RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 DAD1P61803 113 aa13.53□□□□□ -0.24
CDCA4-201ENST00000336219 OXTP01178 125 aa13.52□□□□□ -0.24
CDCA4-201ENST00000336219 DPH3Q96FX2 82 aa13.52□□□□□ -0.24
CDCA4-201ENST00000336219 S100A7L2Q5SY68 101 aa13.52□□□□□ -0.25
CDCA4-201ENST00000336219 APOC4P55056 127 aa13.51□□□□□ -0.25
CDCA4-201ENST00000336219 TMEM258P61165 79 aa13.5□□□□□ -0.25
CDCA4-201ENST00000336219 UNQ6190/PRO20217Q6UXQ8 127 aa13.5□□□□□ -0.25
CDCA4-201ENST00000336219 FASNP49327 2511 aaKnown RBP13.5□□□□□ -0.25
CDCA4-201ENST00000336219 LINC00575Q6W349 94 aa13.5□□□□□ -0.25
CDCA4-201ENST00000336219 CELA1Q9UNI1 258 aa13.5□□□□□ -0.25
CDCA4-201ENST00000336219 HELZ2Q9BYK8 2649 aaKnown RBP13.49□□□□□ -0.25
CDCA4-201ENST00000336219 Q8NAQ8 132 aa13.48□□□□□ -0.25
CDCA4-201ENST00000336219 UBL5Q9BZL1 73 aa13.48□□□□□ -0.25
CDCA4-201ENST00000336219 RPS28P62857 69 aaKnown RBP13.47□□□□□ -0.25
CDCA4-201ENST00000336219 LYPD5Q6UWN5 251 aa13.47□□□□□ -0.25
CDCA4-201ENST00000336219 Q6ZQT0 140 aa13.46□□□□□ -0.25
CDCA4-201ENST00000336219 LAMTOR3Q9UHA4 124 aa13.46□□□□□ -0.25
CDCA4-201ENST00000336219 ATP5EP2Q5VTU8 51 aa13.45□□□□□ -0.26
CDCA4-201ENST00000336219 MIFP14174 115 aa13.45□□□□□ -0.26
CDCA4-201ENST00000336219 RBM3P98179 157 aaKnown RBP13.45□□□□□ -0.26
CDCA4-201ENST00000336219 LELP1Q5T871 98 aa13.44□□□□□ -0.26
CDCA4-201ENST00000336219 SPAG11BQ08648 103 aa13.43□□□□□ -0.26
CDCA4-201ENST00000336219 C20orf197Q8N268 126 aa13.43□□□□□ -0.26
CDCA4-201ENST00000336219 HTN3P15516 51 aa13.42□□□□□ -0.26
CDCA4-201ENST00000336219 SPART-AS1P0CW21 52 aa13.42□□□□□ -0.26
CDCA4-201ENST00000336219 Q6ZQY7 126 aa13.41□□□□□ -0.26
CDCA4-201ENST00000336219 CYSRT1A8MQ03 144 aa13.41□□□□□ -0.26
CDCA4-201ENST00000336219 ZNF561-AS1K7EIQ3 104 aa13.41□□□□□ -0.26
CDCA4-201ENST00000336219 INAFM1C9JVW0 142 aa13.4□□□□□ -0.26
CDCA4-201ENST00000336219 HAMPP81172 84 aa13.4□□□□□ -0.26
CDCA4-201ENST00000336219 MUC7Q8TAX7 377 aa13.4□□□□□ -0.26
CDCA4-201ENST00000336219 PRR34Q9NV39 138 aa13.4□□□□□ -0.26
CDCA4-201ENST00000336219 A0A0J9YWU9 116 aa13.39□□□□□ -0.27
CDCA4-201ENST00000336219 IGHV4-30-4P0DP06 118 aa13.39□□□□□ -0.27
CDCA4-201ENST00000336219 KLK12Q9UKR0 248 aa13.39□□□□□ -0.27
CDCA4-201ENST00000336219 TENM1Q9UKZ4 2725 aa13.38□□□□□ -0.27
CDCA4-201ENST00000336219 XAGE1AQ9HD64 81 aa13.38□□□□□ -0.27
CDCA4-201ENST00000336219 LINC01547P58512 204 aaPredicted RBP13.38□□□□□ -0.27
CDCA4-201ENST00000336219 KMT2BQ9UMN6 2715 aaPredicted RBP13.37□□□□□ -0.27
CDCA4-201ENST00000336219 IGLV6-57P01721 117 aa13.37□□□□□ -0.27
CDCA4-201ENST00000336219 NOTCH2Q04721 2471 aa13.37□□□□□ -0.27
CDCA4-201ENST00000336219 Q6ZVQ6 151 aa13.37□□□□□ -0.27
CDCA4-201ENST00000336219 LOC110117498A0A087WWA1 95 aa13.36□□□□□ -0.27
CDCA4-201ENST00000336219 TRBV10-3A0A0K0K1G6 114 aa13.36□□□□□ -0.27
CDCA4-201ENST00000336219 TRAV10A0A0B4J240 114 aa13.36□□□□□ -0.27
CDCA4-201ENST00000336219 C5orf47Q569G3 176 aa13.35□□□□□ -0.27
CDCA4-201ENST00000336219 C4orf26Q17RF5 130 aa13.35□□□□□ -0.27
CDCA4-201ENST00000336219 NSD1Q96L73 2696 aaPredicted RBP13.33□□□□□ -0.28
CDCA4-201ENST00000336219 SCXQ7RTU7 201 aa13.33□□□□□ -0.28
CDCA4-201ENST00000336219 OTOGQ6ZRI0 2925 aa13.32□□□□□ -0.28
CDCA4-201ENST00000336219 GVQW2A0A096LPI5 108 aaPredicted RBP13.32□□□□□ -0.28
CDCA4-201ENST00000336219 C6orf48Q9UBA6 75 aa13.32□□□□□ -0.28
CDCA4-201ENST00000336219 Q5XG85 94 aa13.3□□□□□ -0.28
CDCA4-201ENST00000336219 SNURFQ9Y675 71 aa13.29□□□□□ -0.28
CDCA4-201ENST00000336219 HIVEP1P15822 2718 aa13.28□□□□□ -0.28
CDCA4-201ENST00000336219 DIRC1Q969H9 104 aa13.28□□□□□ -0.28
CDCA4-201ENST00000336219 WIPF1O43516 503 aa13.27□□□□□ -0.29
CDCA4-201ENST00000336219 HECTD1Q9ULT8 2610 aa13.27□□□□□ -0.29
CDCA4-201ENST00000336219 HRCT1Q6UXD1 115 aa13.27□□□□□ -0.29
CDCA4-201ENST00000336219 ATRQ13535 2644 aa13.26□□□□□ -0.29
CDCA4-201ENST00000336219 TRAV7A0A075B6U4 112 aa13.26□□□□□ -0.29
CDCA4-201ENST00000336219 H7BZZ5 65 aa13.26□□□□□ -0.29
CDCA4-201ENST00000336219 HIGD2BQ4VC39 106 aa13.26□□□□□ -0.29
CDCA4-201ENST00000336219 FAM236DA0A1B0GTK5 79 aa13.26□□□□□ -0.29
CDCA4-201ENST00000336219 FAM236CP0DP71 79 aa13.26□□□□□ -0.29
CDCA4-201ENST00000336219 TEP1Q99973 2627 aaKnown RBP13.25□□□□□ -0.29
CDCA4-201ENST00000336219 ZNF73O43830 326 aaPredicted RBP13.25□□□□□ -0.29
CDCA4-201ENST00000336219 RMI2Q96E14 147 aa13.25□□□□□ -0.29
CDCA4-201ENST00000336219 NDUFC2-KCTD14E9PQ53 114 aa13.24□□□□□ -0.29
CDCA4-201ENST00000336219 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
CDCA4-201ENST00000336219 COX7BP24311 80 aa13.23□□□□□ -0.29
CDCA4-201ENST00000336219 WFDC10BQ8IUB3 73 aa13.22□□□□□ -0.29
CDCA4-201ENST00000336219 TRBV7-4A0A0J9YYF1 115 aa13.21□□□□□ -0.29
CDCA4-201ENST00000336219 TM2D3Q9BRN9 247 aa13.2□□□□□ -0.3
CDCA4-201ENST00000336219 CXCL6P80162 114 aa13.2□□□□□ -0.3
CDCA4-201ENST00000336219 KPRPQ5T749 579 aaPredicted RBP13.2□□□□□ -0.3
CDCA4-201ENST00000336219 ELOF1P60002 83 aaKnown RBP13.19□□□□□ -0.3
CDCA4-201ENST00000336219 H3BNG1 76 aa13.19□□□□□ -0.3
CDCA4-201ENST00000336219 KRTAP26-1Q6PEX3 210 aa13.19□□□□□ -0.3
CDCA4-201ENST00000336219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.18□□□□□ -0.3
CDCA4-201ENST00000336219 CAMK2N2Q96S95 79 aa13.18□□□□□ -0.3
CDCA4-201ENST00000336219 PDE6GP18545 87 aa13.18□□□□□ -0.3
CDCA4-201ENST00000336219 H3BQ85 93 aa13.17□□□□□ -0.3
CDCA4-201ENST00000336219 VPREB1P12018 145 aa13.17□□□□□ -0.3
CDCA4-201ENST00000336219 Q8N9L7 120 aa13.17□□□□□ -0.3
CDCA4-201ENST00000336219 RETNQ9HD89 108 aa13.17□□□□□ -0.3
CDCA4-201ENST00000336219 F8WEM9 126 aa13.16□□□□□ -0.3
CDCA4-201ENST00000336219 KLKP1Q107X0 134 aa13.16□□□□□ -0.3
CDCA4-201ENST00000336219 BCE1O60756 84 aa13.15□□□□□ -0.3
CDCA4-201ENST00000336219 EGFEM1PQ0D2K5 195 aa13.15□□□□□ -0.3
CDCA4-201ENST00000336219 Q6ZRU5 148 aa13.14□□□□□ -0.31
CDCA4-201ENST00000336219 Q6ZTC4 211 aa13.14□□□□□ -0.31
CDCA4-201ENST00000336219 C15orf56Q8N910 161 aa13.13□□□□□ -0.31
CDCA4-201ENST00000336219 PKD1L1Q8TDX9 2849 aa13.12□□□□□ -0.31
CDCA4-201ENST00000336219 TRBV7-6A0A0J9YX20 115 aa13.12□□□□□ -0.31
CDCA4-201ENST00000336219 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
CDCA4-201ENST00000336219 SERP1Q9Y6X1 66 aa13.11□□□□□ -0.31
CDCA4-201ENST00000336219 M0R378 163 aa13.1□□□□□ -0.31
CDCA4-201ENST00000336219 KRTAP10-11P60412 298 aa13.1□□□□□ -0.31
CDCA4-201ENST00000336219 ESRGQ1W209 222 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms