RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 A0A1B0GV72 72 aa5.08□□□□□ -1.6
CNOT4-201ENST00000315544 CCKP06307 115 aa5.08□□□□□ -1.6
CNOT4-201ENST00000315544 TRBV10-3A0A0K0K1G6 114 aa5.08□□□□□ -1.6
CNOT4-201ENST00000315544 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
CNOT4-201ENST00000315544 VPREB1P12018 145 aa5.08□□□□□ -1.6
CNOT4-201ENST00000315544 GAGE5Q13069 117 aa5.08□□□□□ -1.6
CNOT4-201ENST00000315544 GAGE6Q13070 117 aa5.08□□□□□ -1.6
CNOT4-201ENST00000315544 LYRM7Q5U5X0 104 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 CD164L2Q6UWJ8 174 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 PLA2G2DQ9UNK4 145 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 HIVEP2P31629 2446 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 SND1-IT1Q9HBX3 110 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 STAB1Q9NY15 2570 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 TMEM243Q9BU79 118 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 C6orf48Q9UBA6 75 aa5.07□□□□□ -1.6
CNOT4-201ENST00000315544 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
CNOT4-201ENST00000315544 TLX1NBP0CAT3 122 aa5.06□□□□□ -1.6
CNOT4-201ENST00000315544 CHCHD5Q9BSY4 110 aa5.06□□□□□ -1.6
CNOT4-201ENST00000315544 ATP5G1P05496 136 aa5.06□□□□□ -1.6
CNOT4-201ENST00000315544 LINC00528Q8N1L1 170 aa5.06□□□□□ -1.6
CNOT4-201ENST00000315544 LYRM9A8MSI8 78 aa5.05□□□□□ -1.6
CNOT4-201ENST00000315544 F5H697 171 aa5.05□□□□□ -1.6
CNOT4-201ENST00000315544 PRR3P79522 188 aaKnown RBP5.05□□□□□ -1.6
CNOT4-201ENST00000315544 TTC32Q5I0X7 151 aa5.05□□□□□ -1.6
CNOT4-201ENST00000315544 MEIG1Q5JSS6 88 aa5.05□□□□□ -1.6
CNOT4-201ENST00000315544 NOTCH3Q9UM47 2321 aa5.05□□□□□ -1.6
CNOT4-201ENST00000315544 IGLV5-48A0A075B6I7 105 aa5.05□□□□□ -1.6
CNOT4-201ENST00000315544 BCE1O60756 84 aa5.05□□□□□ -1.6
CNOT4-201ENST00000315544 ELOF1P60002 83 aaKnown RBP5.05□□□□□ -1.6
CNOT4-201ENST00000315544 TRAV13-2A0A0B4J235 113 aa5.04□□□□□ -1.6
CNOT4-201ENST00000315544 ASB16-AS1Q495Z4 193 aa5.04□□□□□ -1.6
CNOT4-201ENST00000315544 PRSS2P07478 247 aa5.04□□□□□ -1.6
CNOT4-201ENST00000315544 C3orf84H3BNL1 204 aa5.04□□□□□ -1.6
CNOT4-201ENST00000315544 CMC4P56277 68 aaPredicted RBP5.04□□□□□ -1.6
CNOT4-201ENST00000315544 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
CNOT4-201ENST00000315544 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
CNOT4-201ENST00000315544 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
CNOT4-201ENST00000315544 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
CNOT4-201ENST00000315544 TRGV1A0A0A0MS02 117 aa5.03□□□□□ -1.6
CNOT4-201ENST00000315544 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
CNOT4-201ENST00000315544 Q9HAA7 133 aa5.03□□□□□ -1.6
CNOT4-201ENST00000315544 GAGE12JA6NER3 117 aa5.03□□□□□ -1.6
CNOT4-201ENST00000315544 GAGE4Q13068 117 aa5.03□□□□□ -1.6
CNOT4-201ENST00000315544 BAALC-AS2P0C853 105 aa5.02□□□□□ -1.61
CNOT4-201ENST00000315544 C3orf22Q8N5N4 141 aa5.02□□□□□ -1.61
CNOT4-201ENST00000315544 J3QR89 54 aa5.02□□□□□ -1.61
CNOT4-201ENST00000315544 NPC2P61916 151 aa5.02□□□□□ -1.61
CNOT4-201ENST00000315544 SMIM29Q86T20 159 aa5.02□□□□□ -1.61
CNOT4-201ENST00000315544 COL6A5A8TX70 2615 aa5.01□□□□□ -1.61
CNOT4-201ENST00000315544 TGP01266 2768 aa5.01□□□□□ -1.61
CNOT4-201ENST00000315544 H0YGX0 51 aa5.01□□□□□ -1.61
CNOT4-201ENST00000315544 C9orf116Q5BN46 136 aaPredicted RBP5.01□□□□□ -1.61
CNOT4-201ENST00000315544 COX7CP15954 63 aa5.01□□□□□ -1.61
CNOT4-201ENST00000315544 KRTAP13-1Q8IUC0 172 aa5.01□□□□□ -1.61
CNOT4-201ENST00000315544 STHQ8IWL8 128 aa5.01□□□□□ -1.61
CNOT4-201ENST00000315544 KCNQ1DNQ9H478 68 aa5.01□□□□□ -1.61
CNOT4-201ENST00000315544 WNK1Q9H4A3 2382 aa5□□□□□ -1.61
CNOT4-201ENST00000315544 C11orf44Q8N8P7 122 aa5□□□□□ -1.61
CNOT4-201ENST00000315544 Q9BRP9 147 aa5□□□□□ -1.61
CNOT4-201ENST00000315544 PRO0255Q9UI72 69 aa5□□□□□ -1.61
CNOT4-201ENST00000315544 KLKP1Q107X0 134 aa5□□□□□ -1.61
CNOT4-201ENST00000315544 WWC2-AS2Q96NR7 200 aa5□□□□□ -1.61
CNOT4-201ENST00000315544 H7BZZ5 65 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 GAGE7O76087 117 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 GAGE12FP0CL80 117 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 GAGE12GP0CL81 117 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 GAGE12IP0CL82 117 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 ATRQ13535 2644 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 IGLV8-61A0A075B6I0 122 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 LELP1Q5T871 98 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 KRTAP11-1Q8IUC1 163 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 TRAV13-1A0A0B4J241 112 aa4.99□□□□□ -1.61
CNOT4-201ENST00000315544 NCR3O14931 201 aa4.98□□□□□ -1.61
CNOT4-201ENST00000315544 RPL18AQ02543 176 aaKnown RBP4.98□□□□□ -1.61
CNOT4-201ENST00000315544 SPRR4Q96PI1 79 aa4.98□□□□□ -1.61
CNOT4-201ENST00000315544 UQCRQO14949 82 aa4.98□□□□□ -1.61
CNOT4-201ENST00000315544 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
CNOT4-201ENST00000315544 CASC10Q5T4H9 136 aa4.98□□□□□ -1.61
CNOT4-201ENST00000315544 CHCHD10Q8WYQ3 142 aaPredicted RBP4.98□□□□□ -1.61
CNOT4-201ENST00000315544 OCR1Q9BZK8 76 aa4.98□□□□□ -1.61
CNOT4-201ENST00000315544 Q6ZRP5 223 aa4.97□□□□□ -1.61
CNOT4-201ENST00000315544 SS18L2Q9UHA2 77 aa4.97□□□□□ -1.61
CNOT4-201ENST00000315544 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.61
CNOT4-201ENST00000315544 B5MCH6 92 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 DPH3Q96FX2 82 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 CXCL6P80162 114 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 GAGE2BQ13066 116 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 GAGE2EQ4V326 116 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 C14orf132Q9NPU4 83 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 GAGE2DQ9UEU5 116 aa4.96□□□□□ -1.62
CNOT4-201ENST00000315544 MIFP14174 115 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 LINC00269Q8N2A0 174 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 F8WDY8 70 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 IGKV4-1P06312 121 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 GYPEP15421 78 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 REG3AQ06141 175 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 FAM236AA0A1B0GUQ0 79 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 FAM236BA0A1B0GV22 79 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 ANAPC13Q9BS18 74 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms