENST00000337354 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
SEC13-201ENST00000337354 M0QXV9 152 aa9.62□□□□□ -0.87
SEC13-201ENST00000337354 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
SEC13-201ENST00000337354 SCGB1D4Q6XE38 83 aa9.62□□□□□ -0.87
SEC13-201ENST00000337354 PCP2Q8IVA1 136 aa9.62□□□□□ -0.87
SEC13-201ENST00000337354 PHF5AQ7RTV0 110 aaKnown RBP9.61□□□□□ -0.87
SEC13-201ENST00000337354 PYY3Q5JQD4 70 aa9.6□□□□□ -0.87
SEC13-201ENST00000337354 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
SEC13-201ENST00000337354 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
SEC13-201ENST00000337354 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
SEC13-201ENST00000337354 DAND5Q8N907 189 aa9.59□□□□□ -0.87
SEC13-201ENST00000337354 NKAPP1Q8N9T2 125 aa9.59□□□□□ -0.87
SEC13-201ENST00000337354 LITAFQ99732 161 aa9.59□□□□□ -0.87
SEC13-201ENST00000337354 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
SEC13-201ENST00000337354 TMEM238C9JI98 176 aa9.58□□□□□ -0.88
SEC13-201ENST00000337354 VPREB1P12018 145 aa9.58□□□□□ -0.88
SEC13-201ENST00000337354 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
SEC13-201ENST00000337354 Q6ZVH6 145 aa9.58□□□□□ -0.88
SEC13-201ENST00000337354 BOD1L2Q8IYS8 172 aa9.58□□□□□ -0.88
SEC13-201ENST00000337354 COX8AP10176 69 aa9.56□□□□□ -0.88
SEC13-201ENST00000337354 UBE2BP63146 152 aa9.56□□□□□ -0.88
SEC13-201ENST00000337354 SPATA45Q537H7 98 aa9.56□□□□□ -0.88
SEC13-201ENST00000337354 PAM16Q9Y3D7 125 aa9.56□□□□□ -0.88
SEC13-201ENST00000337354 DLEU1O43261 78 aa9.55□□□□□ -0.88
SEC13-201ENST00000337354 NDUFC2O95298 119 aa9.55□□□□□ -0.88
SEC13-201ENST00000337354 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
SEC13-201ENST00000337354 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
SEC13-201ENST00000337354 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
SEC13-201ENST00000337354 INAFM2P0DMQ5 153 aa9.54□□□□□ -0.88
SEC13-201ENST00000337354 LINC00308Q8TCZ7 52 aa9.54□□□□□ -0.88
SEC13-201ENST00000337354 LINC00167Q96N53 147 aa9.54□□□□□ -0.88
SEC13-201ENST00000337354 M0R378 163 aa9.53□□□□□ -0.88
SEC13-201ENST00000337354 IFITM1P13164 125 aa9.53□□□□□ -0.88
SEC13-201ENST00000337354 Q8NDZ9 215 aa9.53□□□□□ -0.88
SEC13-201ENST00000337354 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
SEC13-201ENST00000337354 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.88
SEC13-201ENST00000337354 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.88
SEC13-201ENST00000337354 SOSTDC1Q6X4U4 206 aa9.52□□□□□ -0.88
SEC13-201ENST00000337354 PSORS1C2Q9UIG4 136 aa9.52□□□□□ -0.88
SEC13-201ENST00000337354 FAT1Q14517 4588 aa9.52□□□□□ -0.89
SEC13-201ENST00000337354 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
SEC13-201ENST00000337354 NPC2P61916 151 aa9.51□□□□□ -0.89
SEC13-201ENST00000337354 SPANXB1Q9NS25 103 aaPredicted RBP9.51□□□□□ -0.89
SEC13-201ENST00000337354 IGLV1-50A0A075B6I6 118 aa9.5□□□□□ -0.89
SEC13-201ENST00000337354 GAGE10A6NGK3 116 aa9.5□□□□□ -0.89
SEC13-201ENST00000337354 S100A12P80511 92 aa9.5□□□□□ -0.89
SEC13-201ENST00000337354 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
SEC13-201ENST00000337354 C14orf144Q96I85 54 aa9.5□□□□□ -0.89
SEC13-201ENST00000337354 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
SEC13-201ENST00000337354 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
SEC13-201ENST00000337354 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
SEC13-201ENST00000337354 SLC25A34Q6PIV7 304 aa9.5□□□□□ -0.89
SEC13-201ENST00000337354 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
SEC13-201ENST00000337354 VPS13BQ7Z7G8 4022 aa9.48□□□□□ -0.89
SEC13-201ENST00000337354 MUSTN1Q8IVN3 82 aa9.48□□□□□ -0.89
SEC13-201ENST00000337354 LINC00518Q8N0U6 118 aa9.48□□□□□ -0.89
SEC13-201ENST00000337354 IGKV2-28A0A075B6P5 120 aa9.47□□□□□ -0.89
SEC13-201ENST00000337354 NCR3O14931 201 aa9.47□□□□□ -0.89
SEC13-201ENST00000337354 IGKV2D-28P01615 120 aa9.47□□□□□ -0.89
SEC13-201ENST00000337354 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
SEC13-201ENST00000337354 IGLV7-43P04211 117 aa9.45□□□□□ -0.9
SEC13-201ENST00000337354 LOC105371267A0A1B0GV96 52 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 BCE1O60756 84 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 SMIM6P0DI80 62 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 DDTP30046 118 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 S100A7L2Q5SY68 101 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 SPINK6Q6UWN8 80 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 KCNQ1DNQ9H478 68 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
SEC13-201ENST00000337354 SRRM2Q9UQ35 2752 aaKnown RBP9.43□□□□□ -0.9
SEC13-201ENST00000337354 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
SEC13-201ENST00000337354 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
SEC13-201ENST00000337354 HIST1H4GQ99525 98 aa9.43□□□□□ -0.9
SEC13-201ENST00000337354 TMEM126AQ9H061 195 aa9.43□□□□□ -0.9
SEC13-201ENST00000337354 FLG2Q5D862 2391 aaPredicted RBP9.42□□□□□ -0.9
SEC13-201ENST00000337354 PRYO14603 147 aa9.41□□□□□ -0.9
SEC13-201ENST00000337354 ZNF861PO60384 105 aa9.4□□□□□ -0.9
SEC13-201ENST00000337354 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
SEC13-201ENST00000337354 C2orf91Q6ZV80 131 aa9.4□□□□□ -0.9
SEC13-201ENST00000337354 UQCR10Q9UDW1 63 aa9.4□□□□□ -0.9
SEC13-201ENST00000337354 SPRR1AP35321 89 aa9.39□□□□□ -0.91
SEC13-201ENST00000337354 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
SEC13-201ENST00000337354 TAL2Q16559 108 aa9.39□□□□□ -0.91
SEC13-201ENST00000337354 OR13C6PQ8NH95 151 aa9.39□□□□□ -0.91
SEC13-201ENST00000337354 LINC00337Q8N6G1 96 aa9.38□□□□□ -0.91
SEC13-201ENST00000337354 TRAV13-2A0A0B4J235 113 aa9.37□□□□□ -0.91
SEC13-201ENST00000337354 A4D1N5 150 aa9.37□□□□□ -0.91
SEC13-201ENST00000337354 UBE2AP49459 152 aa9.37□□□□□ -0.91
SEC13-201ENST00000337354 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
SEC13-201ENST00000337354 TRAV23DV6A0A075B6W5 121 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms