RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TMEM256-PLSCR3K7ERE1 68 aa15.02■□□□□ -0
PNKP-201ENST00000322344 WFDC10BQ8IUB3 73 aa15.02■□□□□ -0
PNKP-201ENST00000322344 ATRQ13535 2644 aa15.02■□□□□ -0
PNKP-201ENST00000322344 JMJD7-PLA2G4BH0Y9G9 81 aa15.02□□□□□ -0.01
PNKP-201ENST00000322344 Q6ZTC4 211 aa15.02□□□□□ -0.01
PNKP-201ENST00000322344 C6orf48Q9UBA6 75 aa15□□□□□ -0.01
PNKP-201ENST00000322344 IGLV6-57P01721 117 aa14.99□□□□□ -0.01
PNKP-201ENST00000322344 KRTAP24-1Q3LI83 254 aa14.99□□□□□ -0.01
PNKP-201ENST00000322344 LINC00575Q6W349 94 aa14.99□□□□□ -0.01
PNKP-201ENST00000322344 ZNF561-AS1K7EIQ3 104 aa14.97□□□□□ -0.01
PNKP-201ENST00000322344 KRTAP26-1Q6PEX3 210 aa14.97□□□□□ -0.01
PNKP-201ENST00000322344 C3orf56Q8N813 242 aa14.97□□□□□ -0.01
PNKP-201ENST00000322344 RPL18AQ02543 176 aaKnown RBP14.96□□□□□ -0.01
PNKP-201ENST00000322344 CCKP06307 115 aa14.95□□□□□ -0.02
PNKP-201ENST00000322344 ESRGQ1W209 222 aa14.94□□□□□ -0.02
PNKP-201ENST00000322344 CAMK2N2Q96S95 79 aa14.93□□□□□ -0.02
PNKP-201ENST00000322344 TRRAPQ9Y4A5 3859 aa14.93□□□□□ -0.02
PNKP-201ENST00000322344 FAM236AA0A1B0GUQ0 79 aa14.93□□□□□ -0.02
PNKP-201ENST00000322344 FAM236BA0A1B0GV22 79 aa14.93□□□□□ -0.02
PNKP-201ENST00000322344 hADV29S1A0JD25 119 aa14.93□□□□□ -0.02
PNKP-201ENST00000322344 C2orf48Q96LS8 159 aa14.92□□□□□ -0.02
PNKP-201ENST00000322344 Q6JHZ5 121 aa14.92□□□□□ -0.02
PNKP-201ENST00000322344 LINC00846Q9NV44 126 aa14.92□□□□□ -0.02
PNKP-201ENST00000322344 DEFB131BA0A096LNP1 70 aa14.91□□□□□ -0.02
PNKP-201ENST00000322344 LINC01556Q5JQF7 62 aa14.91□□□□□ -0.02
PNKP-201ENST00000322344 HIGD2BQ4VC39 106 aa14.9□□□□□ -0.02
PNKP-201ENST00000322344 C11orf45Q8TAV5 145 aa14.9□□□□□ -0.02
PNKP-201ENST00000322344 F8WDY8 70 aa14.9□□□□□ -0.02
PNKP-201ENST00000322344 H3BQ85 93 aa14.9□□□□□ -0.02
PNKP-201ENST00000322344 CCDC179H3BU77 68 aa14.9□□□□□ -0.02
PNKP-201ENST00000322344 C1orf43Q9BWL3 253 aa14.89□□□□□ -0.03
PNKP-201ENST00000322344 XAGE1AQ9HD64 81 aa14.89□□□□□ -0.03
PNKP-201ENST00000322344 TRAV23DV6A0A075B6W5 121 aa14.88□□□□□ -0.03
PNKP-201ENST00000322344 TRBV10-3A0A0K0K1G6 114 aa14.88□□□□□ -0.03
PNKP-201ENST00000322344 C15orf56Q8N910 161 aa14.88□□□□□ -0.03
PNKP-201ENST00000322344 DIRC1Q969H9 104 aa14.87□□□□□ -0.03
PNKP-201ENST00000322344 B5MCH6 92 aa14.85□□□□□ -0.03
PNKP-201ENST00000322344 Q6ZRU5 148 aa14.85□□□□□ -0.03
PNKP-201ENST00000322344 VPREB1P12018 145 aa14.84□□□□□ -0.03
PNKP-201ENST00000322344 TRBV7-6A0A0J9YX20 115 aa14.83□□□□□ -0.03
PNKP-201ENST00000322344 NDUFC2-KCTD14E9PQ53 114 aa14.83□□□□□ -0.03
PNKP-201ENST00000322344 M0R378 163 aa14.82□□□□□ -0.04
PNKP-201ENST00000322344 ZNF73O43830 326 aaPredicted RBP14.82□□□□□ -0.04
PNKP-201ENST00000322344 IGKV2D-24A0A075B6R9 120 aa14.81□□□□□ -0.04
PNKP-201ENST00000322344 COX7BP24311 80 aa14.8□□□□□ -0.04
PNKP-201ENST00000322344 RBM3P98179 157 aaKnown RBP14.8□□□□□ -0.04
PNKP-201ENST00000322344 GHRHP01286 108 aa14.8□□□□□ -0.04
PNKP-201ENST00000322344 DNAH10OSP0CZ25 163 aa14.8□□□□□ -0.04
PNKP-201ENST00000322344 HIST1H4AP62805 103 aaKnown RBP14.8□□□□□ -0.04
PNKP-201ENST00000322344 IGKV3D-7A0A0C4DH55 119 aa14.79□□□□□ -0.04
PNKP-201ENST00000322344 LOC110117498A0A087WWA1 95 aa14.78□□□□□ -0.04
PNKP-201ENST00000322344 Q6ZQY7 126 aa14.78□□□□□ -0.04
PNKP-201ENST00000322344 ELOF1P60002 83 aaKnown RBP14.78□□□□□ -0.04
PNKP-201ENST00000322344 ATP5EP2Q5VTU8 51 aa14.78□□□□□ -0.04
PNKP-201ENST00000322344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.78□□□□□ -0.04
PNKP-201ENST00000322344 LAMTOR3Q9UHA4 124 aa14.78□□□□□ -0.04
PNKP-201ENST00000322344 F8P00451 2351 aa14.76□□□□□ -0.05
PNKP-201ENST00000322344 TRAV10A0A0B4J240 114 aa14.76□□□□□ -0.05
PNKP-201ENST00000322344 SYCNQ0VAF6 134 aa14.76□□□□□ -0.05
PNKP-201ENST00000322344 Q6ZQT0 140 aa14.75□□□□□ -0.05
PNKP-201ENST00000322344 ATOX1O00244 68 aa14.75□□□□□ -0.05
PNKP-201ENST00000322344 PDE6GP18545 87 aa14.74□□□□□ -0.05
PNKP-201ENST00000322344 UBL5Q9BZL1 73 aa14.73□□□□□ -0.05
PNKP-201ENST00000322344 Q6ZRP5 223 aa14.72□□□□□ -0.05
PNKP-201ENST00000322344 SS18L2Q9UHA2 77 aa14.72□□□□□ -0.05
PNKP-201ENST00000322344 DSCR8Q96T75 97 aa14.71□□□□□ -0.05
PNKP-201ENST00000322344 UQCRQO14949 82 aa14.71□□□□□ -0.05
PNKP-201ENST00000322344 C3orf22Q8N5N4 141 aa14.71□□□□□ -0.05
PNKP-201ENST00000322344 CMYA5Q8N3K9 4069 aa14.7□□□□□ -0.06
PNKP-201ENST00000322344 TM2D3Q9BRN9 247 aa14.68□□□□□ -0.06
PNKP-201ENST00000322344 DNAH3Q8TD57 4116 aa14.67□□□□□ -0.06
PNKP-201ENST00000322344 TLX1NBP0CAT3 122 aa14.66□□□□□ -0.06
PNKP-201ENST00000322344 COX7CP15954 63 aa14.66□□□□□ -0.06
PNKP-201ENST00000322344 LINC00528Q8N1L1 170 aa14.66□□□□□ -0.06
PNKP-201ENST00000322344 LINC00588Q9Y4M8 146 aa14.66□□□□□ -0.06
PNKP-201ENST00000322344 A0A087WVE0 104 aa14.63□□□□□ -0.07
PNKP-201ENST00000322344 C9orf153Q5TBE3 101 aa14.63□□□□□ -0.07
PNKP-201ENST00000322344 NKAPP1Q8N9T2 125 aa14.63□□□□□ -0.07
PNKP-201ENST00000322344 RMI2Q96E14 147 aa14.63□□□□□ -0.07
PNKP-201ENST00000322344 MRAPQ8TCY5 172 aa14.63□□□□□ -0.07
PNKP-201ENST00000322344 PLA2G2DQ9UNK4 145 aa14.62□□□□□ -0.07
PNKP-201ENST00000322344 KCNQ1DNQ9H478 68 aa14.61□□□□□ -0.07
PNKP-201ENST00000322344 TRBV7-4A0A0J9YYF1 115 aa14.61□□□□□ -0.07
PNKP-201ENST00000322344 USP17L23D6RBM5 183 aa14.61□□□□□ -0.07
PNKP-201ENST00000322344 FBN1P35555 2871 aaKnown RBP14.59□□□□□ -0.07
PNKP-201ENST00000322344 ANK2Q01484 3957 aa14.59□□□□□ -0.07
PNKP-201ENST00000322344 K7EIL1 84 aa14.58□□□□□ -0.08
PNKP-201ENST00000322344 TENM3Q9P273 2699 aa14.57□□□□□ -0.08
PNKP-201ENST00000322344 PRB2P02812 416 aaPredicted RBP14.57□□□□□ -0.08
PNKP-201ENST00000322344 SERTAD4-AS1Q5TG53 156 aa14.57□□□□□ -0.08
PNKP-201ENST00000322344 C7orf33Q8WU49 177 aa14.57□□□□□ -0.08
PNKP-201ENST00000322344 M0R2N4 97 aa14.56□□□□□ -0.08
PNKP-201ENST00000322344 SERP2Q8N6R1 65 aa14.56□□□□□ -0.08
PNKP-201ENST00000322344 UPK3BQ9BT76 320 aa14.56□□□□□ -0.08
PNKP-201ENST00000322344 IGLV5-37A0A075B6J1 123 aa14.54□□□□□ -0.08
PNKP-201ENST00000322344 CRYGAP11844 174 aa14.54□□□□□ -0.08
PNKP-201ENST00000322344 Q6ZVQ6 151 aa14.54□□□□□ -0.08
PNKP-201ENST00000322344 FAM19A1Q7Z5A9 133 aa14.53□□□□□ -0.08
PNKP-201ENST00000322344 STAB1Q9NY15 2570 aa14.52□□□□□ -0.08
PNKP-201ENST00000322344 LINC01547P58512 204 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms