RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 PRR3P79522 188 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-201ENST00000319172 ESRGQ1W209 222 aa6.44□□□□□ -1.38
TMEM39A-201ENST00000319172 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
TMEM39A-201ENST00000319172 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
TMEM39A-201ENST00000319172 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
TMEM39A-201ENST00000319172 SLPIP03973 132 aa6.44□□□□□ -1.38
TMEM39A-201ENST00000319172 COX7BP24311 80 aa6.43□□□□□ -1.38
TMEM39A-201ENST00000319172 C6orf99Q4VX62 202 aa6.43□□□□□ -1.38
TMEM39A-201ENST00000319172 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
TMEM39A-201ENST00000319172 MXRA5Q9NR99 2828 aa6.43□□□□□ -1.38
TMEM39A-201ENST00000319172 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
TMEM39A-201ENST00000319172 FOXI1Q12951 378 aa6.42□□□□□ -1.38
TMEM39A-201ENST00000319172 IGLV5-39A0A0G2JS06 123 aa6.41□□□□□ -1.38
TMEM39A-201ENST00000319172 H3BT86 120 aa6.41□□□□□ -1.38
TMEM39A-201ENST00000319172 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
TMEM39A-201ENST00000319172 TEX49A0A1B0GTD5 131 aa6.4□□□□□ -1.38
TMEM39A-201ENST00000319172 NDUFB1O75438 58 aa6.4□□□□□ -1.38
TMEM39A-201ENST00000319172 NREPQ16612 68 aa6.4□□□□□ -1.38
TMEM39A-201ENST00000319172 K7EIL1 84 aa6.4□□□□□ -1.38
TMEM39A-201ENST00000319172 NHLRC4P0CG21 123 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-201ENST00000319172 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
TMEM39A-201ENST00000319172 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
TMEM39A-201ENST00000319172 RBM3P98179 157 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-201ENST00000319172 CD164Q04900 197 aa6.39□□□□□ -1.39
TMEM39A-201ENST00000319172 A0A0U1RQV1 116 aa6.38□□□□□ -1.39
TMEM39A-201ENST00000319172 RPL37AP8A6NKH3 93 aa6.38□□□□□ -1.39
TMEM39A-201ENST00000319172 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
TMEM39A-201ENST00000319172 NDUFV3P56181 108 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-201ENST00000319172 COX17Q14061 63 aa6.38□□□□□ -1.39
TMEM39A-201ENST00000319172 MDFIQ99750 246 aa6.38□□□□□ -1.39
TMEM39A-201ENST00000319172 TENM4Q6N022 2769 aa6.37□□□□□ -1.39
TMEM39A-201ENST00000319172 TMEM258P61165 79 aa6.37□□□□□ -1.39
TMEM39A-201ENST00000319172 LST1O00453 97 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 EGFEM1PQ0D2K5 195 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 TRAV23DV6A0A075B6W5 121 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 Q6ZRU5 148 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 LOC107984640A0A0U1RRK4 108 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 JMJD7-PLA2G4BH0Y9G9 81 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 TMEM256-PLSCR3K7ERE1 68 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 H0Y9J4 135 aa6.36□□□□□ -1.39
TMEM39A-201ENST00000319172 LINC01556Q5JQF7 62 aa6.35□□□□□ -1.39
TMEM39A-201ENST00000319172 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
TMEM39A-201ENST00000319172 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
TMEM39A-201ENST00000319172 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
TMEM39A-201ENST00000319172 LINC00612Q8N6U2 182 aa6.35□□□□□ -1.39
TMEM39A-201ENST00000319172 XGP55808 180 aa6.35□□□□□ -1.39
TMEM39A-201ENST00000319172 IGKV3D-7A0A0C4DH55 119 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 SOSTDC1Q6X4U4 206 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 Q6ZQY7 126 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 H3BNG1 76 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 M0R378 163 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 UQCRQO14949 82 aa6.34□□□□□ -1.39
TMEM39A-201ENST00000319172 IGLV5-52A0A0A0MRZ9 124 aa6.34□□□□□ -1.4
TMEM39A-201ENST00000319172 LINC00588Q9Y4M8 146 aa6.34□□□□□ -1.4
TMEM39A-201ENST00000319172 CELSR1Q9NYQ6 3014 aa6.33□□□□□ -1.4
TMEM39A-201ENST00000319172 ZNF73O43830 326 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-201ENST00000319172 LINC00336Q6ZUF6 198 aa6.33□□□□□ -1.4
TMEM39A-201ENST00000319172 NDUFC2-KCTD14E9PQ53 114 aa6.32□□□□□ -1.4
TMEM39A-201ENST00000319172 SPINK6Q6UWN8 80 aa6.32□□□□□ -1.4
TMEM39A-201ENST00000319172 IMUPQ9GZP8 106 aa6.32□□□□□ -1.4
TMEM39A-201ENST00000319172 H3BQ85 93 aa6.31□□□□□ -1.4
TMEM39A-201ENST00000319172 LINC01561Q8N1V8 128 aa6.31□□□□□ -1.4
TMEM39A-201ENST00000319172 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
TMEM39A-201ENST00000319172 EIF4EBP3O60516 100 aaPredicted RBP6.31□□□□□ -1.4
TMEM39A-201ENST00000319172 RPL28P46779 137 aaKnown RBP6.31□□□□□ -1.4
TMEM39A-201ENST00000319172 KMT2BQ9UMN6 2715 aaPredicted RBP6.31□□□□□ -1.4
TMEM39A-201ENST00000319172 A0A087WYN8 130 aa6.3□□□□□ -1.4
TMEM39A-201ENST00000319172 SERTAD4-AS1Q5TG53 156 aa6.3□□□□□ -1.4
TMEM39A-201ENST00000319172 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
TMEM39A-201ENST00000319172 ACYP1P07311 99 aa6.3□□□□□ -1.4
TMEM39A-201ENST00000319172 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
TMEM39A-201ENST00000319172 MUC7Q8TAX7 377 aa6.29□□□□□ -1.4
TMEM39A-201ENST00000319172 LITAFQ99732 161 aa6.29□□□□□ -1.4
TMEM39A-201ENST00000319172 HRCT1Q6UXD1 115 aa6.29□□□□□ -1.4
TMEM39A-201ENST00000319172 C3orf22Q8N5N4 141 aa6.29□□□□□ -1.4
TMEM39A-201ENST00000319172 IGLV9-49A0A0B4J1Y8 123 aa6.28□□□□□ -1.4
TMEM39A-201ENST00000319172 STAB2Q8WWQ8 2551 aa6.28□□□□□ -1.4
TMEM39A-201ENST00000319172 CCKP06307 115 aa6.28□□□□□ -1.4
TMEM39A-201ENST00000319172 PDE6GP18545 87 aa6.28□□□□□ -1.4
TMEM39A-201ENST00000319172 SPENQ96T58 3664 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-201ENST00000319172 BPY2O14599 106 aa6.27□□□□□ -1.4
TMEM39A-201ENST00000319172 TM2D3Q9BRN9 247 aa6.27□□□□□ -1.41
TMEM39A-201ENST00000319172 SVEP1Q4LDE5 3571 aa6.27□□□□□ -1.41
TMEM39A-201ENST00000319172 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
TMEM39A-201ENST00000319172 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
TMEM39A-201ENST00000319172 C3orf84H3BNL1 204 aa6.26□□□□□ -1.41
TMEM39A-201ENST00000319172 SCXQ7RTU7 201 aa6.25□□□□□ -1.41
TMEM39A-201ENST00000319172 Q8N814 137 aa6.25□□□□□ -1.41
TMEM39A-201ENST00000319172 DNAH10OSP0CZ25 163 aa6.25□□□□□ -1.41
TMEM39A-201ENST00000319172 FAM104AQ969W3 186 aa6.25□□□□□ -1.41
TMEM39A-201ENST00000319172 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
TMEM39A-201ENST00000319172 MP68P56378 58 aa6.24□□□□□ -1.41
TMEM39A-201ENST00000319172 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
TMEM39A-201ENST00000319172 PRR34Q9NV39 138 aa6.24□□□□□ -1.41
TMEM39A-201ENST00000319172 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
TMEM39A-201ENST00000319172 WWC2-AS2Q96NR7 200 aa6.24□□□□□ -1.41
TMEM39A-201ENST00000319172 ZNF706Q9Y5V0 76 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms