RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TRACP01848 142 aa5.93□□□□□ -1.46
SNCA-201ENST00000336904 WIPF1O43516 503 aa5.92□□□□□ -1.46
SNCA-201ENST00000336904 CASC10Q5T4H9 136 aa5.92□□□□□ -1.46
SNCA-201ENST00000336904 PRR34Q9NV39 138 aa5.92□□□□□ -1.46
SNCA-201ENST00000336904 M0QXV9 152 aa5.91□□□□□ -1.46
SNCA-201ENST00000336904 GAGE2BQ13066 116 aa5.91□□□□□ -1.46
SNCA-201ENST00000336904 CAMK2N2Q96S95 79 aa5.91□□□□□ -1.46
SNCA-201ENST00000336904 ZNF561-AS1K7EIQ3 104 aa5.91□□□□□ -1.46
SNCA-201ENST00000336904 Q6ZRU5 148 aa5.91□□□□□ -1.46
SNCA-201ENST00000336904 ANAPC13Q9BS18 74 aa5.9□□□□□ -1.47
SNCA-201ENST00000336904 TRBV10-3A0A0K0K1G6 114 aa5.89□□□□□ -1.47
SNCA-201ENST00000336904 EGFEM1PQ0D2K5 195 aa5.89□□□□□ -1.47
SNCA-201ENST00000336904 C15orf56Q8N910 161 aa5.89□□□□□ -1.47
SNCA-201ENST00000336904 KLK5Q9Y337 293 aaPredicted RBP5.89□□□□□ -1.47
SNCA-201ENST00000336904 IGKV3D-7A0A0C4DH55 119 aa5.88□□□□□ -1.47
SNCA-201ENST00000336904 CXCL5P42830 114 aa5.88□□□□□ -1.47
SNCA-201ENST00000336904 C1orf43Q9BWL3 253 aa5.88□□□□□ -1.47
SNCA-201ENST00000336904 TMEM126AQ9H061 195 aa5.88□□□□□ -1.47
SNCA-201ENST00000336904 DNAH10Q8IVF4 4471 aa5.88□□□□□ -1.47
SNCA-201ENST00000336904 DNAH3Q8TD57 4116 aa5.88□□□□□ -1.47
SNCA-201ENST00000336904 HUWE1Q7Z6Z7 4374 aaKnown RBP5.88□□□□□ -1.47
SNCA-201ENST00000336904 K7EIL1 84 aa5.88□□□□□ -1.47
SNCA-201ENST00000336904 H0YGX0 51 aa5.87□□□□□ -1.47
SNCA-201ENST00000336904 SCGB1A1P11684 91 aa5.87□□□□□ -1.47
SNCA-201ENST00000336904 Q8N814 137 aa5.87□□□□□ -1.47
SNCA-201ENST00000336904 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
SNCA-201ENST00000336904 SDIM1Q6ZPB5 146 aa5.87□□□□□ -1.47
SNCA-201ENST00000336904 ORMDL1Q9P0S3 153 aa5.87□□□□□ -1.47
SNCA-201ENST00000336904 NHLRC4P0CG21 123 aaPredicted RBP5.86□□□□□ -1.47
SNCA-201ENST00000336904 COX17Q14061 63 aa5.86□□□□□ -1.47
SNCA-201ENST00000336904 LINC01600Q96MT4 127 aa5.86□□□□□ -1.47
SNCA-201ENST00000336904 NDUFV3P56181 108 aaKnown RBP5.86□□□□□ -1.47
SNCA-201ENST00000336904 Q6ZRP5 223 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 LINC00846Q9NV44 126 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 LINC00588Q9Y4M8 146 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 M0R2N4 97 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 A0A087WVE0 104 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 FAM236AA0A1B0GUQ0 79 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 FAM236BA0A1B0GV22 79 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 FAM168BA1KXE4 195 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 Q6ZQY7 126 aa5.85□□□□□ -1.47
SNCA-201ENST00000336904 DNAH7Q8WXX0 4024 aa5.84□□□□□ -1.47
SNCA-201ENST00000336904 LINC01561Q8N1V8 128 aa5.84□□□□□ -1.47
SNCA-201ENST00000336904 SRRM2Q9UQ35 2752 aaKnown RBP5.83□□□□□ -1.48
SNCA-201ENST00000336904 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
SNCA-201ENST00000336904 NDUFC2O95298 119 aa5.83□□□□□ -1.48
SNCA-201ENST00000336904 MDFIQ99750 246 aa5.83□□□□□ -1.48
SNCA-201ENST00000336904 LAMTOR3Q9UHA4 124 aa5.83□□□□□ -1.48
SNCA-201ENST00000336904 TRAV23DV6A0A075B6W5 121 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 B5MCH6 92 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 INAFM2P0DMQ5 153 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 SERTAD4-AS1Q5TG53 156 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 LINC00575Q6W349 94 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 PPDPFQ9H3Y8 114 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 FAM240AA0A1B0GVK7 77 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 hADV29S1A0JD25 119 aa5.82□□□□□ -1.48
SNCA-201ENST00000336904 IGLV6-57P01721 117 aa5.81□□□□□ -1.48
SNCA-201ENST00000336904 VPREB1P12018 145 aa5.81□□□□□ -1.48
SNCA-201ENST00000336904 LINC01556Q5JQF7 62 aa5.81□□□□□ -1.48
SNCA-201ENST00000336904 DEFB105AQ8NG35 78 aa5.81□□□□□ -1.48
SNCA-201ENST00000336904 ZNF73O43830 326 aaPredicted RBP5.8□□□□□ -1.48
SNCA-201ENST00000336904 SYCNQ0VAF6 134 aa5.8□□□□□ -1.48
SNCA-201ENST00000336904 USP17L23D6RBM5 183 aa5.8□□□□□ -1.48
SNCA-201ENST00000336904 SS18L2Q9UHA2 77 aa5.8□□□□□ -1.48
SNCA-201ENST00000336904 NDUFC2-KCTD14E9PQ53 114 aa5.8□□□□□ -1.48
SNCA-201ENST00000336904 H3BNG1 76 aa5.8□□□□□ -1.48
SNCA-201ENST00000336904 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
SNCA-201ENST00000336904 DNAH9Q9NYC9 4486 aa5.79□□□□□ -1.48
SNCA-201ENST00000336904 TRAV10A0A0B4J240 114 aa5.79□□□□□ -1.48
SNCA-201ENST00000336904 KRTAP1-5Q9BYS1 174 aa5.79□□□□□ -1.48
SNCA-201ENST00000336904 HIST1H4AP62805 103 aaKnown RBP5.79□□□□□ -1.48
SNCA-201ENST00000336904 FAM19A5Q7Z5A7 132 aaPredicted RBP5.78□□□□□ -1.48
SNCA-201ENST00000336904 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
SNCA-201ENST00000336904 C3orf22Q8N5N4 141 aa5.78□□□□□ -1.48
SNCA-201ENST00000336904 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.78□□□□□ -1.48
SNCA-201ENST00000336904 TM2D3Q9BRN9 247 aa5.78□□□□□ -1.48
SNCA-201ENST00000336904 GVQW2A0A096LPI5 108 aaPredicted RBP5.77□□□□□ -1.49
SNCA-201ENST00000336904 TMEM256-PLSCR3K7ERE1 68 aa5.77□□□□□ -1.49
SNCA-201ENST00000336904 ACYP1P07311 99 aa5.77□□□□□ -1.49
SNCA-201ENST00000336904 FUSP35637 526 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNCA-201ENST00000336904 SCXQ7RTU7 201 aa5.77□□□□□ -1.49
SNCA-201ENST00000336904 OBSCN-AS1Q96MR7 158 aa5.77□□□□□ -1.49
SNCA-201ENST00000336904 IGKV2-24A0A0C4DH68 120 aa5.77□□□□□ -1.49
SNCA-201ENST00000336904 COX7BP24311 80 aa5.77□□□□□ -1.49
SNCA-201ENST00000336904 DNAH10OSP0CZ25 163 aa5.77□□□□□ -1.49
SNCA-201ENST00000336904 TRBV7-7A0A0K0K1E9 115 aa5.76□□□□□ -1.49
SNCA-201ENST00000336904 NKAPP1Q8N9T2 125 aa5.76□□□□□ -1.49
SNCA-201ENST00000336904 CCKP06307 115 aa5.76□□□□□ -1.49
SNCA-201ENST00000336904 FAM19A1Q7Z5A9 133 aa5.76□□□□□ -1.49
SNCA-201ENST00000336904 C7orf33Q8WU49 177 aa5.76□□□□□ -1.49
SNCA-201ENST00000336904 LINC00167Q96N53 147 aa5.76□□□□□ -1.49
SNCA-201ENST00000336904 RBM3P98179 157 aaKnown RBP5.75□□□□□ -1.49
SNCA-201ENST00000336904 TGP01266 2768 aa5.75□□□□□ -1.49
SNCA-201ENST00000336904 M0R378 163 aa5.74□□□□□ -1.49
SNCA-201ENST00000336904 Q6Q795 121 aa5.74□□□□□ -1.49
SNCA-201ENST00000336904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.74□□□□□ -1.49
SNCA-201ENST00000336904 DNAH1Q9P2D7 4330 aa5.74□□□□□ -1.49
SNCA-201ENST00000336904 ELOF1P60002 83 aaKnown RBP5.74□□□□□ -1.49
SNCA-201ENST00000336904 KRTAP7-1Q8IUC3 87 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms