RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DEFB1P60022 68 aa6.17□□□□□ -1.42
COL6A5-202ENST00000312481 ITPR2Q14571 2701 aa6.16□□□□□ -1.42
COL6A5-202ENST00000312481 ACYP2P14621 99 aa6.16□□□□□ -1.42
COL6A5-202ENST00000312481 WFDC10BQ8IUB3 73 aa6.16□□□□□ -1.42
COL6A5-202ENST00000312481 UNC79Q9P2D8 2635 aa6.16□□□□□ -1.42
COL6A5-202ENST00000312481 WIPF1O43516 503 aa6.16□□□□□ -1.42
COL6A5-202ENST00000312481 SLPIP03973 132 aa6.16□□□□□ -1.42
COL6A5-202ENST00000312481 H0Y9P7 68 aa6.15□□□□□ -1.42
COL6A5-202ENST00000312481 Q6ZRX8 168 aa6.15□□□□□ -1.42
COL6A5-202ENST00000312481 SNURFQ9Y675 71 aa6.15□□□□□ -1.42
COL6A5-202ENST00000312481 NOTCH1P46531 2555 aa6.15□□□□□ -1.42
COL6A5-202ENST00000312481 LOC101927531A0A1B0GV80 90 aa6.15□□□□□ -1.42
COL6A5-202ENST00000312481 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.42
COL6A5-202ENST00000312481 TEP1Q99973 2627 aaKnown RBP6.15□□□□□ -1.42
COL6A5-202ENST00000312481 LITAFQ99732 161 aa6.15□□□□□ -1.42
COL6A5-202ENST00000312481 UNQ6190/PRO20217Q6UXQ8 127 aa6.15□□□□□ -1.43
COL6A5-202ENST00000312481 TRAV22A0A0B4J277 110 aa6.14□□□□□ -1.43
COL6A5-202ENST00000312481 Q6ZRP5 223 aa6.14□□□□□ -1.43
COL6A5-202ENST00000312481 ZNF843Q8N446 348 aa6.14□□□□□ -1.43
COL6A5-202ENST00000312481 PROK1P58294 105 aa6.13□□□□□ -1.43
COL6A5-202ENST00000312481 FSHBP01225 129 aa6.13□□□□□ -1.43
COL6A5-202ENST00000312481 STAB1Q9NY15 2570 aa6.13□□□□□ -1.43
COL6A5-202ENST00000312481 OBSCN-AS1Q96MR7 158 aa6.13□□□□□ -1.43
COL6A5-202ENST00000312481 LYPD5Q6UWN5 251 aa6.13□□□□□ -1.43
COL6A5-202ENST00000312481 C8orf87E5RJ46 101 aa6.13□□□□□ -1.43
COL6A5-202ENST00000312481 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
COL6A5-202ENST00000312481 LRCOL1A6NCL2 159 aa6.12□□□□□ -1.43
COL6A5-202ENST00000312481 DNAH10OSP0CZ25 163 aa6.12□□□□□ -1.43
COL6A5-202ENST00000312481 TLX1NBP0CAT3 122 aa6.12□□□□□ -1.43
COL6A5-202ENST00000312481 Q9BRP9 147 aa6.11□□□□□ -1.43
COL6A5-202ENST00000312481 C19orf84I3L1E1 186 aa6.11□□□□□ -1.43
COL6A5-202ENST00000312481 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
COL6A5-202ENST00000312481 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
COL6A5-202ENST00000312481 Q6ZTC4 211 aa6.11□□□□□ -1.43
COL6A5-202ENST00000312481 A8MZ25 164 aa6.11□□□□□ -1.43
COL6A5-202ENST00000312481 KCNQ1DNQ9H478 68 aa6.11□□□□□ -1.43
COL6A5-202ENST00000312481 HRCT1Q6UXD1 115 aa6.1□□□□□ -1.43
COL6A5-202ENST00000312481 C16orf90A8MZG2 172 aa6.1□□□□□ -1.43
COL6A5-202ENST00000312481 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.43
COL6A5-202ENST00000312481 TEX15Q9BXT5 2789 aa6.09□□□□□ -1.43
COL6A5-202ENST00000312481 PRR34Q9NV39 138 aa6.09□□□□□ -1.43
COL6A5-202ENST00000312481 MAP1AP78559 2803 aaPredicted RBP6.09□□□□□ -1.43
COL6A5-202ENST00000312481 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.44
COL6A5-202ENST00000312481 DEFB4AO15263 64 aa6.08□□□□□ -1.44
COL6A5-202ENST00000312481 DMBT1Q9UGM3 2413 aaPredicted RBP6.08□□□□□ -1.44
COL6A5-202ENST00000312481 C1orf64Q8NEQ6 169 aa6.08□□□□□ -1.44
COL6A5-202ENST00000312481 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
COL6A5-202ENST00000312481 MDFIQ99750 246 aa6.08□□□□□ -1.44
COL6A5-202ENST00000312481 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
COL6A5-202ENST00000312481 A0A096LNI7 61 aa6.07□□□□□ -1.44
COL6A5-202ENST00000312481 NSD1Q96L73 2696 aaPredicted RBP6.07□□□□□ -1.44
COL6A5-202ENST00000312481 A8MWP4 228 aa6.07□□□□□ -1.44
COL6A5-202ENST00000312481 SETXQ7Z333 2677 aaKnown RBP6.06□□□□□ -1.44
COL6A5-202ENST00000312481 COL6A5A8TX70 2615 aa6.06□□□□□ -1.44
COL6A5-202ENST00000312481 WFDC13Q8IUB5 93 aa6.06□□□□□ -1.44
COL6A5-202ENST00000312481 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
COL6A5-202ENST00000312481 BAHCC1Q9P281 2608 aa6.05□□□□□ -1.44
COL6A5-202ENST00000312481 LOC100131303A0A0U1RQF7 123 aa6.05□□□□□ -1.44
COL6A5-202ENST00000312481 SCXQ7RTU7 201 aa6.04□□□□□ -1.44
COL6A5-202ENST00000312481 Q6ZSN1 163 aa6.04□□□□□ -1.44
COL6A5-202ENST00000312481 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
COL6A5-202ENST00000312481 LINC00528Q8N1L1 170 aa6.03□□□□□ -1.44
COL6A5-202ENST00000312481 C6orf48Q9UBA6 75 aa6.03□□□□□ -1.44
COL6A5-202ENST00000312481 AVPP01185 164 aa6.03□□□□□ -1.44
COL6A5-202ENST00000312481 EDN2P20800 178 aa6.03□□□□□ -1.44
COL6A5-202ENST00000312481 IGLV5-37A0A075B6J1 123 aa6.02□□□□□ -1.44
COL6A5-202ENST00000312481 A0A087WSZ3 146 aa6.02□□□□□ -1.45
COL6A5-202ENST00000312481 PRR15Q8IV56 129 aa6.02□□□□□ -1.45
COL6A5-202ENST00000312481 A0A087WVE0 104 aa6.02□□□□□ -1.45
COL6A5-202ENST00000312481 SOSTDC1Q6X4U4 206 aa6.02□□□□□ -1.45
COL6A5-202ENST00000312481 PRM2P04554 102 aa6.02□□□□□ -1.45
COL6A5-202ENST00000312481 CD164Q04900 197 aa6.02□□□□□ -1.45
COL6A5-202ENST00000312481 PLA2G2AP14555 144 aa6.01□□□□□ -1.45
COL6A5-202ENST00000312481 CSNK1G2-AS1Q8NCQ2 148 aa6.01□□□□□ -1.45
COL6A5-202ENST00000312481 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
COL6A5-202ENST00000312481 C10orf99Q6UWK7 81 aa6.01□□□□□ -1.45
COL6A5-202ENST00000312481 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
COL6A5-202ENST00000312481 Q1T7F1 81 aa6.01□□□□□ -1.45
COL6A5-202ENST00000312481 C22orf24Q9Y442 160 aa6□□□□□ -1.45
COL6A5-202ENST00000312481 Q6ZRU5 148 aa6□□□□□ -1.45
COL6A5-202ENST00000312481 FAM218AQ96MZ4 157 aa6□□□□□ -1.45
COL6A5-202ENST00000312481 Q8NAQ8 132 aa5.99□□□□□ -1.45
COL6A5-202ENST00000312481 IGLV5-48A0A075B6I7 105 aa5.99□□□□□ -1.45
COL6A5-202ENST00000312481 KIAA0087Q14695 138 aa5.99□□□□□ -1.45
COL6A5-202ENST00000312481 A0A1B0GU69 56 aa5.99□□□□□ -1.45
COL6A5-202ENST00000312481 H7BZZ5 65 aa5.98□□□□□ -1.45
COL6A5-202ENST00000312481 A8MUN3 132 aa5.98□□□□□ -1.45
COL6A5-202ENST00000312481 C9orf116Q5BN46 136 aaPredicted RBP5.98□□□□□ -1.45
COL6A5-202ENST00000312481 INAFM1C9JVW0 142 aa5.97□□□□□ -1.45
COL6A5-202ENST00000312481 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
COL6A5-202ENST00000312481 X6R8D5 127 aa5.97□□□□□ -1.45
COL6A5-202ENST00000312481 SMIM29Q86T20 159 aa5.96□□□□□ -1.45
COL6A5-202ENST00000312481 IGLV9-49A0A0B4J1Y8 123 aa5.96□□□□□ -1.45
COL6A5-202ENST00000312481 A0A1W2PPR1 153 aa5.96□□□□□ -1.45
COL6A5-202ENST00000312481 LINC00476Q8WZB0 136 aa5.96□□□□□ -1.45
COL6A5-202ENST00000312481 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
COL6A5-202ENST00000312481 SPAG11AQ6PDA7 123 aa5.96□□□□□ -1.46
COL6A5-202ENST00000312481 C18orf65Q6ZTR6 163 aa5.96□□□□□ -1.46
COL6A5-202ENST00000312481 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
COL6A5-202ENST00000312481 UQCR11O14957 56 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms