RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 HSPB8Q9UJY1 196 aa8.68□□□□□ -1.02
CTHRC1-201ENST00000330295 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 M0QXV9 152 aa8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 SERF1AO75920 110 aa8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 LEPROTL1O95214 131 aa8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 UBE2BP63146 152 aa8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 LBHQ53QV2 105 aaPredicted RBP8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 FAM19A2Q8N3H0 131 aa8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 RETNLBQ9BQ08 111 aa8.67□□□□□ -1.02
CTHRC1-201ENST00000330295 IGLV5-39A0A0G2JS06 123 aa8.66□□□□□ -1.02
CTHRC1-201ENST00000330295 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
CTHRC1-201ENST00000330295 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
CTHRC1-201ENST00000330295 XAGE1AQ9HD64 81 aa8.65□□□□□ -1.02
CTHRC1-201ENST00000330295 KRTAP4-1Q9BYQ7 146 aa8.64□□□□□ -1.03
CTHRC1-201ENST00000330295 H0Y8G0 127 aa8.63□□□□□ -1.03
CTHRC1-201ENST00000330295 KRTAP4-7Q9BYR0 210 aa8.63□□□□□ -1.03
CTHRC1-201ENST00000330295 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
CTHRC1-201ENST00000330295 CFC1BP0CG36 223 aa8.62□□□□□ -1.03
CTHRC1-201ENST00000330295 PFN2P35080 140 aa8.62□□□□□ -1.03
CTHRC1-201ENST00000330295 COX17Q14061 63 aa8.62□□□□□ -1.03
CTHRC1-201ENST00000330295 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
CTHRC1-201ENST00000330295 FABP4P15090 132 aa8.61□□□□□ -1.03
CTHRC1-201ENST00000330295 PLNP26678 52 aa8.61□□□□□ -1.03
CTHRC1-201ENST00000330295 NKAPP1Q8N9T2 125 aa8.61□□□□□ -1.03
CTHRC1-201ENST00000330295 TP73-AS1Q9UF72 201 aa8.61□□□□□ -1.03
CTHRC1-201ENST00000330295 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
CTHRC1-201ENST00000330295 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
CTHRC1-201ENST00000330295 ATP6V1G1O75348 118 aa8.6□□□□□ -1.03
CTHRC1-201ENST00000330295 SCO1O75880 301 aa8.6□□□□□ -1.03
CTHRC1-201ENST00000330295 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
CTHRC1-201ENST00000330295 MAP1LC3CQ9BXW4 147 aa8.6□□□□□ -1.03
CTHRC1-201ENST00000330295 LINC00587B1AMM8 73 aa8.59□□□□□ -1.03
CTHRC1-201ENST00000330295 HERVK_113P61574 105 aa8.59□□□□□ -1.03
CTHRC1-201ENST00000330295 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
CTHRC1-201ENST00000330295 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
CTHRC1-201ENST00000330295 DPM2O94777 84 aa8.58□□□□□ -1.04
CTHRC1-201ENST00000330295 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
CTHRC1-201ENST00000330295 KRTAP7-1Q8IUC3 87 aa8.58□□□□□ -1.04
CTHRC1-201ENST00000330295 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
CTHRC1-201ENST00000330295 NUPR1O60356 82 aa8.57□□□□□ -1.04
CTHRC1-201ENST00000330295 LINC00158P58513 81 aa8.57□□□□□ -1.04
CTHRC1-201ENST00000330295 LINC00310P59036 64 aa8.57□□□□□ -1.04
CTHRC1-201ENST00000330295 HERV-K104P63124 156 aa8.57□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BKO60814 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BJP06899 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BOP23527 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BBP33778 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BDP58876 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BCP62807 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST2H2BEQ16778 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BHQ93079 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BNQ99877 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 HIST1H2BMQ99879 126 aa8.56□□□□□ -1.04
CTHRC1-201ENST00000330295 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
CTHRC1-201ENST00000330295 MT1HP80294 61 aa8.55□□□□□ -1.04
CTHRC1-201ENST00000330295 MEIG1Q5JSS6 88 aa8.55□□□□□ -1.04
CTHRC1-201ENST00000330295 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
CTHRC1-201ENST00000330295 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
CTHRC1-201ENST00000330295 A0A087X002 238 aa8.54□□□□□ -1.04
CTHRC1-201ENST00000330295 IGKCP01834 107 aa8.54□□□□□ -1.04
CTHRC1-201ENST00000330295 TYMSOSQ8TAI1 123 aa8.54□□□□□ -1.04
CTHRC1-201ENST00000330295 NDUFA12Q9UI09 145 aa8.54□□□□□ -1.04
CTHRC1-201ENST00000330295 LEPROTO15243 131 aa8.53□□□□□ -1.04
CTHRC1-201ENST00000330295 S100A1P23297 94 aa8.53□□□□□ -1.04
CTHRC1-201ENST00000330295 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
CTHRC1-201ENST00000330295 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
CTHRC1-201ENST00000330295 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
CTHRC1-201ENST00000330295 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
CTHRC1-201ENST00000330295 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
CTHRC1-201ENST00000330295 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
CTHRC1-201ENST00000330295 RPL37AP8A6NKH3 93 aa8.51□□□□□ -1.05
CTHRC1-201ENST00000330295 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
CTHRC1-201ENST00000330295 NMUP48645 174 aa8.51□□□□□ -1.05
CTHRC1-201ENST00000330295 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
CTHRC1-201ENST00000330295 J3QQQ9 107 aa8.5□□□□□ -1.05
CTHRC1-201ENST00000330295 ZNF861PO60384 105 aa8.5□□□□□ -1.05
CTHRC1-201ENST00000330295 BCE1O60756 84 aa8.5□□□□□ -1.05
CTHRC1-201ENST00000330295 PMCHL2Q9BQD1 86 aa8.5□□□□□ -1.05
CTHRC1-201ENST00000330295 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
CTHRC1-201ENST00000330295 VPREB1P12018 145 aa8.49□□□□□ -1.05
CTHRC1-201ENST00000330295 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
CTHRC1-201ENST00000330295 UBE2AP49459 152 aa8.47□□□□□ -1.05
CTHRC1-201ENST00000330295 COA6Q5JTJ3 125 aaKnown RBP8.47□□□□□ -1.05
CTHRC1-201ENST00000330295 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
CTHRC1-201ENST00000330295 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 C20orf202A1L168 122 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 M0R378 163 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 SEC61BP60468 96 aaKnown RBP8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 S100A12P80511 92 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 KRTAP19-2Q3LHN2 52 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 LCE1DQ5T752 114 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.06
CTHRC1-201ENST00000330295 AKR1D1P51857 326 aa8.45□□□□□ -1.06
CTHRC1-201ENST00000330295 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
CTHRC1-201ENST00000330295 E9PLD3 99 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms