RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SPTBN4Q9H254 2564 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 NUPR2A6NF83 97 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 CEBPZOSA8MTT3 80 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 RBX1P62877 108 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 CCL28Q9NRJ3 127 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 PATE4P0C8F1 98 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 ADIRFQ15847 76 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 SPATA45Q537H7 98 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 IGF2BP2-AS1Q96M15 143 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 IGLV1-51P01701 117 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 MGST1P10620 155 aaKnown RBP0.67□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP19-2Q3LHN2 52 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 SMIM11BQ8TCY0 68 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 NXT2Q9NPJ8 142 aaKnown RBP0.67□□□□□ -2.3
CEP290-201ENST00000309041 NOTCH3Q9UM47 2321 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 PIGYQ3MUY2 71 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 RBM12B-AS1Q9P1G2 102 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 VPS13AQ96RL7 3174 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 DEFB113Q30KQ7 82 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 CENPWQ5EE01 88 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 Q6ZRN7 208 aaPredicted RBP0.67□□□□□ -2.3
CEP290-201ENST00000309041 C20orf78Q9BR46 151 aa0.67□□□□□ -2.3
CEP290-201ENST00000309041 DOPEY1Q5JWR5 2465 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 GVQW2A0A096LPI5 108 aaPredicted RBP0.66□□□□□ -2.3
CEP290-201ENST00000309041 ZNF73O43830 326 aaPredicted RBP0.66□□□□□ -2.3
CEP290-201ENST00000309041 AKAP6Q13023 2319 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 C19orf71A6NCJ1 209 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 SPINK4O60575 86 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 FBN1P35555 2871 aaKnown RBP0.66□□□□□ -2.3
CEP290-201ENST00000309041 A0A1W2PNM2 257 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 IGKV1-17P01599 117 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 PRB2P02812 416 aaPredicted RBP0.66□□□□□ -2.3
CEP290-201ENST00000309041 CCL1P22362 96 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 APOC4P55056 127 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 NANOS3P60323 173 aaKnown RBP0.66□□□□□ -2.3
CEP290-201ENST00000309041 Q8NBF4 154 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 SPRR4Q96PI1 79 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 KNL1Q8NG31 2342 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 PI3P19957 117 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 PLNP26678 52 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 IFI27P40305 119 aaPredicted RBP0.66□□□□□ -2.3
CEP290-201ENST00000309041 Q8N6K4 173 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 CCL26Q9Y258 94 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 FREM1Q5H8C1 2179 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 MALRD1Q5VYJ5 2156 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 CEP250Q9BV73 2442 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 IGKV6-21A0A0C4DH24 114 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 IGKV3-20P01619 116 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 NDPQ00604 133 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 OTOSQ8NHW6 89 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 ATXN7L3BQ96GX2 97 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 TRBV7-4A0A0J9YYF1 115 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 A0A1B0GVG6 124 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 NNATQ16517 81 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP5-1Q6L8H4 278 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 ANAPC13Q9BS18 74 aa0.66□□□□□ -2.3
CEP290-201ENST00000309041 TNCP24821 2201 aa0.65□□□□□ -2.3
CEP290-201ENST00000309041 SPTBN1Q01082 2364 aaKnown RBP0.65□□□□□ -2.3
CEP290-201ENST00000309041 COX6B1P14854 86 aa0.65□□□□□ -2.3
CEP290-201ENST00000309041 TMEM256Q8N2U0 113 aa0.65□□□□□ -2.3
CEP290-201ENST00000309041 MEGF8Q7Z7M0 2845 aa0.65□□□□□ -2.3
CEP290-201ENST00000309041 H3BNG1 76 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 PGLYRP1O75594 196 aaPredicted RBP0.65□□□□□ -2.31
CEP290-201ENST00000309041 LYPD6Q86Y78 171 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 USF3Q68DE3 2245 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 IGKV1-9A0A0C4DH69 117 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 PROK1P58294 105 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 K7EP34 96 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 LST1O00453 97 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 SUPT4H1P63272 117 aaKnown RBP0.65□□□□□ -2.31
CEP290-201ENST00000309041 CDC42SE2Q9NRR3 84 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 EPG5Q9HCE0 2579 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 SNURFLB1AK76 121 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 LEPROTO15243 131 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 MYMXA0A1B0GTQ4 84 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 INSP01308 110 aa0.65□□□□□ -2.31
CEP290-201ENST00000309041 M0QZ58 72 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 C18orf32Q8TCD1 76 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 LYSTQ99698 3801 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 C2orf70A6NJV1 201 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 IGKV3-11P04433 115 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 SMIM2Q9BVW6 85 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 LINC00574Q9H8X3 128 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 FAM186AA6NE01 2351 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 A0A1B0GWA3 101 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 H7BZZ5 65 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 SPRR2BP35325 72 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 TSPEAR-AS2P59090 65 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 LINC00311Q8N616 119 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 RPS10P5Q9NQ39 176 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 KLK12Q9UKR0 248 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 FRYLO94915 3013 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 CFAP47Q6ZTR5 3102 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 DNAH10OSP0CZ25 163 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 RPL37P61927 97 aaKnown RBP0.64□□□□□ -2.31
CEP290-201ENST00000309041 TEP1Q99973 2627 aaKnown RBP0.64□□□□□ -2.31
CEP290-201ENST00000309041 PATE2Q6UY27 113 aa0.64□□□□□ -2.31
CEP290-201ENST00000309041 HOPXQ9BPY8 73 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms