RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
SKA3-202ENST00000314759 NDUFC2-KCTD14E9PQ53 114 aa9.13□□□□□ -0.95
SKA3-202ENST00000314759 H7BZZ5 65 aa9.13□□□□□ -0.95
SKA3-202ENST00000314759 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
SKA3-202ENST00000314759 C6orf223Q8N319 242 aa9.13□□□□□ -0.95
SKA3-202ENST00000314759 TRAV10A0A0B4J240 114 aa9.12□□□□□ -0.95
SKA3-202ENST00000314759 DEFB4AO15263 64 aa9.12□□□□□ -0.95
SKA3-202ENST00000314759 Q6ZQT0 140 aa9.12□□□□□ -0.95
SKA3-202ENST00000314759 TRBV10-3A0A0K0K1G6 114 aa9.12□□□□□ -0.95
SKA3-202ENST00000314759 UNQ6190/PRO20217Q6UXQ8 127 aa9.12□□□□□ -0.95
SKA3-202ENST00000314759 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
SKA3-202ENST00000314759 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
SKA3-202ENST00000314759 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
SKA3-202ENST00000314759 HAMPP81172 84 aa9.1□□□□□ -0.95
SKA3-202ENST00000314759 KRTAP10-3P60369 221 aa9.1□□□□□ -0.95
SKA3-202ENST00000314759 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
SKA3-202ENST00000314759 ZNF561-AS1K7EIQ3 104 aa9.09□□□□□ -0.95
SKA3-202ENST00000314759 LINC00482Q8N8I6 264 aa9.09□□□□□ -0.95
SKA3-202ENST00000314759 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
SKA3-202ENST00000314759 VWFP04275 2813 aa9.09□□□□□ -0.95
SKA3-202ENST00000314759 LOC110117498A0A087WWA1 95 aa9.08□□□□□ -0.96
SKA3-202ENST00000314759 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
SKA3-202ENST00000314759 RMI2Q96E14 147 aa9.08□□□□□ -0.96
SKA3-202ENST00000314759 TRAV7A0A075B6U4 112 aa9.08□□□□□ -0.96
SKA3-202ENST00000314759 CYSRT1A8MQ03 144 aa9.08□□□□□ -0.96
SKA3-202ENST00000314759 IGLV6-57P01721 117 aa9.08□□□□□ -0.96
SKA3-202ENST00000314759 Q6ZVQ6 151 aa9.08□□□□□ -0.96
SKA3-202ENST00000314759 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
SKA3-202ENST00000314759 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
SKA3-202ENST00000314759 PDZD2O15018 2839 aa9.07□□□□□ -0.96
SKA3-202ENST00000314759 A0A0J9YWU9 116 aa9.07□□□□□ -0.96
SKA3-202ENST00000314759 IGHV4-30-4P0DP06 118 aa9.07□□□□□ -0.96
SKA3-202ENST00000314759 Q6ZQY7 126 aa9.06□□□□□ -0.96
SKA3-202ENST00000314759 HIVEP2P31629 2446 aa9.06□□□□□ -0.96
SKA3-202ENST00000314759 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
SKA3-202ENST00000314759 SCXQ7RTU7 201 aa9.05□□□□□ -0.96
SKA3-202ENST00000314759 DAD1P61803 113 aa9.04□□□□□ -0.96
SKA3-202ENST00000314759 LINC00336Q6ZUF6 198 aa9.04□□□□□ -0.96
SKA3-202ENST00000314759 MUC7Q8TAX7 377 aa9.04□□□□□ -0.96
SKA3-202ENST00000314759 ITPR2Q14571 2701 aa9.04□□□□□ -0.96
SKA3-202ENST00000314759 KLKP1Q107X0 134 aa9.04□□□□□ -0.96
SKA3-202ENST00000314759 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
SKA3-202ENST00000314759 F8WEM9 126 aa9.03□□□□□ -0.96
SKA3-202ENST00000314759 KLK12Q9UKR0 248 aa9.03□□□□□ -0.96
SKA3-202ENST00000314759 TM2D3Q9BRN9 247 aa9.02□□□□□ -0.96
SKA3-202ENST00000314759 XAGE1AQ9HD64 81 aa9.02□□□□□ -0.97
SKA3-202ENST00000314759 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
SKA3-202ENST00000314759 FP248Q71RG6 208 aaPredicted RBP9.01□□□□□ -0.97
SKA3-202ENST00000314759 TENM4Q6N022 2769 aa9.01□□□□□ -0.97
SKA3-202ENST00000314759 LELP1Q5T871 98 aa9.01□□□□□ -0.97
SKA3-202ENST00000314759 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
SKA3-202ENST00000314759 BCE1O60756 84 aa9.01□□□□□ -0.97
SKA3-202ENST00000314759 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
SKA3-202ENST00000314759 HTN3P15516 51 aa9□□□□□ -0.97
SKA3-202ENST00000314759 GVQW2A0A096LPI5 108 aaPredicted RBP9□□□□□ -0.97
SKA3-202ENST00000314759 PDE6GP18545 87 aa8.99□□□□□ -0.97
SKA3-202ENST00000314759 Q8NAQ8 132 aa8.99□□□□□ -0.97
SKA3-202ENST00000314759 DIRC1Q969H9 104 aa8.99□□□□□ -0.97
SKA3-202ENST00000314759 LINC00474Q9P2X8 69 aa8.99□□□□□ -0.97
SKA3-202ENST00000314759 FASNP49327 2511 aaKnown RBP8.98□□□□□ -0.97
SKA3-202ENST00000314759 H3BQ85 93 aa8.98□□□□□ -0.97
SKA3-202ENST00000314759 ZNF73O43830 326 aaPredicted RBP8.98□□□□□ -0.97
SKA3-202ENST00000314759 CXCL6P80162 114 aa8.98□□□□□ -0.97
SKA3-202ENST00000314759 HELZ2Q9BYK8 2649 aaKnown RBP8.97□□□□□ -0.97
SKA3-202ENST00000314759 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
SKA3-202ENST00000314759 APOC4P55056 127 aa8.97□□□□□ -0.97
SKA3-202ENST00000314759 MRAPQ8TCY5 172 aa8.97□□□□□ -0.97
SKA3-202ENST00000314759 SMR3AQ99954 134 aa8.97□□□□□ -0.97
SKA3-202ENST00000314759 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.96□□□□□ -0.97
SKA3-202ENST00000314759 COX7BP24311 80 aa8.95□□□□□ -0.98
SKA3-202ENST00000314759 ELOF1P60002 83 aaKnown RBP8.95□□□□□ -0.98
SKA3-202ENST00000314759 SPART-AS1P0CW21 52 aa8.95□□□□□ -0.98
SKA3-202ENST00000314759 MIFP14174 115 aa8.95□□□□□ -0.98
SKA3-202ENST00000314759 PRO0628Q9UI54 55 aa8.95□□□□□ -0.98
SKA3-202ENST00000314759 SMIM26A0A096LP01 95 aa8.94□□□□□ -0.98
SKA3-202ENST00000314759 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
SKA3-202ENST00000314759 Q8N9L7 120 aa8.94□□□□□ -0.98
SKA3-202ENST00000314759 NOTCH2Q04721 2471 aa8.94□□□□□ -0.98
SKA3-202ENST00000314759 VPREB1P12018 145 aa8.93□□□□□ -0.98
SKA3-202ENST00000314759 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
SKA3-202ENST00000314759 TENM1Q9UKZ4 2725 aa8.92□□□□□ -0.98
SKA3-202ENST00000314759 HECTD1Q9ULT8 2610 aa8.92□□□□□ -0.98
SKA3-202ENST00000314759 NREPQ16612 68 aa8.92□□□□□ -0.98
SKA3-202ENST00000314759 HIVEP1P15822 2718 aa8.91□□□□□ -0.98
SKA3-202ENST00000314759 BPY2O14599 106 aa8.91□□□□□ -0.98
SKA3-202ENST00000314759 CAMK2N2Q96S95 79 aa8.91□□□□□ -0.98
SKA3-202ENST00000314759 UNC79Q9P2D8 2635 aa8.9□□□□□ -0.98
SKA3-202ENST00000314759 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.99
SKA3-202ENST00000314759 TMEM254Q8TBM7 123 aa8.9□□□□□ -0.99
SKA3-202ENST00000314759 C1orf43Q9BWL3 253 aa8.9□□□□□ -0.99
SKA3-202ENST00000314759 TRRAPQ9Y4A5 3859 aa8.9□□□□□ -0.99
SKA3-202ENST00000314759 M0R378 163 aa8.88□□□□□ -0.99
SKA3-202ENST00000314759 Q6ZRU5 148 aa8.88□□□□□ -0.99
SKA3-202ENST00000314759 WFDC10BQ8IUB3 73 aa8.88□□□□□ -0.99
SKA3-202ENST00000314759 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
SKA3-202ENST00000314759 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
SKA3-202ENST00000314759 KRTAP26-1Q6PEX3 210 aa8.88□□□□□ -0.99
SKA3-202ENST00000314759 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
SKA3-202ENST00000314759 NDUFC1O43677 76 aa8.87□□□□□ -0.99
SKA3-202ENST00000314759 J3QKU1 62 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms