RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 BEAN1Q3B7T3 259 aa11.34□□□□□ -0.59
NPHP3-201ENST00000337331 ZNF73O43830 326 aaPredicted RBP11.33□□□□□ -0.6
NPHP3-201ENST00000337331 C14orf177Q52M58 125 aa11.33□□□□□ -0.6
NPHP3-201ENST00000337331 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
NPHP3-201ENST00000337331 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.6
NPHP3-201ENST00000337331 OXLD1Q5BKU9 147 aa11.33□□□□□ -0.6
NPHP3-201ENST00000337331 COX17Q14061 63 aa11.33□□□□□ -0.6
NPHP3-201ENST00000337331 EYSQ5T1H1 3165 aa11.32□□□□□ -0.6
NPHP3-201ENST00000337331 Q8N9L7 120 aa11.32□□□□□ -0.6
NPHP3-201ENST00000337331 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
NPHP3-201ENST00000337331 A8MTW9 85 aa11.31□□□□□ -0.6
NPHP3-201ENST00000337331 IGHV4-30-4P0DP06 118 aa11.31□□□□□ -0.6
NPHP3-201ENST00000337331 LAMA1P25391 3075 aa11.31□□□□□ -0.6
NPHP3-201ENST00000337331 CENPEQ02224 2701 aa11.31□□□□□ -0.6
NPHP3-201ENST00000337331 RPL37AP8A6NKH3 93 aa11.29□□□□□ -0.6
NPHP3-201ENST00000337331 A6NED7 52 aa11.28□□□□□ -0.6
NPHP3-201ENST00000337331 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
NPHP3-201ENST00000337331 DSPP15924 2871 aaKnown RBP11.28□□□□□ -0.6
NPHP3-201ENST00000337331 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.27□□□□□ -0.61
NPHP3-201ENST00000337331 MGAM2Q2M2H8 2515 aa11.27□□□□□ -0.61
NPHP3-201ENST00000337331 IGKV4-1P06312 121 aa11.27□□□□□ -0.61
NPHP3-201ENST00000337331 C11orf72Q8NBR9 251 aa11.27□□□□□ -0.61
NPHP3-201ENST00000337331 WFDC10BQ8IUB3 73 aa11.26□□□□□ -0.61
NPHP3-201ENST00000337331 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
NPHP3-201ENST00000337331 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
NPHP3-201ENST00000337331 REV3LO60673 3130 aa11.25□□□□□ -0.61
NPHP3-201ENST00000337331 USP34Q70CQ2 3546 aa11.25□□□□□ -0.61
NPHP3-201ENST00000337331 PLAC8L1A1L4L8 177 aa11.24□□□□□ -0.61
NPHP3-201ENST00000337331 KLKP1Q107X0 134 aa11.24□□□□□ -0.61
NPHP3-201ENST00000337331 DHRS4-AS1Q9P1J3 65 aa11.24□□□□□ -0.61
NPHP3-201ENST00000337331 ATRQ13535 2644 aa11.24□□□□□ -0.61
NPHP3-201ENST00000337331 HECTD1Q9ULT8 2610 aa11.24□□□□□ -0.61
NPHP3-201ENST00000337331 IGLV5-45A0A087WSX0 123 aa11.23□□□□□ -0.61
NPHP3-201ENST00000337331 WFDC13Q8IUB5 93 aa11.23□□□□□ -0.61
NPHP3-201ENST00000337331 FRYLO94915 3013 aa11.23□□□□□ -0.61
NPHP3-201ENST00000337331 BCE1O60756 84 aa11.22□□□□□ -0.61
NPHP3-201ENST00000337331 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
NPHP3-201ENST00000337331 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
NPHP3-201ENST00000337331 ZNF292O60281 2723 aa11.21□□□□□ -0.61
NPHP3-201ENST00000337331 SPTBN5Q9NRC6 3674 aaKnown RBP11.2□□□□□ -0.62
NPHP3-201ENST00000337331 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
NPHP3-201ENST00000337331 A0A1B0GUV1 79 aa11.19□□□□□ -0.62
NPHP3-201ENST00000337331 CXCL6P80162 114 aa11.19□□□□□ -0.62
NPHP3-201ENST00000337331 MAST4O15021 2626 aa11.19□□□□□ -0.62
NPHP3-201ENST00000337331 WDFY4Q6ZS81 3184 aa11.19□□□□□ -0.62
NPHP3-201ENST00000337331 Q6ZTC4 211 aa11.18□□□□□ -0.62
NPHP3-201ENST00000337331 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
NPHP3-201ENST00000337331 PRR15LQ9BU68 103 aa11.17□□□□□ -0.62
NPHP3-201ENST00000337331 LINC00575Q6W349 94 aa11.16□□□□□ -0.62
NPHP3-201ENST00000337331 Q6ZQT0 140 aa11.16□□□□□ -0.62
NPHP3-201ENST00000337331 IGHV3OR16-9A0A0B4J2B5 98 aa11.15□□□□□ -0.62
NPHP3-201ENST00000337331 M0R2N4 97 aa11.14□□□□□ -0.63
NPHP3-201ENST00000337331 LYPD5Q6UWN5 251 aa11.14□□□□□ -0.63
NPHP3-201ENST00000337331 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
NPHP3-201ENST00000337331 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
NPHP3-201ENST00000337331 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
NPHP3-201ENST00000337331 MGAQ8IWI9 3026 aa11.13□□□□□ -0.63
NPHP3-201ENST00000337331 C1orf137Q5JT78 98 aa11.12□□□□□ -0.63
NPHP3-201ENST00000337331 CD164Q04900 197 aa11.09□□□□□ -0.63
NPHP3-201ENST00000337331 A8MUN3 132 aa11.08□□□□□ -0.64
NPHP3-201ENST00000337331 LINC00208Q96KT6 92 aa11.07□□□□□ -0.64
NPHP3-201ENST00000337331 SMIM29Q86T20 159 aa11.07□□□□□ -0.64
NPHP3-201ENST00000337331 AKAP13Q12802 2813 aa11.06□□□□□ -0.64
NPHP3-201ENST00000337331 COL27A1Q8IZC6 1860 aaPredicted RBP11.06□□□□□ -0.64
NPHP3-201ENST00000337331 IGLV9-49A0A0B4J1Y8 123 aa11.06□□□□□ -0.64
NPHP3-201ENST00000337331 Q6ZRU5 148 aa11.05□□□□□ -0.64
NPHP3-201ENST00000337331 C22orf24Q9Y442 160 aa11.03□□□□□ -0.64
NPHP3-201ENST00000337331 CASC2Q6XLA1 102 aa11.03□□□□□ -0.64
NPHP3-201ENST00000337331 LOC110117498A0A087WWA1 95 aa11.02□□□□□ -0.65
NPHP3-201ENST00000337331 DEFB116Q30KQ4 102 aa11.02□□□□□ -0.65
NPHP3-201ENST00000337331 FAM229BQ4G0N7 80 aa11.02□□□□□ -0.65
NPHP3-201ENST00000337331 OBSCN-AS1Q96MR7 158 aa11.01□□□□□ -0.65
NPHP3-201ENST00000337331 MYO15AQ9UKN7 3530 aa11□□□□□ -0.65
NPHP3-201ENST00000337331 FAM104AQ969W3 186 aa11□□□□□ -0.65
NPHP3-201ENST00000337331 FLNAP21333 2647 aaKnown RBP11□□□□□ -0.65
NPHP3-201ENST00000337331 REG3GQ6UW15 175 aa11□□□□□ -0.65
NPHP3-201ENST00000337331 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
NPHP3-201ENST00000337331 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
NPHP3-201ENST00000337331 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
NPHP3-201ENST00000337331 A0A087WSZ3 146 aa10.98□□□□□ -0.65
NPHP3-201ENST00000337331 KALRNO60229 2985 aa10.98□□□□□ -0.65
NPHP3-201ENST00000337331 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
NPHP3-201ENST00000337331 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
NPHP3-201ENST00000337331 TRAV22A0A0B4J277 110 aa10.97□□□□□ -0.65
NPHP3-201ENST00000337331 HCG22E2RYF7 251 aa10.96□□□□□ -0.65
NPHP3-201ENST00000337331 PRR15Q8IV56 129 aa10.95□□□□□ -0.66
NPHP3-201ENST00000337331 MAP1AP78559 2803 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-201ENST00000337331 ITPR3Q14573 2671 aa10.94□□□□□ -0.66
NPHP3-201ENST00000337331 TRBV7-4A0A0J9YYF1 115 aa10.93□□□□□ -0.66
NPHP3-201ENST00000337331 LY6G6CO95867 125 aa10.93□□□□□ -0.66
NPHP3-201ENST00000337331 ERC2-IT1O76042 136 aa10.93□□□□□ -0.66
NPHP3-201ENST00000337331 X6R8D5 127 aa10.93□□□□□ -0.66
NPHP3-201ENST00000337331 LIMD2Q9BT23 127 aa10.92□□□□□ -0.66
NPHP3-201ENST00000337331 Q9BRP9 147 aa10.92□□□□□ -0.66
NPHP3-201ENST00000337331 CFAP46Q8IYW2 2715 aa10.91□□□□□ -0.66
NPHP3-201ENST00000337331 PRLHP81277 87 aa10.91□□□□□ -0.66
NPHP3-201ENST00000337331 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
NPHP3-201ENST00000337331 KIAA0087Q14695 138 aa10.87□□□□□ -0.67
NPHP3-201ENST00000337331 TACC2O95359 2948 aa10.87□□□□□ -0.67
NPHP3-201ENST00000337331 KTN1-AS1Q86SY8 53 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms