RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TRAV23DV6A0A075B6W5 121 aa12.9□□□□□ -0.34
RTN4-201ENST00000317610 CYSRT1A8MQ03 144 aa12.9□□□□□ -0.34
RTN4-201ENST00000317610 DEFB4AO15263 64 aa12.9□□□□□ -0.34
RTN4-201ENST00000317610 DAD1P61803 113 aa12.9□□□□□ -0.34
RTN4-201ENST00000317610 GVQW2A0A096LPI5 108 aaPredicted RBP12.89□□□□□ -0.35
RTN4-201ENST00000317610 H3BQ85 93 aa12.89□□□□□ -0.35
RTN4-201ENST00000317610 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
RTN4-201ENST00000317610 LELP1Q5T871 98 aa12.89□□□□□ -0.35
RTN4-201ENST00000317610 PRR34Q9NV39 138 aa12.89□□□□□ -0.35
RTN4-201ENST00000317610 GCN1Q92616 2671 aaKnown RBP12.88□□□□□ -0.35
RTN4-201ENST00000317610 BCE1O60756 84 aa12.87□□□□□ -0.35
RTN4-201ENST00000317610 LAMTOR3Q9UHA4 124 aa12.87□□□□□ -0.35
RTN4-201ENST00000317610 PDZD2O15018 2839 aa12.87□□□□□ -0.35
RTN4-201ENST00000317610 MTORP42345 2549 aa12.87□□□□□ -0.35
RTN4-201ENST00000317610 C9orf66Q5T8R8 295 aa12.87□□□□□ -0.35
RTN4-201ENST00000317610 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
RTN4-201ENST00000317610 CELA1Q9UNI1 258 aa12.86□□□□□ -0.35
RTN4-201ENST00000317610 ACANP16112 2415 aa12.86□□□□□ -0.35
RTN4-201ENST00000317610 PDE6GP18545 87 aa12.85□□□□□ -0.35
RTN4-201ENST00000317610 APOC4P55056 127 aa12.85□□□□□ -0.35
RTN4-201ENST00000317610 M0R2N4 97 aa12.85□□□□□ -0.35
RTN4-201ENST00000317610 Q6ZQY7 126 aa12.85□□□□□ -0.35
RTN4-201ENST00000317610 Q8NAQ8 132 aa12.85□□□□□ -0.35
RTN4-201ENST00000317610 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
RTN4-201ENST00000317610 LINC01547P58512 204 aaPredicted RBP12.83□□□□□ -0.36
RTN4-201ENST00000317610 DSCR8Q96T75 97 aa12.83□□□□□ -0.36
RTN4-201ENST00000317610 Q6ZVQ6 151 aa12.83□□□□□ -0.36
RTN4-201ENST00000317610 MIFP14174 115 aa12.82□□□□□ -0.36
RTN4-201ENST00000317610 NBEAL2Q6ZNJ1 2754 aa12.82□□□□□ -0.36
RTN4-201ENST00000317610 DIRC1Q969H9 104 aa12.82□□□□□ -0.36
RTN4-201ENST00000317610 C6orf48Q9UBA6 75 aa12.82□□□□□ -0.36
RTN4-201ENST00000317610 KLK12Q9UKR0 248 aa12.82□□□□□ -0.36
RTN4-201ENST00000317610 OXTP01178 125 aa12.81□□□□□ -0.36
RTN4-201ENST00000317610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.79□□□□□ -0.36
RTN4-201ENST00000317610 SPART-AS1P0CW21 52 aa12.79□□□□□ -0.36
RTN4-201ENST00000317610 CXCL6P80162 114 aa12.79□□□□□ -0.36
RTN4-201ENST00000317610 TRAV7A0A075B6U4 112 aa12.78□□□□□ -0.36
RTN4-201ENST00000317610 TRBV7-6A0A0J9YX20 115 aa12.77□□□□□ -0.36
RTN4-201ENST00000317610 TRBV7-4A0A0J9YYF1 115 aa12.77□□□□□ -0.36
RTN4-201ENST00000317610 ZNF73O43830 326 aaPredicted RBP12.77□□□□□ -0.37
RTN4-201ENST00000317610 C20orf197Q8N268 126 aa12.77□□□□□ -0.37
RTN4-201ENST00000317610 ELOF1P60002 83 aaKnown RBP12.76□□□□□ -0.37
RTN4-201ENST00000317610 HTN3P15516 51 aa12.76□□□□□ -0.37
RTN4-201ENST00000317610 COX7BP24311 80 aa12.76□□□□□ -0.37
RTN4-201ENST00000317610 HAMPP81172 84 aa12.76□□□□□ -0.37
RTN4-201ENST00000317610 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
RTN4-201ENST00000317610 C5orf47Q569G3 176 aa12.75□□□□□ -0.37
RTN4-201ENST00000317610 VPREB1P12018 145 aa12.73□□□□□ -0.37
RTN4-201ENST00000317610 SMR3AQ99954 134 aa12.72□□□□□ -0.37
RTN4-201ENST00000317610 TRAV10A0A0B4J240 114 aa12.71□□□□□ -0.37
RTN4-201ENST00000317610 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
RTN4-201ENST00000317610 TENM4Q6N022 2769 aa12.7□□□□□ -0.38
RTN4-201ENST00000317610 H7BZZ5 65 aa12.7□□□□□ -0.38
RTN4-201ENST00000317610 KLKP1Q107X0 134 aa12.7□□□□□ -0.38
RTN4-201ENST00000317610 FAM236DA0A1B0GTK5 79 aa12.69□□□□□ -0.38
RTN4-201ENST00000317610 FAM236CP0DP71 79 aa12.69□□□□□ -0.38
RTN4-201ENST00000317610 VWFP04275 2813 aa12.68□□□□□ -0.38
RTN4-201ENST00000317610 EGFEM1PQ0D2K5 195 aa12.68□□□□□ -0.38
RTN4-201ENST00000317610 KRTAP26-1Q6PEX3 210 aa12.68□□□□□ -0.38
RTN4-201ENST00000317610 M0R378 163 aa12.68□□□□□ -0.38
RTN4-201ENST00000317610 CAMK2N2Q96S95 79 aa12.67□□□□□ -0.38
RTN4-201ENST00000317610 Q5XG85 94 aa12.67□□□□□ -0.38
RTN4-201ENST00000317610 HIVEP2P31629 2446 aa12.66□□□□□ -0.38
RTN4-201ENST00000317610 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
RTN4-201ENST00000317610 HIGD2BQ4VC39 106 aa12.66□□□□□ -0.38
RTN4-201ENST00000317610 LINC00528Q8N1L1 170 aa12.66□□□□□ -0.38
RTN4-201ENST00000317610 ITPR2Q14571 2701 aa12.64□□□□□ -0.39
RTN4-201ENST00000317610 Q6ZRU5 148 aa12.63□□□□□ -0.39
RTN4-201ENST00000317610 WFDC10BQ8IUB3 73 aa12.63□□□□□ -0.39
RTN4-201ENST00000317610 H3BNG1 76 aa12.62□□□□□ -0.39
RTN4-201ENST00000317610 C15orf56Q8N910 161 aa12.62□□□□□ -0.39
RTN4-201ENST00000317610 SERP1Q9Y6X1 66 aa12.61□□□□□ -0.39
RTN4-201ENST00000317610 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
RTN4-201ENST00000317610 WIPF1O43516 503 aa12.59□□□□□ -0.39
RTN4-201ENST00000317610 C4orf26Q17RF5 130 aa12.59□□□□□ -0.39
RTN4-201ENST00000317610 RMI2Q96E14 147 aa12.58□□□□□ -0.4
RTN4-201ENST00000317610 KPRPQ5T749 579 aaPredicted RBP12.57□□□□□ -0.4
RTN4-201ENST00000317610 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
RTN4-201ENST00000317610 SNURFQ9Y675 71 aa12.57□□□□□ -0.4
RTN4-201ENST00000317610 F8WDY8 70 aa12.56□□□□□ -0.4
RTN4-201ENST00000317610 NDUFC1O43677 76 aa12.55□□□□□ -0.4
RTN4-201ENST00000317610 Q6ZRP5 223 aa12.55□□□□□ -0.4
RTN4-201ENST00000317610 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
RTN4-201ENST00000317610 F8WEM9 126 aa12.53□□□□□ -0.4
RTN4-201ENST00000317610 NREPQ16612 68 aa12.53□□□□□ -0.4
RTN4-201ENST00000317610 ERC2-IT1O76042 136 aa12.52□□□□□ -0.41
RTN4-201ENST00000317610 KCNQ1DNQ9H478 68 aa12.52□□□□□ -0.41
RTN4-201ENST00000317610 HIVEP1P15822 2718 aa12.52□□□□□ -0.41
RTN4-201ENST00000317610 BPY2O14599 106 aa12.51□□□□□ -0.41
RTN4-201ENST00000317610 IGKV4-1P06312 121 aa12.51□□□□□ -0.41
RTN4-201ENST00000317610 HRCT1Q6UXD1 115 aa12.51□□□□□ -0.41
RTN4-201ENST00000317610 INAFM1C9JVW0 142 aa12.51□□□□□ -0.41
RTN4-201ENST00000317610 J3QKU1 62 aa12.51□□□□□ -0.41
RTN4-201ENST00000317610 C1orf43Q9BWL3 253 aa12.5□□□□□ -0.41
RTN4-201ENST00000317610 NOTCH2Q04721 2471 aa12.5□□□□□ -0.41
RTN4-201ENST00000317610 ESRGQ1W209 222 aa12.49□□□□□ -0.41
RTN4-201ENST00000317610 TENM1Q9UKZ4 2725 aa12.48□□□□□ -0.41
RTN4-201ENST00000317610 SYCNQ0VAF6 134 aa12.48□□□□□ -0.41
RTN4-201ENST00000317610 LINC01556Q5JQF7 62 aa12.48□□□□□ -0.41
RTN4-201ENST00000317610 Q6ZTC4 211 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms