RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FAM218AQ96MZ4 157 aa9.65□□□□□ -0.87
PRKCB-201ENST00000303531 C6orf48Q9UBA6 75 aa9.64□□□□□ -0.87
PRKCB-201ENST00000303531 ANKRD17O75179 2603 aaKnown RBP9.64□□□□□ -0.87
PRKCB-201ENST00000303531 SPINK1P00995 79 aa9.63□□□□□ -0.87
PRKCB-201ENST00000303531 PRO0461Q9UI25 63 aa9.63□□□□□ -0.87
PRKCB-201ENST00000303531 SMIM29Q86T20 159 aa9.63□□□□□ -0.87
PRKCB-201ENST00000303531 X6R8D5 127 aa9.62□□□□□ -0.87
PRKCB-201ENST00000303531 hDV103S1A0JD37 113 aa9.61□□□□□ -0.87
PRKCB-201ENST00000303531 CHD8Q9HCK8 2581 aa9.61□□□□□ -0.87
PRKCB-201ENST00000303531 COL27A1Q8IZC6 1860 aaPredicted RBP9.61□□□□□ -0.87
PRKCB-201ENST00000303531 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
PRKCB-201ENST00000303531 CRYGAP11844 174 aa9.61□□□□□ -0.87
PRKCB-201ENST00000303531 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
PRKCB-201ENST00000303531 F8P00451 2351 aa9.59□□□□□ -0.87
PRKCB-201ENST00000303531 COL4A2P08572 1712 aa9.59□□□□□ -0.87
PRKCB-201ENST00000303531 ELOF1P60002 83 aaKnown RBP9.57□□□□□ -0.88
PRKCB-201ENST00000303531 LIMD2Q9BT23 127 aa9.56□□□□□ -0.88
PRKCB-201ENST00000303531 MDFIQ99750 246 aa9.55□□□□□ -0.88
PRKCB-201ENST00000303531 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
PRKCB-201ENST00000303531 Q6ZQT0 140 aa9.53□□□□□ -0.88
PRKCB-201ENST00000303531 GOLGB1Q14789 3259 aaKnown RBP9.53□□□□□ -0.88
PRKCB-201ENST00000303531 FASNP49327 2511 aaKnown RBP9.53□□□□□ -0.88
PRKCB-201ENST00000303531 H3BNG1 76 aa9.52□□□□□ -0.88
PRKCB-201ENST00000303531 IGKV2D-30A0A075B6S6 120 aa9.52□□□□□ -0.89
PRKCB-201ENST00000303531 IGKV2-30P06310 120 aa9.52□□□□□ -0.89
PRKCB-201ENST00000303531 MOBPQ13875 183 aa9.52□□□□□ -0.89
PRKCB-201ENST00000303531 POLQO75417 2590 aa9.5□□□□□ -0.89
PRKCB-201ENST00000303531 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
PRKCB-201ENST00000303531 Q6ZRX8 168 aa9.5□□□□□ -0.89
PRKCB-201ENST00000303531 BCE1O60756 84 aa9.49□□□□□ -0.89
PRKCB-201ENST00000303531 ACANP16112 2415 aa9.49□□□□□ -0.89
PRKCB-201ENST00000303531 LITAFQ99732 161 aa9.49□□□□□ -0.89
PRKCB-201ENST00000303531 LINC00476Q8WZB0 136 aa9.48□□□□□ -0.89
PRKCB-201ENST00000303531 PHF5AQ7RTV0 110 aaKnown RBP9.48□□□□□ -0.89
PRKCB-201ENST00000303531 FSHBP01225 129 aa9.48□□□□□ -0.89
PRKCB-201ENST00000303531 Q8NBF4 154 aa9.48□□□□□ -0.89
PRKCB-201ENST00000303531 PCSK5Q92824 1860 aa9.48□□□□□ -0.89
PRKCB-201ENST00000303531 A0A1B0GW54 56 aa9.48□□□□□ -0.89
PRKCB-201ENST00000303531 TP53AIP1Q9HCN2 124 aa9.48□□□□□ -0.89
PRKCB-201ENST00000303531 Q8NAQ8 132 aa9.47□□□□□ -0.89
PRKCB-201ENST00000303531 KLK9Q2XQG4 91 aa9.47□□□□□ -0.89
PRKCB-201ENST00000303531 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
PRKCB-201ENST00000303531 ST20-AS1Q8NBB2 130 aa9.46□□□□□ -0.89
PRKCB-201ENST00000303531 C7orf65Q6ZTY9 151 aa9.46□□□□□ -0.9
PRKCB-201ENST00000303531 PRRC2CQ9Y520 2896 aaKnown RBP9.45□□□□□ -0.9
PRKCB-201ENST00000303531 EPM2AB3EWF7 344 aa9.44□□□□□ -0.9
PRKCB-201ENST00000303531 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
PRKCB-201ENST00000303531 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
PRKCB-201ENST00000303531 PRO0628Q9UI54 55 aa9.42□□□□□ -0.9
PRKCB-201ENST00000303531 GVQW2A0A096LPI5 108 aaPredicted RBP9.42□□□□□ -0.9
PRKCB-201ENST00000303531 A0A1B0GU69 56 aa9.42□□□□□ -0.9
PRKCB-201ENST00000303531 C16orf90A8MZG2 172 aa9.42□□□□□ -0.9
PRKCB-201ENST00000303531 C4orf26Q17RF5 130 aa9.42□□□□□ -0.9
PRKCB-201ENST00000303531 KRTAP24-1Q3LI83 254 aa9.42□□□□□ -0.9
PRKCB-201ENST00000303531 Q6ZRP5 223 aa9.41□□□□□ -0.9
PRKCB-201ENST00000303531 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
PRKCB-201ENST00000303531 ACYP2P14621 99 aa9.41□□□□□ -0.9
PRKCB-201ENST00000303531 RPL37AP61513 92 aaKnown RBP9.4□□□□□ -0.9
PRKCB-201ENST00000303531 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.91
PRKCB-201ENST00000303531 IGLV6-57P01721 117 aa9.39□□□□□ -0.91
PRKCB-201ENST00000303531 SPAG11AQ6PDA7 123 aa9.39□□□□□ -0.91
PRKCB-201ENST00000303531 RTL8CO15255 209 aa9.38□□□□□ -0.91
PRKCB-201ENST00000303531 VPREB1P12018 145 aa9.38□□□□□ -0.91
PRKCB-201ENST00000303531 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
PRKCB-201ENST00000303531 TRAV22A0A0B4J277 110 aa9.38□□□□□ -0.91
PRKCB-201ENST00000303531 H3BPC8 53 aa9.37□□□□□ -0.91
PRKCB-201ENST00000303531 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
PRKCB-201ENST00000303531 USP24Q9UPU5 2620 aa9.34□□□□□ -0.91
PRKCB-201ENST00000303531 LINC00313P59037 77 aa9.34□□□□□ -0.91
PRKCB-201ENST00000303531 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
PRKCB-201ENST00000303531 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
PRKCB-201ENST00000303531 CSNK1G2-AS1Q8NCQ2 148 aa9.34□□□□□ -0.91
PRKCB-201ENST00000303531 DNAH10OSP0CZ25 163 aa9.33□□□□□ -0.92
PRKCB-201ENST00000303531 SERTAD4-AS1Q5TG53 156 aa9.33□□□□□ -0.92
PRKCB-201ENST00000303531 K7EQZ3 153 aa9.3□□□□□ -0.92
PRKCB-201ENST00000303531 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
PRKCB-201ENST00000303531 IGLV1-50A0A075B6I6 118 aa9.28□□□□□ -0.92
PRKCB-201ENST00000303531 A8MWP4 228 aa9.28□□□□□ -0.92
PRKCB-201ENST00000303531 KCNQ1DNQ9H478 68 aa9.27□□□□□ -0.92
PRKCB-201ENST00000303531 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
PRKCB-201ENST00000303531 BPTFQ12830 3046 aa9.25□□□□□ -0.93
PRKCB-201ENST00000303531 IGLV8-61A0A075B6I0 122 aa9.24□□□□□ -0.93
PRKCB-201ENST00000303531 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
PRKCB-201ENST00000303531 Q96NJ1 140 aa9.24□□□□□ -0.93
PRKCB-201ENST00000303531 LOC101927531A0A1B0GV80 90 aa9.23□□□□□ -0.93
PRKCB-201ENST00000303531 PRR34Q9NV39 138 aa9.23□□□□□ -0.93
PRKCB-201ENST00000303531 ERC2-IT1O76042 136 aa9.23□□□□□ -0.93
PRKCB-201ENST00000303531 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
PRKCB-201ENST00000303531 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
PRKCB-201ENST00000303531 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
PRKCB-201ENST00000303531 IGFL1Q6UW32 110 aa9.21□□□□□ -0.93
PRKCB-201ENST00000303531 DNAH12Q6ZR08 3092 aa9.21□□□□□ -0.94
PRKCB-201ENST00000303531 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
PRKCB-201ENST00000303531 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
PRKCB-201ENST00000303531 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
PRKCB-201ENST00000303531 A0A096LNT2 108 aa9.19□□□□□ -0.94
PRKCB-201ENST00000303531 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
PRKCB-201ENST00000303531 C9orf129Q5T035 196 aaKnown RBP9.19□□□□□ -0.94
PRKCB-201ENST00000303531 COA5Q86WW8 74 aa9.18□□□□□ -0.94
PRKCB-201ENST00000303531 EPG5Q9HCE0 2579 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms