RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
SCFD1-201ENST00000311943 MAP1LC3CQ9BXW4 147 aa7.34□□□□□ -1.23
SCFD1-201ENST00000311943 LINC00158P58513 81 aa7.34□□□□□ -1.24
SCFD1-201ENST00000311943 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-201ENST00000311943 COA6Q5JTJ3 125 aaKnown RBP7.33□□□□□ -1.24
SCFD1-201ENST00000311943 IGKV2-28A0A075B6P5 120 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 IGKV2D-28P01615 120 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 IGLV7-43P04211 117 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 KRTDAPP60985 99 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 MRPL55Q7Z7F7 128 aaKnown RBP7.32□□□□□ -1.24
SCFD1-201ENST00000311943 ATOH7Q8N100 152 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 NDUFA12Q9UI09 145 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 IGKV2D-26A0A0A0MRZ7 120 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 VPREB1P12018 145 aa7.32□□□□□ -1.24
SCFD1-201ENST00000311943 MIR7-3HGQ8N6C7 128 aa7.31□□□□□ -1.24
SCFD1-201ENST00000311943 J3QQQ9 107 aa7.3□□□□□ -1.24
SCFD1-201ENST00000311943 LEPROTO15243 131 aa7.3□□□□□ -1.24
SCFD1-201ENST00000311943 PLNP26678 52 aa7.3□□□□□ -1.24
SCFD1-201ENST00000311943 MEIG1Q5JSS6 88 aa7.3□□□□□ -1.24
SCFD1-201ENST00000311943 NPC2P61916 151 aa7.3□□□□□ -1.24
SCFD1-201ENST00000311943 LINC01545Q5VT33 79 aa7.3□□□□□ -1.24
SCFD1-201ENST00000311943 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
SCFD1-201ENST00000311943 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
SCFD1-201ENST00000311943 ADAMTSL4-AS1Q5T5F5 129 aa7.28□□□□□ -1.24
SCFD1-201ENST00000311943 OXTP01178 125 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 HIST3H2BBQ8N257 126 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 HMCN2Q8NDA2 5059 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 NCR3O14931 201 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 COX17Q14061 63 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 NKAPP1Q8N9T2 125 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
SCFD1-201ENST00000311943 IGLV5-37A0A075B6J1 123 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 E9PLD3 99 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 LGALS3P17931 250 aaKnown RBP7.26□□□□□ -1.25
SCFD1-201ENST00000311943 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 PET117Q6UWS5 81 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 BOD1L2Q8IYS8 172 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 LINC01600Q96MT4 127 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 HIST1H2BLQ99880 126 aa7.26□□□□□ -1.25
SCFD1-201ENST00000311943 MYMXA0A1B0GTQ4 84 aa7.25□□□□□ -1.25
SCFD1-201ENST00000311943 PRLHP81277 87 aa7.25□□□□□ -1.25
SCFD1-201ENST00000311943 PRR26Q8N8Z3 221 aa7.25□□□□□ -1.25
SCFD1-201ENST00000311943 IGLV1-50A0A075B6I6 118 aa7.25□□□□□ -1.25
SCFD1-201ENST00000311943 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
SCFD1-201ENST00000311943 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
SCFD1-201ENST00000311943 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
SCFD1-201ENST00000311943 TP73-AS1Q9UF72 201 aa7.25□□□□□ -1.25
SCFD1-201ENST00000311943 LBHQ53QV2 105 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-201ENST00000311943 H0Y9J4 135 aa7.23□□□□□ -1.25
SCFD1-201ENST00000311943 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
SCFD1-201ENST00000311943 HERVK_113P61574 105 aa7.23□□□□□ -1.25
SCFD1-201ENST00000311943 M0R378 163 aa7.23□□□□□ -1.25
SCFD1-201ENST00000311943 HERV-K104P63124 156 aa7.23□□□□□ -1.25
SCFD1-201ENST00000311943 ZNF861PO60384 105 aa7.22□□□□□ -1.25
SCFD1-201ENST00000311943 LITAFQ99732 161 aa7.22□□□□□ -1.25
SCFD1-201ENST00000311943 BCE1O60756 84 aa7.22□□□□□ -1.25
SCFD1-201ENST00000311943 PCP2Q8IVA1 136 aa7.22□□□□□ -1.25
SCFD1-201ENST00000311943 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
SCFD1-201ENST00000311943 SFTA2Q6UW10 78 aa7.21□□□□□ -1.26
SCFD1-201ENST00000311943 KRTAP13-1Q8IUC0 172 aa7.21□□□□□ -1.26
SCFD1-201ENST00000311943 TRBV10-3A0A0K0K1G6 114 aa7.2□□□□□ -1.26
SCFD1-201ENST00000311943 ZNF815PA8K554 130 aa7.2□□□□□ -1.26
SCFD1-201ENST00000311943 NMUP48645 174 aa7.2□□□□□ -1.26
SCFD1-201ENST00000311943 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
SCFD1-201ENST00000311943 REG3GQ6UW15 175 aa7.2□□□□□ -1.26
SCFD1-201ENST00000311943 DIRC1Q969H9 104 aa7.2□□□□□ -1.26
SCFD1-201ENST00000311943 A0A087X002 238 aa7.19□□□□□ -1.26
SCFD1-201ENST00000311943 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
SCFD1-201ENST00000311943 S100A2P29034 98 aa7.18□□□□□ -1.26
SCFD1-201ENST00000311943 C5orf52A6NGY3 159 aa7.18□□□□□ -1.26
SCFD1-201ENST00000311943 S100A6P06703 90 aa7.18□□□□□ -1.26
SCFD1-201ENST00000311943 UBR4Q5T4S7 5183 aa7.17□□□□□ -1.26
SCFD1-201ENST00000311943 UBE2AP49459 152 aa7.17□□□□□ -1.26
SCFD1-201ENST00000311943 LPAP08519 4548 aa7.15□□□□□ -1.26
SCFD1-201ENST00000311943 LOC107984156A0A0G2JMH3 177 aa7.15□□□□□ -1.27
SCFD1-201ENST00000311943 RPL28P46779 137 aaKnown RBP7.15□□□□□ -1.27
SCFD1-201ENST00000311943 ARL17AQ8IVW1 177 aa7.15□□□□□ -1.27
SCFD1-201ENST00000311943 LINC00308Q8TCZ7 52 aa7.15□□□□□ -1.27
SCFD1-201ENST00000311943 HIGD2AQ9BW72 106 aa7.15□□□□□ -1.27
SCFD1-201ENST00000311943 C20orf202A1L168 122 aa7.14□□□□□ -1.27
SCFD1-201ENST00000311943 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-201ENST00000311943 LRP2P98164 4655 aa7.13□□□□□ -1.27
SCFD1-201ENST00000311943 LINC00587B1AMM8 73 aa7.13□□□□□ -1.27
SCFD1-201ENST00000311943 MIEN1Q9BRT3 115 aa7.13□□□□□ -1.27
SCFD1-201ENST00000311943 ERC2-IT1O76042 136 aa7.12□□□□□ -1.27
SCFD1-201ENST00000311943 DDTP30046 118 aa7.12□□□□□ -1.27
SCFD1-201ENST00000311943 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
SCFD1-201ENST00000311943 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
SCFD1-201ENST00000311943 SPRR1AP35321 89 aa7.11□□□□□ -1.27
SCFD1-201ENST00000311943 KCNQ1DNQ9H478 68 aa7.11□□□□□ -1.27
SCFD1-201ENST00000311943 SCGB1D1O95968 90 aa7.11□□□□□ -1.27
SCFD1-201ENST00000311943 SCGB1D4Q6XE38 83 aa7.11□□□□□ -1.27
SCFD1-201ENST00000311943 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
SCFD1-201ENST00000311943 IGLV6-57P01721 117 aa7.1□□□□□ -1.27
SCFD1-201ENST00000311943 LINC00337Q8N6G1 96 aa7.1□□□□□ -1.27
SCFD1-201ENST00000311943 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
SCFD1-201ENST00000311943 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms