RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 DIRC1Q969H9 104 aa8.63□□□□□ -1.03
RPP40-201ENST00000319533 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
RPP40-201ENST00000319533 F8VRH5 84 aa8.62□□□□□ -1.03
RPP40-201ENST00000319533 C11orf86A6NJI1 115 aa8.61□□□□□ -1.03
RPP40-201ENST00000319533 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
RPP40-201ENST00000319533 SMIM6P0DI80 62 aa8.61□□□□□ -1.03
RPP40-201ENST00000319533 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
RPP40-201ENST00000319533 PRR26Q8N8Z3 221 aa8.61□□□□□ -1.03
RPP40-201ENST00000319533 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
RPP40-201ENST00000319533 C20orf202A1L168 122 aa8.6□□□□□ -1.03
RPP40-201ENST00000319533 H0Y9J4 135 aa8.6□□□□□ -1.03
RPP40-201ENST00000319533 H3BRM9 83 aa8.6□□□□□ -1.03
RPP40-201ENST00000319533 IGLC3P0DOY3 106 aa8.6□□□□□ -1.03
RPP40-201ENST00000319533 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
RPP40-201ENST00000319533 IGLV5-45A0A087WSX0 123 aa8.59□□□□□ -1.03
RPP40-201ENST00000319533 DPM2O94777 84 aa8.59□□□□□ -1.03
RPP40-201ENST00000319533 IGKCP01834 107 aa8.59□□□□□ -1.03
RPP40-201ENST00000319533 CXCL5P42830 114 aa8.59□□□□□ -1.03
RPP40-201ENST00000319533 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
RPP40-201ENST00000319533 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
RPP40-201ENST00000319533 SMIM1B2RUZ4 78 aa8.58□□□□□ -1.04
RPP40-201ENST00000319533 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
RPP40-201ENST00000319533 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
RPP40-201ENST00000319533 LINC00518Q8N0U6 118 aa8.58□□□□□ -1.04
RPP40-201ENST00000319533 KRTAP7-1Q8IUC3 87 aa8.57□□□□□ -1.04
RPP40-201ENST00000319533 COX7B2Q8TF08 81 aa8.57□□□□□ -1.04
RPP40-201ENST00000319533 C12orf57Q99622 126 aa8.57□□□□□ -1.04
RPP40-201ENST00000319533 MUC2Q02817 5179 aa8.56□□□□□ -1.04
RPP40-201ENST00000319533 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
RPP40-201ENST00000319533 PLNP26678 52 aa8.56□□□□□ -1.04
RPP40-201ENST00000319533 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
RPP40-201ENST00000319533 FAM19A5Q7Z5A7 132 aaPredicted RBP8.56□□□□□ -1.04
RPP40-201ENST00000319533 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
RPP40-201ENST00000319533 M0QXV9 152 aa8.53□□□□□ -1.04
RPP40-201ENST00000319533 C9orf129Q5T035 196 aaKnown RBP8.53□□□□□ -1.04
RPP40-201ENST00000319533 VAMP8Q9BV40 100 aa8.53□□□□□ -1.04
RPP40-201ENST00000319533 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
RPP40-201ENST00000319533 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
RPP40-201ENST00000319533 SPATA45Q537H7 98 aa8.52□□□□□ -1.05
RPP40-201ENST00000319533 TMEM170BQ5T4T1 132 aa8.52□□□□□ -1.05
RPP40-201ENST00000319533 TP73-AS1Q9UF72 201 aa8.52□□□□□ -1.05
RPP40-201ENST00000319533 TSPEAR-AS2P59090 65 aa8.51□□□□□ -1.05
RPP40-201ENST00000319533 UBE2BP63146 152 aa8.51□□□□□ -1.05
RPP40-201ENST00000319533 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
RPP40-201ENST00000319533 RPL13AP40429 203 aaKnown RBP8.5□□□□□ -1.05
RPP40-201ENST00000319533 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
RPP40-201ENST00000319533 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
RPP40-201ENST00000319533 E9PLD3 99 aa8.48□□□□□ -1.05
RPP40-201ENST00000319533 SFTA2Q6UW10 78 aa8.48□□□□□ -1.05
RPP40-201ENST00000319533 PRO1933Q9H354 126 aa8.48□□□□□ -1.05
RPP40-201ENST00000319533 HSBP1L1C9JCN9 74 aa8.47□□□□□ -1.05
RPP40-201ENST00000319533 S100A12P80511 92 aa8.47□□□□□ -1.05
RPP40-201ENST00000319533 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
RPP40-201ENST00000319533 ZNF861PO60384 105 aa8.46□□□□□ -1.06
RPP40-201ENST00000319533 NMUP48645 174 aa8.46□□□□□ -1.06
RPP40-201ENST00000319533 HERVK_113P61574 105 aa8.46□□□□□ -1.06
RPP40-201ENST00000319533 PRR4Q16378 134 aa8.46□□□□□ -1.06
RPP40-201ENST00000319533 PCP2Q8IVA1 136 aa8.46□□□□□ -1.06
RPP40-201ENST00000319533 C22orf24Q9Y442 160 aa8.46□□□□□ -1.06
RPP40-201ENST00000319533 LEPROTO15243 131 aa8.45□□□□□ -1.06
RPP40-201ENST00000319533 C14orf144Q96I85 54 aa8.45□□□□□ -1.06
RPP40-201ENST00000319533 PFN2P35080 140 aa8.44□□□□□ -1.06
RPP40-201ENST00000319533 J3QQQ9 107 aa8.43□□□□□ -1.06
RPP40-201ENST00000319533 COX8AP10176 69 aa8.43□□□□□ -1.06
RPP40-201ENST00000319533 MRPL55Q7Z7F7 128 aaKnown RBP8.43□□□□□ -1.06
RPP40-201ENST00000319533 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
RPP40-201ENST00000319533 COX17Q14061 63 aa8.42□□□□□ -1.06
RPP40-201ENST00000319533 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
RPP40-201ENST00000319533 PLEKHB2Q96CS7 222 aa8.42□□□□□ -1.06
RPP40-201ENST00000319533 A0A0U1RQV1 116 aa8.41□□□□□ -1.06
RPP40-201ENST00000319533 BOD1L2Q8IYS8 172 aa8.41□□□□□ -1.06
RPP40-201ENST00000319533 ZNF625Q96I27 306 aaPredicted RBP8.41□□□□□ -1.06
RPP40-201ENST00000319533 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
RPP40-201ENST00000319533 C2orf91Q6ZV80 131 aa8.4□□□□□ -1.06
RPP40-201ENST00000319533 FAT4Q6V0I7 4981 aa8.4□□□□□ -1.07
RPP40-201ENST00000319533 IGLV5-37A0A075B6J1 123 aa8.39□□□□□ -1.07
RPP40-201ENST00000319533 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
RPP40-201ENST00000319533 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
RPP40-201ENST00000319533 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
RPP40-201ENST00000319533 H3BS24 57 aa8.38□□□□□ -1.07
RPP40-201ENST00000319533 DLEU1O43261 78 aa8.38□□□□□ -1.07
RPP40-201ENST00000319533 SLC25A34Q6PIV7 304 aa8.38□□□□□ -1.07
RPP40-201ENST00000319533 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
RPP40-201ENST00000319533 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
RPP40-201ENST00000319533 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
RPP40-201ENST00000319533 A0A087X002 238 aa8.37□□□□□ -1.07
RPP40-201ENST00000319533 GAGE10A6NGK3 116 aa8.37□□□□□ -1.07
RPP40-201ENST00000319533 RPL37AP8A6NKH3 93 aa8.37□□□□□ -1.07
RPP40-201ENST00000319533 TSTD3H0UI37 97 aa8.37□□□□□ -1.07
RPP40-201ENST00000319533 LINC00158P58513 81 aa8.37□□□□□ -1.07
RPP40-201ENST00000319533 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
RPP40-201ENST00000319533 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
RPP40-201ENST00000319533 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
RPP40-201ENST00000319533 BCE1O60756 84 aa8.36□□□□□ -1.07
RPP40-201ENST00000319533 TSPAN13O95857 204 aa8.36□□□□□ -1.07
RPP40-201ENST00000319533 RPL28P46779 137 aaKnown RBP8.36□□□□□ -1.07
RPP40-201ENST00000319533 HERV-K104P63124 156 aa8.36□□□□□ -1.07
RPP40-201ENST00000319533 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
RPP40-201ENST00000319533 LINC00587B1AMM8 73 aa8.35□□□□□ -1.07
RPP40-201ENST00000319533 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms